RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 PIAS1O75925 651 aa13.43□□□□□ -0.26
MSH2-201ENST00000233146 EIF3EP60228 445 aaKnown RBP13.43□□□□□ -0.26
MSH2-201ENST00000233146 OTUD4Q01804 1114 aaKnown RBP13.43□□□□□ -0.26
MSH2-201ENST00000233146 PMS2P3Q13401 168 aa13.43□□□□□ -0.26
MSH2-201ENST00000233146 KNOP1Q1ED39 458 aaKnown RBP13.43□□□□□ -0.26
MSH2-201ENST00000233146 SLC35G1Q2M3R5 365 aa13.43□□□□□ -0.26
MSH2-201ENST00000233146 ATAD3BQ5T9A4 648 aa13.43□□□□□ -0.26
MSH2-201ENST00000233146 ZBTB46Q86UZ6 589 aa13.43□□□□□ -0.26
MSH2-201ENST00000233146 NAA50Q9GZZ1 169 aaKnown RBP13.43□□□□□ -0.26
MSH2-201ENST00000233146 RPAP3Q9H6T3 665 aaPredicted RBP13.43□□□□□ -0.26
MSH2-201ENST00000233146 RMND5AQ9H871 391 aa13.43□□□□□ -0.26
MSH2-201ENST00000233146 NANOGQ9H9S0 305 aa13.43□□□□□ -0.26
MSH2-201ENST00000233146 THG1LQ9NWX6 298 aaKnown RBP13.43□□□□□ -0.26
MSH2-201ENST00000233146 TMEM9Q9P0T7 183 aa13.43□□□□□ -0.26
MSH2-201ENST00000233146 BCAP29Q9UHQ4 241 aa13.43□□□□□ -0.26
MSH2-201ENST00000233146 ST14Q9Y5Y6 855 aa13.43□□□□□ -0.26
MSH2-201ENST00000233146 ATRNL1Q5VV63 1379 aa13.43□□□□□ -0.26
MSH2-201ENST00000233146 TRIM64A6NGJ6 449 aa13.43□□□□□ -0.26
MSH2-201ENST00000233146 FOXN3O00409 490 aaPredicted RBP13.43□□□□□ -0.26
MSH2-201ENST00000233146 SNNO75324 88 aaPredicted RBP13.43□□□□□ -0.26
MSH2-201ENST00000233146 CLPXO76031 633 aa13.43□□□□□ -0.26
MSH2-201ENST00000233146 CYP1A2P05177 515 aa13.43□□□□□ -0.26
MSH2-201ENST00000233146 M6PRP20645 277 aa13.43□□□□□ -0.26
MSH2-201ENST00000233146 IDUAP35475 653 aa13.43□□□□□ -0.26
MSH2-201ENST00000233146 NKX2-5P52952 324 aaPredicted RBP13.43□□□□□ -0.26
MSH2-201ENST00000233146 KLHL38Q2WGJ6 581 aa13.43□□□□□ -0.26
MSH2-201ENST00000233146 FRMD7Q6ZUT3 714 aa13.43□□□□□ -0.26
MSH2-201ENST00000233146 ZC3H7AQ8IWR0 971 aaKnown RBP13.43□□□□□ -0.26
MSH2-201ENST00000233146 CABLES1Q8TDN4 633 aa13.43□□□□□ -0.26
MSH2-201ENST00000233146 ZUFSPQ96AP4 578 aa13.43□□□□□ -0.26
MSH2-201ENST00000233146 CMTM5Q96DZ9 223 aa13.43□□□□□ -0.26
MSH2-201ENST00000233146 MECRQ9BV79 373 aa13.43□□□□□ -0.26
MSH2-201ENST00000233146 RAB34Q9BZG1 259 aa13.43□□□□□ -0.26
MSH2-201ENST00000233146 C20orf27Q9GZN8 174 aa13.43□□□□□ -0.26
MSH2-201ENST00000233146 TRIT1Q9H3H1 467 aaKnown RBP13.43□□□□□ -0.26
MSH2-201ENST00000233146 SIRPGQ9P1W8 387 aa13.43□□□□□ -0.26
MSH2-201ENST00000233146 IKBKGQ9Y6K9 419 aa13.43□□□□□ -0.26
MSH2-201ENST00000233146 FAM172BPA6NC97 362 aa13.42□□□□□ -0.26
MSH2-201ENST00000233146 ZNF839A8K0R7 811 aa13.42□□□□□ -0.26
MSH2-201ENST00000233146 PDXKO00764 312 aa13.42□□□□□ -0.26
MSH2-201ENST00000233146 PDE8BO95263 885 aa13.42□□□□□ -0.26
MSH2-201ENST00000233146 MLLT10P55197 1068 aa13.42□□□□□ -0.26
MSH2-201ENST00000233146 CACNB1Q02641 598 aaPredicted RBP13.42□□□□□ -0.26
MSH2-201ENST00000233146 NRF1Q16656 503 aa13.42□□□□□ -0.26
MSH2-201ENST00000233146 ARHGAP44Q17R89 818 aa13.42□□□□□ -0.26
MSH2-201ENST00000233146 ABCB5Q2M3G0 1257 aa13.42□□□□□ -0.26
MSH2-201ENST00000233146 FAM47CQ5HY64 1035 aa13.42□□□□□ -0.26
MSH2-201ENST00000233146 BTLAQ7Z6A9 289 aa13.42□□□□□ -0.26
MSH2-201ENST00000233146 TBCKQ8TEA7 893 aa13.42□□□□□ -0.26
MSH2-201ENST00000233146 NACC1Q96RE7 527 aa13.42□□□□□ -0.26
MSH2-201ENST00000233146 FAM118BQ9BPY3 351 aa13.42□□□□□ -0.26
MSH2-201ENST00000233146 SYCE1LA8MT33 242 aa13.42□□□□□ -0.26
MSH2-201ENST00000233146 FAM155AB1AL88 458 aaPredicted RBP13.42□□□□□ -0.26
MSH2-201ENST00000233146 PLOD2O00469 737 aa13.42□□□□□ -0.26
MSH2-201ENST00000233146 ATP2A1O14983 1001 aa13.42□□□□□ -0.26
MSH2-201ENST00000233146 CALUO43852 315 aaPredicted RBP13.42□□□□□ -0.26
MSH2-201ENST00000233146 SPAG6O75602 509 aa13.42□□□□□ -0.26
MSH2-201ENST00000233146 KRT6AP02538 564 aa13.42□□□□□ -0.26
MSH2-201ENST00000233146 KRT6BP04259 564 aa13.42□□□□□ -0.26
MSH2-201ENST00000233146 MCF2P10911 925 aa13.42□□□□□ -0.26
MSH2-201ENST00000233146 PTPN1P18031 435 aaKnown RBP13.42□□□□□ -0.26
MSH2-201ENST00000233146 SSTR1P30872 391 aa13.42□□□□□ -0.26
MSH2-201ENST00000233146 GNG2P59768 71 aa13.42□□□□□ -0.26
MSH2-201ENST00000233146 FAAP100Q0VG06 881 aa13.42□□□□□ -0.26
MSH2-201ENST00000233146 GRSF1Q12849 480 aaKnown RBP eCLIP13.42□□□□□ -0.26
MSH2-201ENST00000233146 DPYSQ14117 519 aa13.42□□□□□ -0.26
MSH2-201ENST00000233146 RAB39AQ14964 217 aa13.42□□□□□ -0.26
MSH2-201ENST00000233146 MORF4L2Q15014 288 aa13.42□□□□□ -0.26
MSH2-201ENST00000233146 PERM1Q5SV97 790 aa13.42□□□□□ -0.26
MSH2-201ENST00000233146 ZNF598Q86UK7 904 aaKnown RBP13.42□□□□□ -0.26
MSH2-201ENST00000233146 RALGPS2Q86X27 583 aaPredicted RBP13.42□□□□□ -0.26
MSH2-201ENST00000233146 MYO1HQ8N1T3 1032 aa13.42□□□□□ -0.26
MSH2-201ENST00000233146 PDPRQ8NCN5 879 aa13.42□□□□□ -0.26
MSH2-201ENST00000233146 ANKRD60Q9BZ19 345 aa13.42□□□□□ -0.26
MSH2-201ENST00000233146 ALS2Q96Q42 1657 aa13.42□□□□□ -0.26
MSH2-201ENST00000233146 GOLGA8QA0A0J9YX86 632 aa13.42□□□□□ -0.26
MSH2-201ENST00000233146 GOLGA8OA6NCC3 632 aa13.42□□□□□ -0.26
MSH2-201ENST00000233146 GOLGA8NF8WBI6 632 aa13.42□□□□□ -0.26
MSH2-201ENST00000233146 HAT1O14929 419 aa13.42□□□□□ -0.26
MSH2-201ENST00000233146 PPP2R2BQ00005 443 aa13.42□□□□□ -0.26
MSH2-201ENST00000233146 IKBKEQ14164 716 aa13.42□□□□□ -0.26
MSH2-201ENST00000233146 PGS1Q32NB8 556 aa13.42□□□□□ -0.26
MSH2-201ENST00000233146 CYP4A22Q5TCH4 519 aa13.42□□□□□ -0.26
MSH2-201ENST00000233146 SIX6OS1Q8N1H7 587 aa13.42□□□□□ -0.26
MSH2-201ENST00000233146 GLIS1Q8NBF1 620 aa13.42□□□□□ -0.26
MSH2-201ENST00000233146 CLSTN3Q9BQT9 956 aa13.42□□□□□ -0.26
MSH2-201ENST00000233146 ZBED2Q9BTP6 218 aa13.42□□□□□ -0.26
MSH2-201ENST00000233146 APEX2Q9UBZ4 518 aa13.42□□□□□ -0.26
MSH2-201ENST00000233146 KLQ9UEF7 1012 aa13.42□□□□□ -0.26
MSH2-201ENST00000233146 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.42□□□□□ -0.26
MSH2-201ENST00000233146 SCN11AQ9UI33 1791 aa13.42□□□□□ -0.26
MSH2-201ENST00000233146 UBAP1LF5GYI3 381 aa13.41□□□□□ -0.26
MSH2-201ENST00000233146 BANF1O75531 89 aa13.41□□□□□ -0.26
MSH2-201ENST00000233146 NR3C1P04150 777 aa13.41□□□□□ -0.26
MSH2-201ENST00000233146 NAGAP17050 411 aa13.41□□□□□ -0.26
MSH2-201ENST00000233146 RPL10P27635 214 aaKnown RBP13.41□□□□□ -0.26
MSH2-201ENST00000233146 PPP2R5DQ14738 602 aa13.41□□□□□ -0.26
MSH2-201ENST00000233146 CHI3L2Q15782 390 aa13.41□□□□□ -0.26
MSH2-201ENST00000233146 UBE2SQ16763 222 aa13.41□□□□□ -0.26
MSH2-201ENST00000233146 CIAPIN1Q6FI81 312 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms