RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 OTUB2Q96DC9 234 aa11.81□□□□□ -0.52
SF3B6-201ENST00000233468 SLC22A12Q96S37 553 aa11.81□□□□□ -0.52
SF3B6-201ENST00000233468 NELL2Q99435 816 aa11.81□□□□□ -0.52
SF3B6-201ENST00000233468 DCLK3Q9C098 648 aa11.81□□□□□ -0.52
SF3B6-201ENST00000233468 RNF38Q9H0F5 515 aa11.81□□□□□ -0.52
SF3B6-201ENST00000233468 NMUR1Q9HB89 426 aa11.81□□□□□ -0.52
SF3B6-201ENST00000233468 ACP6Q9NPH0 428 aa11.81□□□□□ -0.52
SF3B6-201ENST00000233468 TMEM51Q9NW97 253 aa11.81□□□□□ -0.52
SF3B6-201ENST00000233468 DUS2Q9NX74 493 aaKnown RBP11.81□□□□□ -0.52
SF3B6-201ENST00000233468 IFNKQ9P0W0 207 aa11.81□□□□□ -0.52
SF3B6-201ENST00000233468 CCL26Q9Y258 94 aa11.81□□□□□ -0.52
SF3B6-201ENST00000233468 ZNF510Q9Y2H8 683 aa11.81□□□□□ -0.52
SF3B6-201ENST00000233468 A0A1W2PQJ5 194 aa11.8□□□□□ -0.52
SF3B6-201ENST00000233468 CAPN9O14815 690 aa11.8□□□□□ -0.52
SF3B6-201ENST00000233468 EPHB6O15197 1021 aa11.8□□□□□ -0.52
SF3B6-201ENST00000233468 NCAM2O15394 837 aa11.8□□□□□ -0.52
SF3B6-201ENST00000233468 NFATC1O95644 943 aa11.8□□□□□ -0.52
SF3B6-201ENST00000233468 CALCAP01258 141 aa11.8□□□□□ -0.52
SF3B6-201ENST00000233468 LTFP02788 710 aa11.8□□□□□ -0.52
SF3B6-201ENST00000233468 CDH5P33151 784 aaPredicted RBP11.8□□□□□ -0.52
SF3B6-201ENST00000233468 STARD6P59095 220 aa11.8□□□□□ -0.52
SF3B6-201ENST00000233468 ARID5AQ03989 594 aa11.8□□□□□ -0.52
SF3B6-201ENST00000233468 TRIM14Q14142 442 aa11.8□□□□□ -0.52
SF3B6-201ENST00000233468 MLF2Q15773 248 aaPredicted RBP11.8□□□□□ -0.52
SF3B6-201ENST00000233468 ITPRIPL2Q3MIP1 535 aa11.8□□□□□ -0.52
SF3B6-201ENST00000233468 SFMBT2Q5VUG0 894 aa11.8□□□□□ -0.52
SF3B6-201ENST00000233468 TAF3Q5VWG9 929 aa11.8□□□□□ -0.52
SF3B6-201ENST00000233468 ZNF852Q6ZMS4 543 aa11.8□□□□□ -0.52
SF3B6-201ENST00000233468 SCD5Q86SK9 330 aa11.8□□□□□ -0.52
SF3B6-201ENST00000233468 ERICH1Q86X53 443 aa11.8□□□□□ -0.52
SF3B6-201ENST00000233468 PASD1Q8IV76 773 aa11.8□□□□□ -0.52
SF3B6-201ENST00000233468 SCUBE3Q8IX30 993 aa11.8□□□□□ -0.52
SF3B6-201ENST00000233468 C1orf131Q8NDD1 294 aaKnown RBP11.8□□□□□ -0.52
SF3B6-201ENST00000233468 FAM149B1Q96BN6 582 aa11.8□□□□□ -0.52
SF3B6-201ENST00000233468 RSPRY1Q96DX4 576 aa11.8□□□□□ -0.52
SF3B6-201ENST00000233468 GKN1Q9NS71 199 aa11.8□□□□□ -0.52
SF3B6-201ENST00000233468 ASNSD1Q9NWL6 643 aa11.8□□□□□ -0.52
SF3B6-201ENST00000233468 SMPD4Q9NXE4 827 aa11.8□□□□□ -0.52
SF3B6-201ENST00000233468 MARCH2Q9P0N8 246 aa11.8□□□□□ -0.52
SF3B6-201ENST00000233468 CFAP97Q9P2B7 532 aa11.8□□□□□ -0.52
SF3B6-201ENST00000233468 RASAL2Q9UJF2 1139 aa11.8□□□□□ -0.52
SF3B6-201ENST00000233468 ITIH6Q6UXX5 1313 aa11.8□□□□□ -0.52
SF3B6-201ENST00000233468 YJEFN3A6XGL0 299 aa11.79□□□□□ -0.52
SF3B6-201ENST00000233468 E5RJQ4 531 aa11.79□□□□□ -0.52
SF3B6-201ENST00000233468 E7ENQ6 273 aa11.79□□□□□ -0.52
SF3B6-201ENST00000233468 HARS2P49590 506 aaKnown RBP11.79□□□□□ -0.52
SF3B6-201ENST00000233468 FOXK2Q01167 660 aa11.79□□□□□ -0.52
SF3B6-201ENST00000233468 EFEMP1Q12805 493 aa11.79□□□□□ -0.52
SF3B6-201ENST00000233468 RUNX3Q13761 415 aa11.79□□□□□ -0.52
SF3B6-201ENST00000233468 ASIC2Q16515 512 aa11.79□□□□□ -0.52
SF3B6-201ENST00000233468 TSR1Q2NL82 804 aaKnown RBP11.79□□□□□ -0.52
SF3B6-201ENST00000233468 NOP9Q86U38 636 aaKnown RBP11.79□□□□□ -0.52
SF3B6-201ENST00000233468 VPS36Q86VN1 386 aa11.79□□□□□ -0.52
SF3B6-201ENST00000233468 RALGPS2Q86X27 583 aaPredicted RBP11.79□□□□□ -0.52
SF3B6-201ENST00000233468 MIB1Q86YT6 1006 aa11.79□□□□□ -0.52
SF3B6-201ENST00000233468 DDX1Q92499 740 aaKnown RBP11.79□□□□□ -0.52
SF3B6-201ENST00000233468 SYN2Q92777 582 aaPredicted RBP11.79□□□□□ -0.52
SF3B6-201ENST00000233468 C18orf8Q96DM3 657 aa11.79□□□□□ -0.52
SF3B6-201ENST00000233468 FAM83CQ9BQN1 747 aa11.79□□□□□ -0.52
SF3B6-201ENST00000233468 XPO4Q9C0E2 1151 aaKnown RBP11.79□□□□□ -0.52
SF3B6-201ENST00000233468 POPDC2Q9HBU9 364 aa11.79□□□□□ -0.52
SF3B6-201ENST00000233468 SEPT11Q9NVA2 429 aaKnown RBP11.79□□□□□ -0.52
SF3B6-201ENST00000233468 OSER1Q9NX31 292 aa11.79□□□□□ -0.52
SF3B6-201ENST00000233468 NOCTQ9UK39 431 aaKnown RBP11.79□□□□□ -0.52
SF3B6-201ENST00000233468 LUC7L2Q9Y383 392 aaKnown RBP11.79□□□□□ -0.52
SF3B6-201ENST00000233468 HBS1LQ9Y450 684 aaKnown RBP11.79□□□□□ -0.52
SF3B6-201ENST00000233468 BZW2Q9Y6E2 419 aaKnown RBP11.79□□□□□ -0.52
SF3B6-201ENST00000233468 TICRRQ7Z2Z1 1910 aa11.78□□□□□ -0.52
SF3B6-201ENST00000233468 MED19A0JLT2 244 aaPredicted RBP11.78□□□□□ -0.52
SF3B6-201ENST00000233468 PIK3R2O00459 728 aa11.78□□□□□ -0.52
SF3B6-201ENST00000233468 HRO43593 1189 aa11.78□□□□□ -0.52
SF3B6-201ENST00000233468 HSF2BPO75031 334 aa11.78□□□□□ -0.52
SF3B6-201ENST00000233468 TBX18O95935 607 aa11.78□□□□□ -0.52
SF3B6-201ENST00000233468 ADH1CP00326 375 aa11.78□□□□□ -0.52
SF3B6-201ENST00000233468 MMEP08473 750 aa11.78□□□□□ -0.52
SF3B6-201ENST00000233468 NCAM1P13591 858 aa11.78□□□□□ -0.52
SF3B6-201ENST00000233468 SCNN1AP37088 669 aa11.78□□□□□ -0.52
SF3B6-201ENST00000233468 NSFP46459 744 aaKnown RBP11.78□□□□□ -0.52
SF3B6-201ENST00000233468 YWHAZP63104 245 aaKnown RBP11.78□□□□□ -0.52
SF3B6-201ENST00000233468 ZBED6P86452 979 aa11.78□□□□□ -0.52
SF3B6-201ENST00000233468 MTA1Q13330 715 aa11.78□□□□□ -0.52
SF3B6-201ENST00000233468 PREPLQ4J6C6 727 aaPredicted RBP11.78□□□□□ -0.52
SF3B6-201ENST00000233468 SPECC1LQ69YQ0 1117 aa11.78□□□□□ -0.52
SF3B6-201ENST00000233468 OR6B2Q6IFH4 312 aa11.78□□□□□ -0.52
SF3B6-201ENST00000233468 HTR3DQ70Z44 454 aa11.78□□□□□ -0.52
SF3B6-201ENST00000233468 ERMP1Q7Z2K6 904 aa11.78□□□□□ -0.52
SF3B6-201ENST00000233468 UNC45BQ8IWX7 931 aa11.78□□□□□ -0.52
SF3B6-201ENST00000233468 WDTC1Q8N5D0 677 aa11.78□□□□□ -0.52
SF3B6-201ENST00000233468 CCDC26Q8TAB7 109 aa11.78□□□□□ -0.52
SF3B6-201ENST00000233468 PLD4Q96BZ4 506 aa11.78□□□□□ -0.52
SF3B6-201ENST00000233468 SERPINB11Q96P15 392 aa11.78□□□□□ -0.52
SF3B6-201ENST00000233468 LRRC3BQ96PB8 259 aa11.78□□□□□ -0.52
SF3B6-201ENST00000233468 CPXM1Q96SM3 734 aa11.78□□□□□ -0.52
SF3B6-201ENST00000233468 AGPAT1Q99943 283 aa11.78□□□□□ -0.52
SF3B6-201ENST00000233468 KLF16Q9BXK1 252 aaPredicted RBP11.78□□□□□ -0.52
SF3B6-201ENST00000233468 OSBPL6Q9BZF3 934 aa11.78□□□□□ -0.52
SF3B6-201ENST00000233468 RRN3Q9NYV6 651 aa11.78□□□□□ -0.52
SF3B6-201ENST00000233468 AIPL1Q9NZN9 384 aa11.78□□□□□ -0.52
SF3B6-201ENST00000233468 WDR35Q9P2L0 1181 aa11.78□□□□□ -0.52
SF3B6-201ENST00000233468 PIAS3Q9Y6X2 628 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms