RNA–Protein interactions for RNA: ENST00000248089.7

HCFC1R1-201, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene HCFC1R1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-201ENST00000248089 LETM1O95202 739 aaPredicted RBP22.12■■□□□ 1.13
HCFC1R1-201ENST00000248089 GNA15P30679 374 aa22.12■■□□□ 1.13
HCFC1R1-201ENST00000248089 C10orf76Q5T2E6 689 aa22.12■■□□□ 1.13
HCFC1R1-201ENST00000248089 TERB1Q8NA31 727 aa22.12■■□□□ 1.13
HCFC1R1-201ENST00000248089 TXNDC5Q8NBS9 432 aaKnown RBP22.12■■□□□ 1.13
HCFC1R1-201ENST00000248089 CLEC4CQ8WTT0 213 aa22.12■■□□□ 1.13
HCFC1R1-201ENST00000248089 GAB3Q8WWW8 586 aa22.12■■□□□ 1.13
HCFC1R1-201ENST00000248089 PLD4Q96BZ4 506 aa22.12■■□□□ 1.13
HCFC1R1-201ENST00000248089 FAM81BQ96LP2 452 aa22.12■■□□□ 1.13
HCFC1R1-201ENST00000248089 MIS12Q9H081 205 aa22.12■■□□□ 1.13
HCFC1R1-201ENST00000248089 MARK1Q9P0L2 795 aa22.12■■□□□ 1.13
HCFC1R1-201ENST00000248089 SFMBT1Q9UHJ3 866 aa22.12■■□□□ 1.13
HCFC1R1-201ENST00000248089 CCDC163A0A0D9SF12 145 aa22.11■■□□□ 1.13
HCFC1R1-201ENST00000248089 GTPBP10A4D1E9 387 aaKnown RBP22.11■■□□□ 1.13
HCFC1R1-201ENST00000248089 MED7O43513 233 aa22.11■■□□□ 1.13
HCFC1R1-201ENST00000248089 GABBR2O75899 941 aa22.11■■□□□ 1.13
HCFC1R1-201ENST00000248089 PON1P27169 355 aa22.11■■□□□ 1.13
HCFC1R1-201ENST00000248089 TNFRSF4P43489 277 aa22.11■■□□□ 1.13
HCFC1R1-201ENST00000248089 DGKEP52429 567 aa22.11■■□□□ 1.13
HCFC1R1-201ENST00000248089 DENND1BQ6P3S1 775 aa22.11■■□□□ 1.13
HCFC1R1-201ENST00000248089 NUDT18Q6ZVK8 323 aa22.11■■□□□ 1.13
HCFC1R1-201ENST00000248089 IL17RCQ8NAC3 791 aa22.11■■□□□ 1.13
HCFC1R1-201ENST00000248089 GOLGA1Q92805 767 aa22.11■■□□□ 1.13
HCFC1R1-201ENST00000248089 HSFY1Q96LI6 401 aa22.11■■□□□ 1.13
HCFC1R1-201ENST00000248089 ACP6Q9NPH0 428 aa22.11■■□□□ 1.13
HCFC1R1-201ENST00000248089 ABCC13Q9NSE7 274 aa22.11■■□□□ 1.13
HCFC1R1-201ENST00000248089 AGO1Q9UL18 857 aaKnown RBP22.11■■□□□ 1.13
HCFC1R1-201ENST00000248089 MSI1O43347 362 aaKnown RBP22.1■■□□□ 1.13
HCFC1R1-201ENST00000248089 KIR2DL1P43626 348 aaPredicted RBP22.1■■□□□ 1.13
HCFC1R1-201ENST00000248089 ANO7Q6IWH7 933 aa22.1■■□□□ 1.13
HCFC1R1-201ENST00000248089 SCML4Q8N228 414 aa22.1■■□□□ 1.13
HCFC1R1-201ENST00000248089 FAM160A2Q8N612 972 aaPredicted RBP22.1■■□□□ 1.13
HCFC1R1-201ENST00000248089 IRGQQ8WZA9 623 aa22.1■■□□□ 1.13
HCFC1R1-201ENST00000248089 TUBGCP2Q9BSJ2 902 aa22.1■■□□□ 1.13
HCFC1R1-201ENST00000248089 TPSD1Q9BZJ3 242 aa22.1■■□□□ 1.13
HCFC1R1-201ENST00000248089 NDST4Q9H3R1 872 aa22.1■■□□□ 1.13
HCFC1R1-201ENST00000248089 USP18Q9UMW8 372 aa22.1■■□□□ 1.13
HCFC1R1-201ENST00000248089 SDK1Q7Z5N4 2213 aa22.1■■□□□ 1.13
HCFC1R1-201ENST00000248089 A0A0A0MRY4 1105 aa22.09■■□□□ 1.13
HCFC1R1-201ENST00000248089 BECN2A8MW95 431 aa22.09■■□□□ 1.13
HCFC1R1-201ENST00000248089 KCNJ18B7U540 433 aa22.09■■□□□ 1.13
HCFC1R1-201ENST00000248089 SGK1O00141 431 aa22.09■■□□□ 1.13
HCFC1R1-201ENST00000248089 LTFP02788 710 aa22.09■■□□□ 1.13
HCFC1R1-201ENST00000248089 CHKAP35790 457 aa22.09■■□□□ 1.13
HCFC1R1-201ENST00000248089 DGKGP49619 791 aa22.09■■□□□ 1.13
HCFC1R1-201ENST00000248089 KCNJ12Q14500 433 aa22.09■■□□□ 1.13
HCFC1R1-201ENST00000248089 CRY1Q16526 586 aa22.09■■□□□ 1.13
HCFC1R1-201ENST00000248089 VWA3BQ502W6 1294 aa22.09■■□□□ 1.13
HCFC1R1-201ENST00000248089 EOGTQ5NDL2 527 aa22.09■■□□□ 1.13
HCFC1R1-201ENST00000248089 TOGARAM2Q6ZUX3 1019 aa22.09■■□□□ 1.13
HCFC1R1-201ENST00000248089 ZNF513Q8N8E2 541 aaPredicted RBP22.09■■□□□ 1.13
HCFC1R1-201ENST00000248089 SIX2Q9NPC8 291 aa22.09■■□□□ 1.13
HCFC1R1-201ENST00000248089 SAMSN1Q9NSI8 373 aaKnown RBP22.09■■□□□ 1.13
HCFC1R1-201ENST00000248089 AJAP1Q9UKB5 411 aaPredicted RBP22.09■■□□□ 1.13
HCFC1R1-201ENST00000248089 HBS1LQ9Y450 684 aaKnown RBP22.09■■□□□ 1.13
HCFC1R1-201ENST00000248089 FBXO21O94952 628 aa22.08■■□□□ 1.13
HCFC1R1-201ENST00000248089 CYBBP04839 570 aa22.08■■□□□ 1.13
HCFC1R1-201ENST00000248089 RETP07949 1114 aa22.08■■□□□ 1.13
HCFC1R1-201ENST00000248089 CHRM1P11229 460 aaPredicted RBP22.08■■□□□ 1.13
HCFC1R1-201ENST00000248089 GPD2P43304 727 aa22.08■■□□□ 1.13
HCFC1R1-201ENST00000248089 HARS2P49590 506 aaKnown RBP22.08■■□□□ 1.13
HCFC1R1-201ENST00000248089 SPEM2Q0P670 501 aa22.08■■□□□ 1.13
HCFC1R1-201ENST00000248089 HSF5Q4G112 596 aaPredicted RBP22.08■■□□□ 1.13
HCFC1R1-201ENST00000248089 MIIPQ5JXC2 388 aa22.08■■□□□ 1.13
HCFC1R1-201ENST00000248089 TMEM92Q6UXU6 159 aa22.08■■□□□ 1.13
HCFC1R1-201ENST00000248089 CACNA2D4Q7Z3S7 1137 aa22.08■■□□□ 1.13
HCFC1R1-201ENST00000248089 KBTBD6Q86V97 674 aa22.08■■□□□ 1.13
HCFC1R1-201ENST00000248089 ZNF606Q8WXB4 792 aa22.08■■□□□ 1.13
HCFC1R1-201ENST00000248089 SHC3Q92529 594 aa22.08■■□□□ 1.13
HCFC1R1-201ENST00000248089 EBF1Q9UH73 591 aa22.08■■□□□ 1.13
HCFC1R1-201ENST00000248089 DNAJC12Q9UKB3 198 aa22.08■■□□□ 1.13
HCFC1R1-201ENST00000248089 ALDH1A2O94788 518 aa22.07■■□□□ 1.12
HCFC1R1-201ENST00000248089 HNRNPLP14866 589 aaKnown RBP eCLIP22.07■■□□□ 1.12
HCFC1R1-201ENST00000248089 WASP42768 502 aa22.07■■□□□ 1.12
HCFC1R1-201ENST00000248089 TRIP4Q15650 581 aaPredicted RBP22.07■■□□□ 1.12
HCFC1R1-201ENST00000248089 MSANTD2Q6P1R3 559 aa22.07■■□□□ 1.12
HCFC1R1-201ENST00000248089 TRMT11Q7Z4G4 463 aaKnown RBP22.07■■□□□ 1.12
HCFC1R1-201ENST00000248089 SCUBE3Q8IX30 993 aa22.07■■□□□ 1.12
HCFC1R1-201ENST00000248089 MDGA1Q8NFP4 955 aa22.07■■□□□ 1.12
HCFC1R1-201ENST00000248089 FAM149B1Q96BN6 582 aa22.07■■□□□ 1.12
HCFC1R1-201ENST00000248089 P2RY11Q96G91 374 aa22.07■■□□□ 1.12
HCFC1R1-201ENST00000248089 POLMQ9NP87 494 aaPredicted RBP22.07■■□□□ 1.12
HCFC1R1-201ENST00000248089 PARD6AQ9NPB6 346 aa22.07■■□□□ 1.12
HCFC1R1-201ENST00000248089 BCCIPQ9P287 314 aaKnown RBP eCLIP22.07■■□□□ 1.12
HCFC1R1-201ENST00000248089 INVSQ9Y283 1065 aa22.07■■□□□ 1.12
HCFC1R1-201ENST00000248089 NFE2L3Q9Y4A8 694 aa22.07■■□□□ 1.12
HCFC1R1-201ENST00000248089 DCLK1O15075 740 aa22.06■■□□□ 1.12
HCFC1R1-201ENST00000248089 ADAM23O75077 832 aa22.06■■□□□ 1.12
HCFC1R1-201ENST00000248089 PENKP01210 267 aaPredicted RBP22.06■■□□□ 1.12
HCFC1R1-201ENST00000248089 ACADSBP45954 432 aa22.06■■□□□ 1.12
HCFC1R1-201ENST00000248089 MEA1Q16626 185 aa22.06■■□□□ 1.12
HCFC1R1-201ENST00000248089 TCP11X2Q5H9J9 407 aa22.06■■□□□ 1.12
HCFC1R1-201ENST00000248089 CT47A1Q5JQC4 288 aaPredicted RBP22.06■■□□□ 1.12
HCFC1R1-201ENST00000248089 FYB2Q5VWT5 728 aa22.06■■□□□ 1.12
HCFC1R1-201ENST00000248089 EGFLAMQ63HQ2 1017 aa22.06■■□□□ 1.12
HCFC1R1-201ENST00000248089 PASD1Q8IV76 773 aa22.06■■□□□ 1.12
HCFC1R1-201ENST00000248089 CPXM2Q8N436 756 aa22.06■■□□□ 1.12
HCFC1R1-201ENST00000248089 GPR161Q8N6U8 529 aaKnown RBP22.06■■□□□ 1.12
HCFC1R1-201ENST00000248089 DDI1Q8WTU0 396 aa22.06■■□□□ 1.12
HCFC1R1-201ENST00000248089 TAB2Q9NYJ8 693 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms