RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 BCAT1P54687 386 aa15.19■□□□□ 0.02
TRAFD1-201ENST00000257604 MRPS6P82932 125 aaKnown RBP15.19■□□□□ 0.02
TRAFD1-201ENST00000257604 SDHAF4Q5VUM1 108 aa15.19■□□□□ 0.02
TRAFD1-201ENST00000257604 PLD5Q8N7P1 536 aa15.19■□□□□ 0.02
TRAFD1-201ENST00000257604 SLC35B2Q8TB61 432 aa15.19■□□□□ 0.02
TRAFD1-201ENST00000257604 ADAM2Q99965 735 aa15.19■□□□□ 0.02
TRAFD1-201ENST00000257604 KATNAL1Q9BW62 490 aa15.19■□□□□ 0.02
TRAFD1-201ENST00000257604 STMN4Q9H169 189 aaPredicted RBP15.19■□□□□ 0.02
TRAFD1-201ENST00000257604 PLEKHA5Q9HAU0 1116 aa15.19■□□□□ 0.02
TRAFD1-201ENST00000257604 IKBKGQ9Y6K9 419 aa15.19■□□□□ 0.02
TRAFD1-201ENST00000257604 MBLAC1A4D2B0 266 aaPredicted RBP15.18■□□□□ 0.02
TRAFD1-201ENST00000257604 KCNK1O00180 336 aa15.18■□□□□ 0.02
TRAFD1-201ENST00000257604 CHRNA1P02708 482 aa15.18■□□□□ 0.02
TRAFD1-201ENST00000257604 PTPN1P18031 435 aaKnown RBP15.18■□□□□ 0.02
TRAFD1-201ENST00000257604 ARL4CP56559 192 aa15.18■□□□□ 0.02
TRAFD1-201ENST00000257604 CAP1Q01518 475 aa15.18■□□□□ 0.02
TRAFD1-201ENST00000257604 OLIG2Q13516 323 aa15.18■□□□□ 0.02
TRAFD1-201ENST00000257604 SV2CQ496J9 727 aa15.18■□□□□ 0.02
TRAFD1-201ENST00000257604 RNASEH2BQ5TBB1 312 aaKnown RBP15.18■□□□□ 0.02
TRAFD1-201ENST00000257604 BZW1Q7L1Q6 419 aaKnown RBP15.18■□□□□ 0.02
TRAFD1-201ENST00000257604 IGDCC3Q8IVU1 814 aa15.18■□□□□ 0.02
TRAFD1-201ENST00000257604 ANKRD52Q8NB46 1076 aa15.18■□□□□ 0.02
TRAFD1-201ENST00000257604 SUN1O94901 812 aa15.18■□□□□ 0.02
TRAFD1-201ENST00000257604 SRGAP2BP0DMP2 458 aa15.18■□□□□ 0.02
TRAFD1-201ENST00000257604 BDNFP23560 247 aa15.18■□□□□ 0.02
TRAFD1-201ENST00000257604 CACNA2D1P54289 1103 aa15.18■□□□□ 0.02
TRAFD1-201ENST00000257604 SPARCL1Q14515 664 aa15.18■□□□□ 0.02
TRAFD1-201ENST00000257604 DENND5BQ6ZUT9 1274 aa15.18■□□□□ 0.02
TRAFD1-201ENST00000257604 RFX8Q6ZV50 586 aa15.18■□□□□ 0.02
TRAFD1-201ENST00000257604 RSPH3Q86UC2 560 aa15.18■□□□□ 0.02
TRAFD1-201ENST00000257604 PPM1NQ8N819 430 aa15.18■□□□□ 0.02
TRAFD1-201ENST00000257604 TNIP3Q96KP6 325 aa15.18■□□□□ 0.02
TRAFD1-201ENST00000257604 ULBP1Q9BZM6 244 aa15.18■□□□□ 0.02
TRAFD1-201ENST00000257604 EBF2Q9HAK2 575 aa15.18■□□□□ 0.02
TRAFD1-201ENST00000257604 ETNK1Q9HBU6 452 aa15.18■□□□□ 0.02
TRAFD1-201ENST00000257604 PCDH9Q9HC56 1237 aa15.18■□□□□ 0.02
TRAFD1-201ENST00000257604 ZMYND8Q9ULU4 1186 aaPredicted RBP15.18■□□□□ 0.02
TRAFD1-201ENST00000257604 PADI3Q9ULW8 664 aa15.18■□□□□ 0.02
TRAFD1-201ENST00000257604 TTC3P53804 2025 aa15.18■□□□□ 0.02
TRAFD1-201ENST00000257604 ARL5CA6NH57 179 aa15.18■□□□□ 0.02
TRAFD1-201ENST00000257604 CSPG5O95196 566 aa15.18■□□□□ 0.02
TRAFD1-201ENST00000257604 GSTA1P08263 222 aa15.18■□□□□ 0.02
TRAFD1-201ENST00000257604 TARSP26639 723 aaKnown RBP15.18■□□□□ 0.02
TRAFD1-201ENST00000257604 SESN2P58004 480 aaPredicted RBP15.18■□□□□ 0.02
TRAFD1-201ENST00000257604 COPS2P61201 443 aa15.18■□□□□ 0.02
TRAFD1-201ENST00000257604 CAV1Q03135 178 aa15.18■□□□□ 0.02
TRAFD1-201ENST00000257604 KIAA0319Q5VV43 1072 aa15.18■□□□□ 0.02
TRAFD1-201ENST00000257604 VSTM1Q6UX27 236 aa15.18■□□□□ 0.02
TRAFD1-201ENST00000257604 KDELC2Q7Z4H8 507 aa15.18■□□□□ 0.02
TRAFD1-201ENST00000257604 POLNQ7Z5Q5 900 aa15.18■□□□□ 0.02
TRAFD1-201ENST00000257604 SCN4BQ8IWT1 228 aa15.18■□□□□ 0.02
TRAFD1-201ENST00000257604 PPIL6Q8IXY8 311 aa15.18■□□□□ 0.02
TRAFD1-201ENST00000257604 CMASQ8NFW8 434 aaPredicted RBP15.18■□□□□ 0.02
TRAFD1-201ENST00000257604 GPR152Q8TDT2 470 aa15.18■□□□□ 0.02
TRAFD1-201ENST00000257604 KHSRPQ92945 711 aaKnown RBP eCLIP15.18■□□□□ 0.02
TRAFD1-201ENST00000257604 NOP53Q9NZM5 478 aaKnown RBP15.18■□□□□ 0.02
TRAFD1-201ENST00000257604 CNTN3Q9P232 1028 aa15.18■□□□□ 0.02
TRAFD1-201ENST00000257604 USP12O75317 370 aa15.17■□□□□ 0.02
TRAFD1-201ENST00000257604 ITGAVP06756 1048 aa15.17■□□□□ 0.02
TRAFD1-201ENST00000257604 HTRA3P83110 453 aa15.17■□□□□ 0.02
TRAFD1-201ENST00000257604 TFDP2Q14188 446 aa15.17■□□□□ 0.02
TRAFD1-201ENST00000257604 ZBTB6Q15916 424 aa15.17■□□□□ 0.02
TRAFD1-201ENST00000257604 CES3Q6UWW8 571 aa15.17■□□□□ 0.02
TRAFD1-201ENST00000257604 SPATA21Q7Z572 469 aa15.17■□□□□ 0.02
TRAFD1-201ENST00000257604 NIPA2Q8N8Q9 360 aa15.17■□□□□ 0.02
TRAFD1-201ENST00000257604 TTC13Q8NBP0 860 aa15.17■□□□□ 0.02
TRAFD1-201ENST00000257604 TGS1Q96RS0 853 aaKnown RBP15.17■□□□□ 0.02
TRAFD1-201ENST00000257604 MTG1Q9BT17 334 aaPredicted RBP15.17■□□□□ 0.02
TRAFD1-201ENST00000257604 TRABDQ9H4I3 376 aa15.17■□□□□ 0.02
TRAFD1-201ENST00000257604 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.17■□□□□ 0.02
TRAFD1-201ENST00000257604 PIRO00625 290 aa15.17■□□□□ 0.02
TRAFD1-201ENST00000257604 NRP1O14786 923 aa15.17■□□□□ 0.02
TRAFD1-201ENST00000257604 CDH16O75309 829 aa15.17■□□□□ 0.02
TRAFD1-201ENST00000257604 MOCS2O96007 188 aaPredicted RBP15.17■□□□□ 0.02
TRAFD1-201ENST00000257604 DNAJC3Q13217 504 aa15.17■□□□□ 0.02
TRAFD1-201ENST00000257604 KCNT2Q6UVM3 1135 aa15.17■□□□□ 0.02
TRAFD1-201ENST00000257604 GPRIN1Q7Z2K8 1008 aa15.17■□□□□ 0.02
TRAFD1-201ENST00000257604 LRRC52Q8N7C0 313 aa15.17■□□□□ 0.02
TRAFD1-201ENST00000257604 SLCO2A1Q92959 643 aa15.17■□□□□ 0.02
TRAFD1-201ENST00000257604 TMEM209Q96SK2 561 aa15.17■□□□□ 0.02
TRAFD1-201ENST00000257604 SLCO1B3Q9NPD5 702 aa15.17■□□□□ 0.02
TRAFD1-201ENST00000257604 CFAP73A6NFT4 308 aa15.16■□□□□ 0.02
TRAFD1-201ENST00000257604 ITGB1P05556 798 aa15.16■□□□□ 0.02
TRAFD1-201ENST00000257604 KRT4P19013 534 aa15.16■□□□□ 0.02
TRAFD1-201ENST00000257604 ARL4AP40617 200 aa15.16■□□□□ 0.02
TRAFD1-201ENST00000257604 MSH2P43246 934 aa15.16■□□□□ 0.02
TRAFD1-201ENST00000257604 KCNN1Q92952 543 aa15.16■□□□□ 0.02
TRAFD1-201ENST00000257604 APOL2Q9BQE5 337 aa15.16■□□□□ 0.02
TRAFD1-201ENST00000257604 VRTNQ9H8Y1 702 aa15.16■□□□□ 0.02
TRAFD1-201ENST00000257604 UBP1Q9NZI7 540 aa15.16■□□□□ 0.02
TRAFD1-201ENST00000257604 NKX1-2Q9UD57 310 aaPredicted RBP15.16■□□□□ 0.02
TRAFD1-201ENST00000257604 PRRC2BQ5JSZ5 2229 aaKnown RBP15.16■□□□□ 0.02
TRAFD1-201ENST00000257604 YJEFN3A6XGL0 299 aa15.16■□□□□ 0.02
TRAFD1-201ENST00000257604 KBTBD13C9JR72 458 aa15.16■□□□□ 0.02
TRAFD1-201ENST00000257604 E7ENQ6 273 aa15.16■□□□□ 0.02
TRAFD1-201ENST00000257604 FCGRTP55899 365 aa15.16■□□□□ 0.02
TRAFD1-201ENST00000257604 MGAT5Q09328 741 aa15.16■□□□□ 0.02
TRAFD1-201ENST00000257604 SLC10A2Q12908 348 aaPredicted RBP15.16■□□□□ 0.02
TRAFD1-201ENST00000257604 MORF4L2Q15014 288 aa15.16■□□□□ 0.02
TRAFD1-201ENST00000257604 BOLA3Q53S33 107 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms