RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 ABHD10Q9NUJ1 306 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 NSMCE4AQ9NXX6 385 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 POLR3HQ9Y535 204 aaPredicted RBP6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 PCDHGA1Q9Y5H4 931 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 KIF1AQ12756 1690 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 TAF5LO75529 589 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 SEC24AO95486 1093 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 AGR2O95994 175 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 MT-ND3P03897 115 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 ATP5BP06576 529 aaKnown RBP6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 ABCB1P08183 1280 aaPredicted RBP6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 THEGLP0DJG4 465 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 TMEM11P17152 192 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 SERPINB5P36952 375 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 UBE3CQ15386 1083 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 STXBP2Q15833 593 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 SPDYCQ5MJ68 293 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 IDO2Q6ZQW0 420 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 AGR3Q8TD06 166 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 GATAD2BQ8WXI9 593 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 GCNAQ96QF7 691 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 ARMC7Q9H6L4 198 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 MAGEE1Q9HCI5 957 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 ENTPD7Q9NQZ7 604 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 PCDHA7Q9UN72 937 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 NOX1Q9Y5S8 564 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 UBE4BO95155 1302 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 ABCC12Q96J65 1359 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 KANSL1LA0AUZ9 987 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 A8MUI8 341 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 INPPL1O15357 1258 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 APBA3O96018 575 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 KCNA5P22460 613 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 GDI1P31150 447 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 TBX4P57082 545 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 ERVK-8P63133 956 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 GRSF1Q12849 480 aaKnown RBP eCLIP6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 DLG1Q12959 904 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 KCNJ8Q15842 424 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 DCAF17Q5H9S7 520 aaPredicted RBP6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 KCNT1Q5JUK3 1230 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 ERAP2Q6P179 960 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 OR8H3Q8N146 312 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 TMIEQ8NEW7 156 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 ANKK1Q8NFD2 765 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 OR9Q1Q8NGQ5 310 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 C18orf8Q96DM3 657 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 TCEANC2Q96MN5 208 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 TMEM246Q9BRR3 403 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 ZNF451Q9Y4E5 1061 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 PCDHA13Q9Y5I0 950 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 MST1RQ04912 1400 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 SNX4O95219 450 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 ACSL3O95573 720 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 FAM153BP0C7A2 387 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 PSKH1P11801 424 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 RAB4AP20338 218 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 RPS8P62241 208 aaKnown RBP6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 BFSP2Q13515 415 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 GPATCH4Q5T3I0 446 aaKnown RBP6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 ERMARDQ5T6L9 678 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 CNSTQ6PJW8 725 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 UNC5DQ6UXZ4 953 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 ARHGAP27Q6ZUM4 889 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 SNX20Q7Z614 316 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 RAB43Q86YS6 212 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 SPAG16Q8N0X2 631 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 PSD2Q9BQI7 771 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 SLA2Q9H6Q3 261 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 MAPRE3Q9UPY8 281 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 SYNGAP1Q96PV0 1343 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 FAM187AA6NFU0 413 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 FAM47DPA6NHR8 397 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 CCNT2O60583 730 aaKnown RBP6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 TRIM13O60858 407 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 CDH1P12830 882 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 ATP2B4P23634 1241 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 HARS2P49590 506 aaKnown RBP6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 AP3M2P53677 418 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 PICALMQ13492 652 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 TTI2Q6NXR4 508 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 CHERPQ8IWX8 916 aaKnown RBP6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 ZNF527Q8NB42 609 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 BIN3Q9NQY0 253 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 SLC24A2Q9UI40 661 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 ZNF532Q9HCE3 1301 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 CPDO75976 1380 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 JCADQ9P266 1359 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 H0YIN7 160 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 H3BUI4 141 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 H7C1D1 291 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 K7EPI3 171 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 ECE2O60344 883 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 CSF2RAP15509 400 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 ITGA2P17301 1181 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 PIK3CBP42338 1070 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 CARTPTQ16568 116 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 LIN9Q5TKA1 542 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 C16orf89Q6UX73 402 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 ZNF600Q6ZNG1 722 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms