RNA–Protein interactions for RNA: ENST00000245544.8

NUP85-201, Transcript of nucleoporin 85, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP85, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-201ENST00000245544 GAD2Q05329 585 aa13.94□□□□□ -0.18
NUP85-201ENST00000245544 TERF2Q15554 542 aa13.94□□□□□ -0.18
NUP85-201ENST00000245544 BSPRYQ5W0U4 402 aa13.94□□□□□ -0.18
NUP85-201ENST00000245544 GOLGA6L1Q8N7Z2 621 aa13.94□□□□□ -0.18
NUP85-201ENST00000245544 FRMD8P1Q9BZ68 369 aaPredicted RBP13.94□□□□□ -0.18
NUP85-201ENST00000245544 FAM129AQ9BZQ8 928 aa13.94□□□□□ -0.18
NUP85-201ENST00000245544 CDC42EP4Q9H3Q1 356 aaKnown RBP13.94□□□□□ -0.18
NUP85-201ENST00000245544 FAM72CH0Y354 149 aa13.94□□□□□ -0.18
NUP85-201ENST00000245544 RIPK2O43353 540 aa13.94□□□□□ -0.18
NUP85-201ENST00000245544 TRAPPC3O43617 180 aa13.94□□□□□ -0.18
NUP85-201ENST00000245544 GALTP07902 379 aa13.94□□□□□ -0.18
NUP85-201ENST00000245544 SLMAPQ14BN4 828 aa13.94□□□□□ -0.18
NUP85-201ENST00000245544 FAM72AQ5TYM5 149 aa13.94□□□□□ -0.18
NUP85-201ENST00000245544 FAM72DQ6L9T8 149 aa13.94□□□□□ -0.18
NUP85-201ENST00000245544 DARS2Q6PI48 645 aaKnown RBP13.94□□□□□ -0.18
NUP85-201ENST00000245544 RSPO2Q6UXX9 243 aaPredicted RBP13.94□□□□□ -0.18
NUP85-201ENST00000245544 C4orf50Q6ZRC1 276 aa13.94□□□□□ -0.18
NUP85-201ENST00000245544 TMCO2Q7Z6W1 182 aaPredicted RBP13.94□□□□□ -0.18
NUP85-201ENST00000245544 FAM72BQ86X60 149 aa13.94□□□□□ -0.18
NUP85-201ENST00000245544 TTC9BQ8N6N2 239 aa13.94□□□□□ -0.18
NUP85-201ENST00000245544 RSAD2Q8WXG1 361 aa13.94□□□□□ -0.18
NUP85-201ENST00000245544 TOX2Q96NM4 488 aa13.94□□□□□ -0.18
NUP85-201ENST00000245544 USP29Q9HBJ7 922 aa13.94□□□□□ -0.18
NUP85-201ENST00000245544 DDIT4Q9NX09 232 aa13.94□□□□□ -0.18
NUP85-201ENST00000245544 TBX21Q9UL17 535 aa13.94□□□□□ -0.18
NUP85-201ENST00000245544 PATJQ8NI35 1801 aa13.94□□□□□ -0.18
NUP85-201ENST00000245544 GOLGA6CA6NDK9 693 aa13.93□□□□□ -0.18
NUP85-201ENST00000245544 GOLGA8KD6RF30 607 aa13.93□□□□□ -0.18
NUP85-201ENST00000245544 H7C0C1 242 aa13.93□□□□□ -0.18
NUP85-201ENST00000245544 GOLGA6DP0CG33 693 aa13.93□□□□□ -0.18
NUP85-201ENST00000245544 TGM2P21980 687 aa13.93□□□□□ -0.18
NUP85-201ENST00000245544 ATP5OP48047 213 aa13.93□□□□□ -0.18
NUP85-201ENST00000245544 ROR1Q01973 937 aa13.93□□□□□ -0.18
NUP85-201ENST00000245544 MRPL58Q14197 206 aaKnown RBP13.93□□□□□ -0.18
NUP85-201ENST00000245544 DDR2Q16832 855 aa13.93□□□□□ -0.18
NUP85-201ENST00000245544 ANKRD22Q5VYY1 191 aa13.93□□□□□ -0.18
NUP85-201ENST00000245544 SCN4BQ8IWT1 228 aa13.93□□□□□ -0.18
NUP85-201ENST00000245544 ATAD1Q8NBU5 361 aa13.93□□□□□ -0.18
NUP85-201ENST00000245544 GPR152Q8TDT2 470 aa13.93□□□□□ -0.18
NUP85-201ENST00000245544 CENPHQ9H3R5 247 aa13.93□□□□□ -0.18
NUP85-201ENST00000245544 TMBIM4Q9HC24 238 aa13.93□□□□□ -0.18
NUP85-201ENST00000245544 GOLGA6AQ9NYA3 693 aa13.93□□□□□ -0.18
NUP85-201ENST00000245544 TPX2Q9ULW0 747 aaKnown RBP13.93□□□□□ -0.18
NUP85-201ENST00000245544 LAMA3Q16787 3333 aa13.93□□□□□ -0.18
NUP85-201ENST00000245544 TCRBV7S3A2A0A539 114 aa13.93□□□□□ -0.18
NUP85-201ENST00000245544 GOLGA8MH3BSY2 632 aa13.93□□□□□ -0.18
NUP85-201ENST00000245544 SYN3O14994 580 aa13.93□□□□□ -0.18
NUP85-201ENST00000245544 SOAT2O75908 522 aa13.93□□□□□ -0.18
NUP85-201ENST00000245544 ITGB8P26012 769 aa13.93□□□□□ -0.18
NUP85-201ENST00000245544 RBL1P28749 1068 aa13.93□□□□□ -0.18
NUP85-201ENST00000245544 ADRA1BP35368 520 aa13.93□□□□□ -0.18
NUP85-201ENST00000245544 ARPP19P56211 112 aa13.93□□□□□ -0.18
NUP85-201ENST00000245544 CAV1Q03135 178 aa13.93□□□□□ -0.18
NUP85-201ENST00000245544 GABPB1Q06547 395 aaPredicted RBP13.93□□□□□ -0.18
NUP85-201ENST00000245544 KYNUQ16719 465 aa13.93□□□□□ -0.18
NUP85-201ENST00000245544 CTXN3Q4LDR2 81 aa13.93□□□□□ -0.18
NUP85-201ENST00000245544 SPDYCQ5MJ68 293 aa13.93□□□□□ -0.18
NUP85-201ENST00000245544 RTP2Q5QGT7 225 aa13.93□□□□□ -0.18
NUP85-201ENST00000245544 RNASEH2BQ5TBB1 312 aaKnown RBP13.93□□□□□ -0.18
NUP85-201ENST00000245544 NCBP2-AS2Q69YL0 99 aa13.93□□□□□ -0.18
NUP85-201ENST00000245544 FUT10Q6P4F1 479 aa13.93□□□□□ -0.18
NUP85-201ENST00000245544 VSIG1Q86XK7 387 aa13.93□□□□□ -0.18
NUP85-201ENST00000245544 CCHCR1Q8TD31 782 aa13.93□□□□□ -0.18
NUP85-201ENST00000245544 SNX10Q9Y5X0 201 aa13.93□□□□□ -0.18
NUP85-201ENST00000245544 NR2E3Q9Y5X4 410 aa13.93□□□□□ -0.18
NUP85-201ENST00000245544 COL4A4P53420 1690 aaPredicted RBP13.92□□□□□ -0.18
NUP85-201ENST00000245544 CREB3O43889 395 aa13.92□□□□□ -0.18
NUP85-201ENST00000245544 ACSL3O95573 720 aa13.92□□□□□ -0.18
NUP85-201ENST00000245544 NUDT17P0C025 328 aa13.92□□□□□ -0.18
NUP85-201ENST00000245544 FGFR3P22607 806 aa13.92□□□□□ -0.18
NUP85-201ENST00000245544 CTCFP49711 727 aaPredicted RBP13.92□□□□□ -0.18
NUP85-201ENST00000245544 SKIDA1Q1XH10 827 aa13.92□□□□□ -0.18
NUP85-201ENST00000245544 DNAJC21Q5F1R6 531 aaKnown RBP13.92□□□□□ -0.18
NUP85-201ENST00000245544 HP1BP3Q5SSJ5 553 aaPredicted RBP13.92□□□□□ -0.18
NUP85-201ENST00000245544 SYCP2LQ5T4T6 812 aa13.92□□□□□ -0.18
NUP85-201ENST00000245544 DENND2CQ68D51 928 aa13.92□□□□□ -0.18
NUP85-201ENST00000245544 TAC4Q86UU9 113 aa13.92□□□□□ -0.18
NUP85-201ENST00000245544 BBOF1Q8ND07 529 aa13.92□□□□□ -0.18
NUP85-201ENST00000245544 IRGQQ8WZA9 623 aa13.92□□□□□ -0.18
NUP85-201ENST00000245544 CPT1BQ92523 772 aa13.92□□□□□ -0.18
NUP85-201ENST00000245544 COLEC11Q9BWP8 271 aa13.92□□□□□ -0.18
NUP85-201ENST00000245544 PNPLA8Q9NP80 782 aa13.92□□□□□ -0.18
NUP85-201ENST00000245544 ARHGEF4Q9NR80 690 aa13.92□□□□□ -0.18
NUP85-201ENST00000245544 TMEM39AQ9NV64 488 aa13.92□□□□□ -0.18
NUP85-201ENST00000245544 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.92□□□□□ -0.18
NUP85-201ENST00000245544 NUDT5Q9UKK9 219 aa13.92□□□□□ -0.18
NUP85-201ENST00000245544 FARP1Q9Y4F1 1045 aaPredicted RBP13.92□□□□□ -0.18
NUP85-201ENST00000245544 ZNF487B1APH4 448 aa13.91□□□□□ -0.18
NUP85-201ENST00000245544 USP46P62068 366 aa13.91□□□□□ -0.18
NUP85-201ENST00000245544 IFFO1Q0D2I5 559 aa13.91□□□□□ -0.18
NUP85-201ENST00000245544 MTM1Q13496 603 aa13.91□□□□□ -0.18
NUP85-201ENST00000245544 SCD5Q86SK9 330 aa13.91□□□□□ -0.18
NUP85-201ENST00000245544 TP53INP2Q8IXH6 220 aa13.91□□□□□ -0.18
NUP85-201ENST00000245544 DCP1BQ8IZD4 617 aaKnown RBP13.91□□□□□ -0.18
NUP85-201ENST00000245544 ZCCHC9Q8N567 271 aaKnown RBP13.91□□□□□ -0.18
NUP85-201ENST00000245544 RNF139Q8WU17 664 aa13.91□□□□□ -0.18
NUP85-201ENST00000245544 PRCCQ92733 491 aaPredicted RBP13.91□□□□□ -0.18
NUP85-201ENST00000245544 PGAP3Q96FM1 320 aaPredicted RBP13.91□□□□□ -0.18
NUP85-201ENST00000245544 PAWRQ96IZ0 340 aaKnown RBP13.91□□□□□ -0.18
NUP85-201ENST00000245544 C9orf72Q96LT7 481 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms