RNA–Protein interactions for RNA: ENST00000273179.9

CTDSPL-201, Transcript of CTD small phosphatase like, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-201ENST00000273179 ARSDP51689 593 aa9.16□□□□□ -0.94
CTDSPL-201ENST00000273179 CASP9P55211 416 aa9.16□□□□□ -0.94
CTDSPL-201ENST00000273179 CDR2Q01850 454 aa9.16□□□□□ -0.94
CTDSPL-201ENST00000273179 TYRO3Q06418 890 aa9.16□□□□□ -0.94
CTDSPL-201ENST00000273179 ZNF786Q8N393 782 aa9.16□□□□□ -0.94
CTDSPL-201ENST00000273179 LZTR1Q8N653 840 aa9.16□□□□□ -0.94
CTDSPL-201ENST00000273179 NAT14Q8WUY8 206 aa9.16□□□□□ -0.94
CTDSPL-201ENST00000273179 CRB3Q9BUF7 120 aa9.16□□□□□ -0.94
CTDSPL-201ENST00000273179 SLC13A1Q9BZW2 595 aa9.16□□□□□ -0.94
CTDSPL-201ENST00000273179 C6orf62Q9GZU0 229 aaPredicted RBP9.16□□□□□ -0.94
CTDSPL-201ENST00000273179 Q9H521 79 aa9.16□□□□□ -0.94
CTDSPL-201ENST00000273179 PSMC3IPQ9P2W1 217 aaPredicted RBP9.16□□□□□ -0.94
CTDSPL-201ENST00000273179 AASSQ9UDR5 926 aa9.16□□□□□ -0.94
CTDSPL-201ENST00000273179 GGT7Q9UJ14 662 aa9.16□□□□□ -0.94
CTDSPL-201ENST00000273179 ARHGAP23Q9P227 1491 aa9.16□□□□□ -0.94
CTDSPL-201ENST00000273179 GPR75-ASB3A0A0A6YYF3 556 aa9.16□□□□□ -0.94
CTDSPL-201ENST00000273179 SPOPO43791 374 aa9.16□□□□□ -0.94
CTDSPL-201ENST00000273179 UFL1O94874 794 aa9.16□□□□□ -0.94
CTDSPL-201ENST00000273179 APOL3O95236 402 aa9.16□□□□□ -0.94
CTDSPL-201ENST00000273179 FAM107AO95990 144 aa9.16□□□□□ -0.94
CTDSPL-201ENST00000273179 MAT2AP31153 395 aaKnown RBP9.16□□□□□ -0.94
CTDSPL-201ENST00000273179 ESRRGP62508 458 aa9.16□□□□□ -0.94
CTDSPL-201ENST00000273179 CTTNQ14247 550 aaKnown RBP9.16□□□□□ -0.94
CTDSPL-201ENST00000273179 USF2Q15853 346 aaPredicted RBP9.16□□□□□ -0.94
CTDSPL-201ENST00000273179 TIGD2Q4W5G0 525 aa9.16□□□□□ -0.94
CTDSPL-201ENST00000273179 PITRM1Q5JRX3 1037 aa9.16□□□□□ -0.94
CTDSPL-201ENST00000273179 CADM3Q8N126 398 aa9.16□□□□□ -0.94
CTDSPL-201ENST00000273179 CARFQ8N187 725 aa9.16□□□□□ -0.94
CTDSPL-201ENST00000273179 MTMR14Q8NCE2 650 aa9.16□□□□□ -0.94
CTDSPL-201ENST00000273179 HDAC11Q96DB2 347 aa9.16□□□□□ -0.94
CTDSPL-201ENST00000273179 TRMT2BQ96GJ1 504 aaKnown RBP9.16□□□□□ -0.94
CTDSPL-201ENST00000273179 TCF25Q9BQ70 676 aa9.16□□□□□ -0.94
CTDSPL-201ENST00000273179 RNF19AQ9NV58 838 aa9.16□□□□□ -0.94
CTDSPL-201ENST00000273179 PTTG2Q9NZH5 202 aa9.16□□□□□ -0.94
CTDSPL-201ENST00000273179 SMG5Q9UPR3 1016 aaKnown RBP9.16□□□□□ -0.94
CTDSPL-201ENST00000273179 ASB3Q9Y575 518 aa9.16□□□□□ -0.94
CTDSPL-201ENST00000273179 CLRN2A0PK11 232 aa9.15□□□□□ -0.94
CTDSPL-201ENST00000273179 EVPLLA8MZ36 301 aa9.15□□□□□ -0.94
CTDSPL-201ENST00000273179 TCP11X1B4DZS4 312 aa9.15□□□□□ -0.94
CTDSPL-201ENST00000273179 SLC25A17O43808 307 aa9.15□□□□□ -0.94
CTDSPL-201ENST00000273179 PRDM1O75626 825 aa9.15□□□□□ -0.94
CTDSPL-201ENST00000273179 PALMO75781 387 aa9.15□□□□□ -0.94
CTDSPL-201ENST00000273179 GOSR1O95249 250 aa9.15□□□□□ -0.94
CTDSPL-201ENST00000273179 ADH1CP00326 375 aa9.15□□□□□ -0.94
CTDSPL-201ENST00000273179 NR1D1P20393 614 aa9.15□□□□□ -0.94
CTDSPL-201ENST00000273179 CSTF2P33240 577 aaKnown RBP eCLIP9.15□□□□□ -0.949e-8■■■■■ 27.8
CTDSPL-201ENST00000273179 SLC26A3P40879 764 aa9.15□□□□□ -0.94
CTDSPL-201ENST00000273179 HTRA4P83105 476 aaPredicted RBP9.15□□□□□ -0.94
CTDSPL-201ENST00000273179 GLO1Q04760 184 aa9.15□□□□□ -0.94
CTDSPL-201ENST00000273179 MCMDC2Q4G0Z9 681 aa9.15□□□□□ -0.94
CTDSPL-201ENST00000273179 LDLRAD1Q5T700 205 aa9.15□□□□□ -0.94
CTDSPL-201ENST00000273179 VWA5B1Q5TIE3 1220 aa9.15□□□□□ -0.94
CTDSPL-201ENST00000273179 LAYNQ6UX15 382 aa9.15□□□□□ -0.94
CTDSPL-201ENST00000273179 CDH26Q8IXH8 852 aa9.15□□□□□ -0.94
CTDSPL-201ENST00000273179 ZNF669Q96BR6 464 aaPredicted RBP9.15□□□□□ -0.94
CTDSPL-201ENST00000273179 MSANTD3Q96H12 275 aa9.15□□□□□ -0.94
CTDSPL-201ENST00000273179 VCPIP1Q96JH7 1222 aa9.15□□□□□ -0.94
CTDSPL-201ENST00000273179 ASCC2Q9H1I8 757 aaPredicted RBP9.15□□□□□ -0.94
CTDSPL-201ENST00000273179 SP110Q9HB58 689 aa9.15□□□□□ -0.94
CTDSPL-201ENST00000273179 PCDHGB4Q9UN71 923 aa9.15□□□□□ -0.94
CTDSPL-201ENST00000273179 SLC12A4Q9UP95 1085 aa9.15□□□□□ -0.94
CTDSPL-201ENST00000273179 ENTPD4Q9Y227 616 aa9.15□□□□□ -0.94
CTDSPL-201ENST00000273179 NFE2L3Q9Y4A8 694 aa9.15□□□□□ -0.94
CTDSPL-201ENST00000273179 RAD54BQ9Y620 910 aa9.15□□□□□ -0.94
CTDSPL-201ENST00000273179 PRAMEF22A3QJZ6 481 aa9.15□□□□□ -0.94
CTDSPL-201ENST00000273179 SERPINB2P05120 415 aa9.15□□□□□ -0.94
CTDSPL-201ENST00000273179 IL6P05231 212 aa9.15□□□□□ -0.94
CTDSPL-201ENST00000273179 HNF1AP20823 631 aa9.15□□□□□ -0.94
CTDSPL-201ENST00000273179 ACSL1P33121 698 aa9.15□□□□□ -0.94
CTDSPL-201ENST00000273179 HOXD13P35453 343 aa9.15□□□□□ -0.94
CTDSPL-201ENST00000273179 HARS2P49590 506 aaKnown RBP9.15□□□□□ -0.94
CTDSPL-201ENST00000273179 CLCN4P51793 760 aa9.15□□□□□ -0.94
CTDSPL-201ENST00000273179 NUP107P57740 925 aa9.15□□□□□ -0.94
CTDSPL-201ENST00000273179 XRCC4Q13426 336 aa9.15□□□□□ -0.94
CTDSPL-201ENST00000273179 SERINC3Q13530 473 aa9.15□□□□□ -0.94
CTDSPL-201ENST00000273179 SMCO1Q147U7 214 aa9.15□□□□□ -0.94
CTDSPL-201ENST00000273179 UAP1Q16222 522 aaPredicted RBP9.15□□□□□ -0.94
CTDSPL-201ENST00000273179 SLC22A25Q6T423 547 aa9.15□□□□□ -0.94
CTDSPL-201ENST00000273179 NRSN1Q8IZ57 195 aa9.15□□□□□ -0.94
CTDSPL-201ENST00000273179 PYROXD1Q8WU10 500 aa9.15□□□□□ -0.94
CTDSPL-201ENST00000273179 SLC2A13Q96QE2 648 aa9.15□□□□□ -0.94
CTDSPL-201ENST00000273179 UBXN6Q9BZV1 441 aa9.15□□□□□ -0.94
CTDSPL-201ENST00000273179 PHAXQ9H814 394 aaKnown RBP9.15□□□□□ -0.94
CTDSPL-201ENST00000273179 INTS7Q9NVH2 962 aaKnown RBP9.15□□□□□ -0.94
CTDSPL-201ENST00000273179 AKAP12Q02952 1782 aa9.15□□□□□ -0.94
CTDSPL-201ENST00000273179 SLIT1O75093 1534 aa9.15□□□□□ -0.94
CTDSPL-201ENST00000273179 USP31Q70CQ4 1352 aa9.15□□□□□ -0.94
CTDSPL-201ENST00000273179 PASKQ96RG2 1323 aa9.15□□□□□ -0.94
CTDSPL-201ENST00000273179 I3L4J1 428 aa9.15□□□□□ -0.94
CTDSPL-201ENST00000273179 MAP2K7O14733 419 aa9.15□□□□□ -0.94
CTDSPL-201ENST00000273179 GATCO43716 136 aaKnown RBP9.15□□□□□ -0.94
CTDSPL-201ENST00000273179 FHP07954 510 aa9.15□□□□□ -0.94
CTDSPL-201ENST00000273179 UAP1L1Q3KQV9 507 aa9.15□□□□□ -0.94
CTDSPL-201ENST00000273179 ATG16L1Q676U5 607 aa9.15□□□□□ -0.94
CTDSPL-201ENST00000273179 ANKS3Q6ZW76 656 aa9.15□□□□□ -0.94
CTDSPL-201ENST00000273179 FRA10AC1Q70Z53 315 aa9.15□□□□□ -0.94
CTDSPL-201ENST00000273179 CYP2U1Q7Z449 544 aa9.15□□□□□ -0.94
CTDSPL-201ENST00000273179 TPRA1Q86W33 373 aa9.15□□□□□ -0.94
CTDSPL-201ENST00000273179 CA5BP1Q8WTZ4 195 aa9.15□□□□□ -0.94
CTDSPL-201ENST00000273179 DGCR14Q96DF8 476 aaKnown RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms