RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 ITGB6P18564 788 aa10.85□□□□□ -0.67
TRPS1-201ENST00000220888 BEX3Q00994 111 aa10.85□□□□□ -0.67
TRPS1-201ENST00000220888 TAF13Q15543 124 aa10.85□□□□□ -0.67
TRPS1-201ENST00000220888 KLHDC7AQ5VTJ3 777 aa10.85□□□□□ -0.67
TRPS1-201ENST00000220888 CAPRIN2Q6IMN6 1127 aaKnown RBP10.85□□□□□ -0.67
TRPS1-201ENST00000220888 NLRP14Q86W24 1093 aa10.85□□□□□ -0.67
TRPS1-201ENST00000220888 CYP4Z2PQ8N1L4 340 aa10.85□□□□□ -0.67
TRPS1-201ENST00000220888 SYTL5Q8TDW5 730 aaPredicted RBP10.85□□□□□ -0.67
TRPS1-201ENST00000220888 TSC22D3Q99576 134 aa10.85□□□□□ -0.67
TRPS1-201ENST00000220888 NAT9Q9BTE0 207 aa10.85□□□□□ -0.67
TRPS1-201ENST00000220888 EHD4Q9H223 541 aa10.85□□□□□ -0.67
TRPS1-201ENST00000220888 GANQ9H2C0 597 aa10.85□□□□□ -0.67
TRPS1-201ENST00000220888 RERGLQ9H628 205 aa10.85□□□□□ -0.67
TRPS1-201ENST00000220888 ARL2BPQ9Y2Y0 163 aa10.85□□□□□ -0.67
TRPS1-201ENST00000220888 CNTNAP5Q8WYK1 1306 aa10.85□□□□□ -0.67
TRPS1-201ENST00000220888 TMEM114B3SHH9 223 aa10.85□□□□□ -0.67
TRPS1-201ENST00000220888 ACAT1P24752 427 aaKnown RBP10.85□□□□□ -0.67
TRPS1-201ENST00000220888 PPM1AP35813 382 aa10.85□□□□□ -0.67
TRPS1-201ENST00000220888 PCYT1AP49585 367 aa10.85□□□□□ -0.67
TRPS1-201ENST00000220888 ITGA8P53708 1063 aa10.85□□□□□ -0.67
TRPS1-201ENST00000220888 ALKBH2Q6NS38 261 aa10.85□□□□□ -0.67
TRPS1-201ENST00000220888 MACC1Q6ZN28 852 aa10.85□□□□□ -0.67
TRPS1-201ENST00000220888 SERPINB12Q96P63 405 aa10.85□□□□□ -0.67
TRPS1-201ENST00000220888 CNPY3Q9BT09 278 aa10.85□□□□□ -0.67
TRPS1-201ENST00000220888 CHURC1-FNTBB4DL54 471 aa10.85□□□□□ -0.67
TRPS1-201ENST00000220888 NFIBO00712 420 aa10.85□□□□□ -0.67
TRPS1-201ENST00000220888 ZBTB39O15060 712 aa10.85□□□□□ -0.67
TRPS1-201ENST00000220888 CCNT2O60583 730 aaKnown RBP10.85□□□□□ -0.67
TRPS1-201ENST00000220888 WBP4O75554 376 aaKnown RBP10.85□□□□□ -0.67
TRPS1-201ENST00000220888 SERPINA4P29622 427 aa10.85□□□□□ -0.67
TRPS1-201ENST00000220888 CTCFP49711 727 aaPredicted RBP10.85□□□□□ -0.67
TRPS1-201ENST00000220888 RAD23BP54727 409 aa10.85□□□□□ -0.67
TRPS1-201ENST00000220888 PTPN11Q06124 597 aaPredicted RBP10.85□□□□□ -0.67
TRPS1-201ENST00000220888 ACTN3Q08043 901 aaPredicted RBP10.85□□□□□ -0.67
TRPS1-201ENST00000220888 CHI3L2Q15782 390 aa10.85□□□□□ -0.67
TRPS1-201ENST00000220888 MOXD1Q6UVY6 613 aa10.85□□□□□ -0.67
TRPS1-201ENST00000220888 AGMOQ6ZNB7 445 aa10.85□□□□□ -0.67
TRPS1-201ENST00000220888 DSELQ8IZU8 1212 aa10.85□□□□□ -0.67
TRPS1-201ENST00000220888 MOSPD2Q8NHP6 518 aa10.85□□□□□ -0.67
TRPS1-201ENST00000220888 RNASE11Q8TAA1 199 aaKnown RBP10.85□□□□□ -0.67
TRPS1-201ENST00000220888 ACOX2Q99424 681 aa10.85□□□□□ -0.67
TRPS1-201ENST00000220888 RHBGQ9H310 441 aa10.85□□□□□ -0.67
TRPS1-201ENST00000220888 ZDHHC6Q9H6R6 413 aa10.85□□□□□ -0.67
TRPS1-201ENST00000220888 GPAMQ9HCL2 828 aa10.85□□□□□ -0.67
TRPS1-201ENST00000220888 SH3BP4Q9P0V3 963 aa10.85□□□□□ -0.67
TRPS1-201ENST00000220888 USP31Q70CQ4 1352 aa10.84□□□□□ -0.67
TRPS1-201ENST00000220888 MBD5Q9P267 1494 aa10.84□□□□□ -0.67
TRPS1-201ENST00000220888 A0A087X0T9 212 aa10.84□□□□□ -0.67
TRPS1-201ENST00000220888 TRIM49D1C9J1S8 452 aa10.84□□□□□ -0.67
TRPS1-201ENST00000220888 MAP3K6O95382 1288 aa10.84□□□□□ -0.67
TRPS1-201ENST00000220888 RRM1P23921 792 aa10.84□□□□□ -0.67
TRPS1-201ENST00000220888 TUBP50607 506 aa10.84□□□□□ -0.67
TRPS1-201ENST00000220888 EXOSC10Q01780 885 aaKnown RBP10.84□□□□□ -0.67
TRPS1-201ENST00000220888 USP45Q70EL2 814 aa10.84□□□□□ -0.67
TRPS1-201ENST00000220888 PANX3Q96QZ0 392 aa10.84□□□□□ -0.67
TRPS1-201ENST00000220888 APOL2Q9BQE5 337 aa10.84□□□□□ -0.67
TRPS1-201ENST00000220888 SNX12Q9UMY4 172 aa10.84□□□□□ -0.67
TRPS1-201ENST00000220888 N6AMT1Q9Y5N5 214 aa10.84□□□□□ -0.67
TRPS1-201ENST00000220888 SPATA31E1Q6ZUB1 1445 aa10.84□□□□□ -0.67
TRPS1-201ENST00000220888 ARHGEF40Q8TER5 1519 aa10.84□□□□□ -0.67
TRPS1-201ENST00000220888 ALBP02768 609 aa10.84□□□□□ -0.67
TRPS1-201ENST00000220888 MYBL2P10244 700 aa10.84□□□□□ -0.67
TRPS1-201ENST00000220888 UMPSP11172 480 aa10.84□□□□□ -0.67
TRPS1-201ENST00000220888 BIKQ13323 160 aa10.84□□□□□ -0.67
TRPS1-201ENST00000220888 CYP20A1Q6UW02 462 aa10.84□□□□□ -0.67
TRPS1-201ENST00000220888 C16orf59Q7L2K0 433 aa10.84□□□□□ -0.67
TRPS1-201ENST00000220888 PTAR1Q7Z6K3 402 aaPredicted RBP10.84□□□□□ -0.67
TRPS1-201ENST00000220888 GAS2L3Q86XJ1 694 aa10.84□□□□□ -0.67
TRPS1-201ENST00000220888 THAP11Q96EK4 314 aa10.84□□□□□ -0.67
TRPS1-201ENST00000220888 PRMT1Q99873 361 aaKnown RBP10.84□□□□□ -0.67
TRPS1-201ENST00000220888 CNPPD1Q9BV87 410 aa10.84□□□□□ -0.67
TRPS1-201ENST00000220888 TMEM51Q9NW97 253 aa10.84□□□□□ -0.67
TRPS1-201ENST00000220888 STMN3Q9NZ72 180 aa10.84□□□□□ -0.67
TRPS1-201ENST00000220888 CFAP73A6NFT4 308 aa10.84□□□□□ -0.67
TRPS1-201ENST00000220888 GLRA3O75311 464 aa10.84□□□□□ -0.67
TRPS1-201ENST00000220888 SREBF1P36956 1147 aa10.84□□□□□ -0.67
TRPS1-201ENST00000220888 ALDH5A1P51649 535 aaPredicted RBP10.84□□□□□ -0.67
TRPS1-201ENST00000220888 OAZ1P54368 228 aa10.84□□□□□ -0.67
TRPS1-201ENST00000220888 ALG11Q2TAA5 492 aa10.84□□□□□ -0.67
TRPS1-201ENST00000220888 ATP6AP1LQ52LC2 224 aa10.84□□□□□ -0.67
TRPS1-201ENST00000220888 ARMC12Q5T9G4 340 aa10.84□□□□□ -0.67
TRPS1-201ENST00000220888 RPAINQ86UA6 219 aa10.84□□□□□ -0.67
TRPS1-201ENST00000220888 JAMLQ86YT9 394 aa10.84□□□□□ -0.67
TRPS1-201ENST00000220888 C4orf19Q8IY42 314 aa10.84□□□□□ -0.67
TRPS1-201ENST00000220888 S100A13Q99584 98 aa10.84□□□□□ -0.67
TRPS1-201ENST00000220888 SH3GL1Q99961 368 aa10.84□□□□□ -0.67
TRPS1-201ENST00000220888 SHCBP1LQ9BZQ2 653 aa10.84□□□□□ -0.67
TRPS1-201ENST00000220888 AGO4Q9HCK5 861 aaKnown RBP10.84□□□□□ -0.67
TRPS1-201ENST00000220888 ENTPD4Q9Y227 616 aa10.84□□□□□ -0.67
TRPS1-201ENST00000220888 MTO1Q9Y2Z2 717 aaKnown RBP10.84□□□□□ -0.67
TRPS1-201ENST00000220888 M0R3G1 203 aa10.84□□□□□ -0.67
TRPS1-201ENST00000220888 TLX1P31314 330 aaPredicted RBP10.84□□□□□ -0.67
TRPS1-201ENST00000220888 ERFP50548 548 aa10.84□□□□□ -0.67
TRPS1-201ENST00000220888 TCEA2Q15560 299 aa10.84□□□□□ -0.67
TRPS1-201ENST00000220888 METTL16Q86W50 562 aaKnown RBP10.84□□□□□ -0.67
TRPS1-201ENST00000220888 CCDC33Q8N5R6 958 aa10.84□□□□□ -0.67
TRPS1-201ENST00000220888 DPF2Q92785 391 aa10.84□□□□□ -0.67
TRPS1-201ENST00000220888 FTHL17Q9BXU8 183 aa10.84□□□□□ -0.67
TRPS1-201ENST00000220888 EPB41L4AQ9HCS5 686 aaPredicted RBP10.84□□□□□ -0.67
TRPS1-201ENST00000220888 STK39Q9UEW8 545 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms