RNA–Protein interactions for RNA: ENST00000252085.3

PCDHGA12-201, Transcript of protocadherin gamma subfamily A, 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA12, Length 4,747 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12-201ENST00000252085 CATSPER1Q8NEC5 780 aa13.09□□□□□ -0.31
PCDHGA12-201ENST00000252085 BHMTQ93088 406 aa13.09□□□□□ -0.31
PCDHGA12-201ENST00000252085 HES6Q96HZ4 224 aa13.09□□□□□ -0.31
PCDHGA12-201ENST00000252085 ASPSCR1Q9BZE9 553 aa13.09□□□□□ -0.31
PCDHGA12-201ENST00000252085 DSEQ9UL01 958 aa13.09□□□□□ -0.31
PCDHGA12-201ENST00000252085 SH3BP1Q9Y3L3 701 aa13.09□□□□□ -0.31
PCDHGA12-201ENST00000252085 PKP3Q9Y446 797 aa13.09□□□□□ -0.31
PCDHGA12-201ENST00000252085 APOC4-APOC2K7ER74 178 aa13.09□□□□□ -0.31
PCDHGA12-201ENST00000252085 RECQL4O94761 1208 aa13.09□□□□□ -0.31
PCDHGA12-201ENST00000252085 APOC2P02655 101 aa13.09□□□□□ -0.31
PCDHGA12-201ENST00000252085 TNFSF9P41273 254 aa13.09□□□□□ -0.31
PCDHGA12-201ENST00000252085 SLC11A2P49281 568 aa13.09□□□□□ -0.31
PCDHGA12-201ENST00000252085 ALDH7A1P49419 539 aaKnown RBP13.09□□□□□ -0.31
PCDHGA12-201ENST00000252085 MGAT5Q09328 741 aa13.09□□□□□ -0.31
PCDHGA12-201ENST00000252085 MPP3Q13368 585 aa13.09□□□□□ -0.31
PCDHGA12-201ENST00000252085 ZCWPW2Q504Y3 356 aa13.09□□□□□ -0.31
PCDHGA12-201ENST00000252085 SPDYAQ5MJ70 313 aa13.09□□□□□ -0.31
PCDHGA12-201ENST00000252085 LAYNQ6UX15 382 aa13.09□□□□□ -0.31
PCDHGA12-201ENST00000252085 CELF6Q96J87 481 aaKnown RBP13.09□□□□□ -0.31
PCDHGA12-201ENST00000252085 SH3GL1Q99961 368 aa13.09□□□□□ -0.31
PCDHGA12-201ENST00000252085 CINPQ9BW66 212 aaPredicted RBP13.09□□□□□ -0.31
PCDHGA12-201ENST00000252085 TNFSF13BQ9Y275 285 aa13.09□□□□□ -0.31
PCDHGA12-201ENST00000252085 AKAP12Q02952 1782 aa13.09□□□□□ -0.31
PCDHGA12-201ENST00000252085 TM9SF1O15321 606 aa13.08□□□□□ -0.31
PCDHGA12-201ENST00000252085 NFICP08651 508 aa13.08□□□□□ -0.31
PCDHGA12-201ENST00000252085 RGS4P49798 205 aa13.08□□□□□ -0.31
PCDHGA12-201ENST00000252085 ACAP1Q15027 740 aa13.08□□□□□ -0.31
PCDHGA12-201ENST00000252085 PKN2Q16513 984 aaKnown RBP13.08□□□□□ -0.31
PCDHGA12-201ENST00000252085 TIGD7Q6NT04 549 aaPredicted RBP13.08□□□□□ -0.31
PCDHGA12-201ENST00000252085 KIAA0319LQ8IZA0 1049 aa13.08□□□□□ -0.31
PCDHGA12-201ENST00000252085 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.08□□□□□ -0.31
PCDHGA12-201ENST00000252085 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.08□□□□□ -0.31
PCDHGA12-201ENST00000252085 SH3KBP1Q96B97 665 aa13.08□□□□□ -0.31
PCDHGA12-201ENST00000252085 CDT1Q9H211 546 aa13.08□□□□□ -0.31
PCDHGA12-201ENST00000252085 SAE1Q9UBE0 346 aaPredicted RBP13.08□□□□□ -0.31
PCDHGA12-201ENST00000252085 SUPT7LO94864 414 aa13.08□□□□□ -0.32
PCDHGA12-201ENST00000252085 KDELR1P24390 212 aa13.08□□□□□ -0.32
PCDHGA12-201ENST00000252085 TNFRSF8P28908 595 aa13.08□□□□□ -0.32
PCDHGA12-201ENST00000252085 AQP5P55064 265 aa13.08□□□□□ -0.32
PCDHGA12-201ENST00000252085 RPL10AP62906 217 aaKnown RBP13.08□□□□□ -0.32
PCDHGA12-201ENST00000252085 INPP5AQ14642 412 aa13.08□□□□□ -0.32
PCDHGA12-201ENST00000252085 NFE2Q16621 373 aaPredicted RBP13.08□□□□□ -0.32
PCDHGA12-201ENST00000252085 TRIM16LQ309B1 348 aa13.08□□□□□ -0.32
PCDHGA12-201ENST00000252085 AGAP9Q5VTM2 703 aa13.08□□□□□ -0.32
PCDHGA12-201ENST00000252085 TAF2Q6P1X5 1199 aa13.08□□□□□ -0.32
PCDHGA12-201ENST00000252085 MTDHQ86UE4 582 aaKnown RBP13.08□□□□□ -0.32
PCDHGA12-201ENST00000252085 DYRK4Q9NR20 520 aa13.08□□□□□ -0.32
PCDHGA12-201ENST00000252085 DNAJC16Q9Y2G8 782 aa13.08□□□□□ -0.32
PCDHGA12-201ENST00000252085 SNX5Q9Y5X3 404 aa13.08□□□□□ -0.32
PCDHGA12-201ENST00000252085 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.08□□□□□ -0.32
PCDHGA12-201ENST00000252085 KCNK1O00180 336 aa13.08□□□□□ -0.32
PCDHGA12-201ENST00000252085 CNTFP26441 200 aa13.08□□□□□ -0.32
PCDHGA12-201ENST00000252085 PTPN7P35236 360 aa13.08□□□□□ -0.32
PCDHGA12-201ENST00000252085 SFSWAPQ12872 951 aaKnown RBP13.08□□□□□ -0.32
PCDHGA12-201ENST00000252085 ZNF177Q13360 481 aaPredicted RBP13.08□□□□□ -0.32
PCDHGA12-201ENST00000252085 OVOS1Q6IE37 1185 aa13.08□□□□□ -0.32
PCDHGA12-201ENST00000252085 MRNIPQ6NTE8 343 aa13.08□□□□□ -0.32
PCDHGA12-201ENST00000252085 PCSK9Q8NBP7 692 aaKnown RBP13.08□□□□□ -0.32
PCDHGA12-201ENST00000252085 ADAM32Q8TC27 787 aa13.08□□□□□ -0.32
PCDHGA12-201ENST00000252085 TCP10LQ8TDR4 215 aa13.08□□□□□ -0.32
PCDHGA12-201ENST00000252085 HTR3CQ8WXA8 447 aa13.08□□□□□ -0.32
PCDHGA12-201ENST00000252085 TMEM169Q96HH4 297 aa13.08□□□□□ -0.32
PCDHGA12-201ENST00000252085 FICDQ9BVA6 458 aa13.08□□□□□ -0.32
PCDHGA12-201ENST00000252085 KDM4CQ9H3R0 1056 aa13.08□□□□□ -0.32
PCDHGA12-201ENST00000252085 MRGBPQ9NV56 204 aa13.08□□□□□ -0.32
PCDHGA12-201ENST00000252085 RUVBL2Q9Y230 463 aaKnown RBP13.08□□□□□ -0.32
PCDHGA12-201ENST00000252085 SIGLEC16A6NMB1 481 aa13.08□□□□□ -0.32
PCDHGA12-201ENST00000252085 F5H5T6 163 aa13.08□□□□□ -0.32
PCDHGA12-201ENST00000252085 NCAM2O15394 837 aa13.08□□□□□ -0.32
PCDHGA12-201ENST00000252085 RALBP11234 206 aa13.08□□□□□ -0.32
PCDHGA12-201ENST00000252085 MAP4P27816 1152 aaKnown RBP13.08□□□□□ -0.32
PCDHGA12-201ENST00000252085 PSEN2P49810 448 aa13.08□□□□□ -0.32
PCDHGA12-201ENST00000252085 RTP1P59025 263 aa13.08□□□□□ -0.32
PCDHGA12-201ENST00000252085 HGSNATQ68CP4 663 aa13.08□□□□□ -0.32
PCDHGA12-201ENST00000252085 KCNT2Q6UVM3 1135 aa13.08□□□□□ -0.32
PCDHGA12-201ENST00000252085 SH3BP5LQ7L8J4 393 aa13.08□□□□□ -0.32
PCDHGA12-201ENST00000252085 UNC45BQ8IWX7 931 aa13.08□□□□□ -0.32
PCDHGA12-201ENST00000252085 ZCCHC9Q8N567 271 aaKnown RBP13.08□□□□□ -0.32
PCDHGA12-201ENST00000252085 FAM81AQ8TBF8 368 aa13.08□□□□□ -0.32
PCDHGA12-201ENST00000252085 SPATA17Q96L03 361 aa13.08□□□□□ -0.32
PCDHGA12-201ENST00000252085 NR1H4Q96RI1 486 aaPredicted RBP13.08□□□□□ -0.32
PCDHGA12-201ENST00000252085 PIH1D1Q9NWS0 290 aaKnown RBP13.08□□□□□ -0.32
PCDHGA12-201ENST00000252085 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.08□□□□□ -0.32
PCDHGA12-201ENST00000252085 PCYOX1Q9UHG3 505 aa13.08□□□□□ -0.32
PCDHGA12-201ENST00000252085 PCDHGB4Q9UN71 923 aa13.08□□□□□ -0.32
PCDHGA12-201ENST00000252085 CNTNAP2Q9UHC6 1331 aa13.08□□□□□ -0.32
PCDHGA12-201ENST00000252085 SLC12A8A0AV02 714 aa13.07□□□□□ -0.32
PCDHGA12-201ENST00000252085 KPNA6O60684 536 aa13.07□□□□□ -0.32
PCDHGA12-201ENST00000252085 SRP72O76094 671 aaKnown RBP13.07□□□□□ -0.32
PCDHGA12-201ENST00000252085 LTN1O94822 1766 aa13.07□□□□□ -0.32
PCDHGA12-201ENST00000252085 GHRP10912 638 aa13.07□□□□□ -0.32
PCDHGA12-201ENST00000252085 PPIL2Q13356 520 aa13.07□□□□□ -0.32
PCDHGA12-201ENST00000252085 CNGA2Q16280 664 aa13.07□□□□□ -0.32
PCDHGA12-201ENST00000252085 DAB2IPQ5VWQ8 1189 aa13.07□□□□□ -0.32
PCDHGA12-201ENST00000252085 IQSEC1Q6DN90 963 aa13.07□□□□□ -0.32
PCDHGA12-201ENST00000252085 C12orf56Q8IXR9 622 aa13.07□□□□□ -0.32
PCDHGA12-201ENST00000252085 TRPM4Q8TD43 1214 aa13.07□□□□□ -0.32
PCDHGA12-201ENST00000252085 ANKRD27Q96NW4 1050 aa13.07□□□□□ -0.32
PCDHGA12-201ENST00000252085 CCDC90BQ9GZT6 254 aa13.07□□□□□ -0.32
PCDHGA12-201ENST00000252085 VANGL2Q9ULK5 521 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms