RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 FAM72CH0Y354 149 aa12.6□□□□□ -0.39
SDE2-201ENST00000272091 HOXA2O43364 376 aa12.6□□□□□ -0.39
SDE2-201ENST00000272091 RNF40O75150 1001 aa12.6□□□□□ -0.39
SDE2-201ENST00000272091 MAP3K6O95382 1288 aa12.6□□□□□ -0.39
SDE2-201ENST00000272091 IGLV3-25P01717 112 aa12.6□□□□□ -0.39
SDE2-201ENST00000272091 PMS2P54278 862 aa12.6□□□□□ -0.39
SDE2-201ENST00000272091 DEUP1Q05D60 604 aa12.6□□□□□ -0.39
SDE2-201ENST00000272091 CTXN3Q4LDR2 81 aa12.6□□□□□ -0.39
SDE2-201ENST00000272091 FAM72AQ5TYM5 149 aa12.6□□□□□ -0.39
SDE2-201ENST00000272091 BSPRYQ5W0U4 402 aa12.6□□□□□ -0.39
SDE2-201ENST00000272091 FAM72DQ6L9T8 149 aa12.6□□□□□ -0.39
SDE2-201ENST00000272091 FAM72BQ86X60 149 aa12.6□□□□□ -0.39
SDE2-201ENST00000272091 MAP7D3Q8IWC1 876 aa12.6□□□□□ -0.39
SDE2-201ENST00000272091 CCDC89Q8N998 374 aa12.6□□□□□ -0.39
SDE2-201ENST00000272091 UBLCP1Q8WVY7 318 aaPredicted RBP12.6□□□□□ -0.39
SDE2-201ENST00000272091 PGLYRP2Q96PD5 576 aa12.6□□□□□ -0.39
SDE2-201ENST00000272091 COLEC11Q9BWP8 271 aa12.6□□□□□ -0.39
SDE2-201ENST00000272091 MRPL9Q9BYD2 267 aaKnown RBP12.6□□□□□ -0.39
SDE2-201ENST00000272091 SEMA4AQ9H3S1 761 aa12.6□□□□□ -0.39
SDE2-201ENST00000272091 RC3H2Q9HBD1 1191 aaKnown RBP12.6□□□□□ -0.39
SDE2-201ENST00000272091 PCDH9Q9HC56 1237 aa12.6□□□□□ -0.39
SDE2-201ENST00000272091 STAP1Q9ULZ2 295 aa12.6□□□□□ -0.39
SDE2-201ENST00000272091 SGK1O00141 431 aa12.59□□□□□ -0.39
SDE2-201ENST00000272091 APOL1O14791 398 aa12.59□□□□□ -0.39
SDE2-201ENST00000272091 UPP2O95045 317 aa12.59□□□□□ -0.39
SDE2-201ENST00000272091 TGM2P21980 687 aa12.59□□□□□ -0.39
SDE2-201ENST00000272091 GRIK1P39086 918 aa12.59□□□□□ -0.39
SDE2-201ENST00000272091 ARTNQ5T4W7 220 aa12.59□□□□□ -0.39
SDE2-201ENST00000272091 NCBP2-AS2Q69YL0 99 aa12.59□□□□□ -0.39
SDE2-201ENST00000272091 LRRC43Q8N309 656 aa12.59□□□□□ -0.39
SDE2-201ENST00000272091 C11orf49Q9H6J7 331 aa12.59□□□□□ -0.39
SDE2-201ENST00000272091 USP29Q9HBJ7 922 aa12.59□□□□□ -0.39
SDE2-201ENST00000272091 OSER1Q9NX31 292 aa12.59□□□□□ -0.39
SDE2-201ENST00000272091 SF3B1O75533 1304 aaKnown RBP eCLIP12.59□□□□□ -0.391e-7■■■■■ 172.3
SDE2-201ENST00000272091 DNALI1O14645 258 aaPredicted RBP12.59□□□□□ -0.39
SDE2-201ENST00000272091 SHBGP04278 402 aa12.59□□□□□ -0.39
SDE2-201ENST00000272091 ZNF844Q08AG5 666 aa12.59□□□□□ -0.39
SDE2-201ENST00000272091 CALCOCO2Q13137 446 aa12.59□□□□□ -0.39
SDE2-201ENST00000272091 SEMA3BQ13214 749 aa12.59□□□□□ -0.39
SDE2-201ENST00000272091 TFDP2Q14188 446 aa12.59□□□□□ -0.39
SDE2-201ENST00000272091 SPDYCQ5MJ68 293 aa12.59□□□□□ -0.39
SDE2-201ENST00000272091 RNASEH2BQ5TBB1 312 aaKnown RBP12.59□□□□□ -0.39
SDE2-201ENST00000272091 TAC4Q86UU9 113 aa12.59□□□□□ -0.39
SDE2-201ENST00000272091 RNF168Q8IYW5 571 aaPredicted RBP12.59□□□□□ -0.39
SDE2-201ENST00000272091 MAK16Q9BXY0 300 aaKnown RBP12.59□□□□□ -0.39
SDE2-201ENST00000272091 NMUR1Q9HB89 426 aa12.59□□□□□ -0.39
SDE2-201ENST00000272091 RBP3P10745 1247 aa12.59□□□□□ -0.39
SDE2-201ENST00000272091 DESP17661 470 aa12.59□□□□□ -0.39
SDE2-201ENST00000272091 USP46P62068 366 aa12.59□□□□□ -0.39
SDE2-201ENST00000272091 GBE1Q04446 702 aa12.59□□□□□ -0.39
SDE2-201ENST00000272091 DDR2Q16832 855 aa12.59□□□□□ -0.39
SDE2-201ENST00000272091 ZC3H18Q86VM9 953 aaKnown RBP12.59□□□□□ -0.39
SDE2-201ENST00000272091 DCP1BQ8IZD4 617 aaKnown RBP12.59□□□□□ -0.39
SDE2-201ENST00000272091 ATAD1Q8NBU5 361 aa12.59□□□□□ -0.39
SDE2-201ENST00000272091 ANAPC5Q9UJX4 755 aa12.59□□□□□ -0.39
SDE2-201ENST00000272091 FBXW11Q9UKB1 542 aa12.59□□□□□ -0.39
SDE2-201ENST00000272091 SOAT2O75908 522 aa12.58□□□□□ -0.4
SDE2-201ENST00000272091 AMPD1P23109 780 aa12.58□□□□□ -0.4
SDE2-201ENST00000272091 RPL22P35268 128 aaKnown RBP12.58□□□□□ -0.4
SDE2-201ENST00000272091 DEFB103AP81534 67 aa12.58□□□□□ -0.4
SDE2-201ENST00000272091 SCAPQ12770 1279 aa12.58□□□□□ -0.4
SDE2-201ENST00000272091 GPS1Q13098 491 aa12.58□□□□□ -0.4
SDE2-201ENST00000272091 PRSS55Q6UWB4 352 aaPredicted RBP12.58□□□□□ -0.4
SDE2-201ENST00000272091 LRIG3Q6UXM1 1119 aa12.58□□□□□ -0.4
SDE2-201ENST00000272091 PSTKQ8IV42 348 aaKnown RBP12.58□□□□□ -0.4
SDE2-201ENST00000272091 FAM71DQ8N9W8 422 aa12.58□□□□□ -0.4
SDE2-201ENST00000272091 ANKLE1Q8NAG6 615 aa12.58□□□□□ -0.4
SDE2-201ENST00000272091 P3H4Q92791 437 aa12.58□□□□□ -0.4
SDE2-201ENST00000272091 ZNF689Q96CS4 500 aaPredicted RBP12.58□□□□□ -0.4
SDE2-201ENST00000272091 FUBP3Q96I24 572 aaKnown RBP eCLIP12.58□□□□□ -0.41e-6■■■■□ 25.5
SDE2-201ENST00000272091 FARP1Q9Y4F1 1045 aaPredicted RBP12.58□□□□□ -0.4
SDE2-201ENST00000272091 GAD2Q05329 585 aa12.58□□□□□ -0.4
SDE2-201ENST00000272091 DQX1Q8TE96 717 aaKnown RBP12.58□□□□□ -0.4
SDE2-201ENST00000272091 NTAN1Q96AB6 310 aa12.58□□□□□ -0.4
SDE2-201ENST00000272091 ARHGEF4Q9NR80 690 aa12.58□□□□□ -0.4
SDE2-201ENST00000272091 DNAJC17Q9NVM6 304 aaKnown RBP12.58□□□□□ -0.4
SDE2-201ENST00000272091 CAPN9O14815 690 aa12.58□□□□□ -0.4
SDE2-201ENST00000272091 ADAM12O43184 909 aa12.58□□□□□ -0.4
SDE2-201ENST00000272091 ADRA1BP35368 520 aa12.58□□□□□ -0.4
SDE2-201ENST00000272091 CXCR3P49682 368 aa12.58□□□□□ -0.4
SDE2-201ENST00000272091 MTMR3Q13615 1198 aa12.58□□□□□ -0.4
SDE2-201ENST00000272091 DPYSQ14117 519 aa12.58□□□□□ -0.4
SDE2-201ENST00000272091 IKBKEQ14164 716 aa12.58□□□□□ -0.4
SDE2-201ENST00000272091 ZNF280DQ6N043 979 aa12.58□□□□□ -0.4
SDE2-201ENST00000272091 RNF19BQ6ZMZ0 732 aa12.58□□□□□ -0.4
SDE2-201ENST00000272091 CCDC33Q8N5R6 958 aa12.58□□□□□ -0.4
SDE2-201ENST00000272091 C8orf48Q96LL4 319 aa12.58□□□□□ -0.4
SDE2-201ENST00000272091 SLC9A7Q96T83 725 aa12.58□□□□□ -0.4
SDE2-201ENST00000272091 PABPC3Q9H361 631 aaKnown RBP12.58□□□□□ -0.4
SDE2-201ENST00000272091 MTRF1LQ9UGC7 380 aaKnown RBP12.58□□□□□ -0.4
SDE2-201ENST00000272091 HEY1Q9Y5J3 304 aa12.58□□□□□ -0.4
SDE2-201ENST00000272091 SNX10Q9Y5X0 201 aa12.58□□□□□ -0.4
SDE2-201ENST00000272091 OR6C75A6NL08 312 aa12.57□□□□□ -0.4
SDE2-201ENST00000272091 MCF2LO15068 1137 aa12.57□□□□□ -0.4
SDE2-201ENST00000272091 RARGP13631 454 aa12.57□□□□□ -0.4
SDE2-201ENST00000272091 YWHAGP61981 247 aaKnown RBP eCLIP12.57□□□□□ -0.4
SDE2-201ENST00000272091 ROR1Q01973 937 aa12.57□□□□□ -0.4
SDE2-201ENST00000272091 IFRD2Q12894 506 aaPredicted RBP12.57□□□□□ -0.4
SDE2-201ENST00000272091 ANKRD22Q5VYY1 191 aa12.57□□□□□ -0.4
SDE2-201ENST00000272091 SCN4BQ8IWT1 228 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms