RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 LRP8Q14114 963 aa15.13■□□□□ 0.01
PTPRA-201ENST00000216877 ADGRE1Q14246 886 aa15.13■□□□□ 0.01
PTPRA-201ENST00000216877 MORF4L2Q15014 288 aa15.13■□□□□ 0.01
PTPRA-201ENST00000216877 LGSNQ5TDP6 509 aa15.13■□□□□ 0.01
PTPRA-201ENST00000216877 POTEAQ6S8J7 498 aa15.13■□□□□ 0.01
PTPRA-201ENST00000216877 SH2D3AQ9BRG2 576 aa15.13■□□□□ 0.01
PTPRA-201ENST00000216877 PLA2G12BQ9BX93 195 aa15.13■□□□□ 0.01
PTPRA-201ENST00000216877 STX16-NPEPL1H3BU86 382 aa15.12■□□□□ 0.01
PTPRA-201ENST00000216877 CYP11B1P15538 503 aa15.12■□□□□ 0.01
PTPRA-201ENST00000216877 CD247P20963 164 aa15.12■□□□□ 0.01
PTPRA-201ENST00000216877 FMO1Q01740 532 aa15.12■□□□□ 0.01
PTPRA-201ENST00000216877 ITPK1Q13572 414 aa15.12■□□□□ 0.01
PTPRA-201ENST00000216877 TBCCQ15814 346 aa15.12■□□□□ 0.01
PTPRA-201ENST00000216877 MFSD7Q6UXD7 560 aa15.12■□□□□ 0.01
PTPRA-201ENST00000216877 CYGBQ8WWM9 190 aa15.12■□□□□ 0.01
PTPRA-201ENST00000216877 SLCO2A1Q92959 643 aa15.12■□□□□ 0.01
PTPRA-201ENST00000216877 ZC3H12CQ9C0D7 883 aaKnown RBP15.12■□□□□ 0.01
PTPRA-201ENST00000216877 ACSS3Q9H6R3 686 aa15.12■□□□□ 0.01
PTPRA-201ENST00000216877 ACSS2Q9NR19 701 aa15.12■□□□□ 0.01
PTPRA-201ENST00000216877 PLK2Q9NYY3 685 aa15.12■□□□□ 0.01
PTPRA-201ENST00000216877 DGKBQ9Y6T7 804 aa15.12■□□□□ 0.01
PTPRA-201ENST00000216877 KBTBD13C9JR72 458 aa15.12■□□□□ 0.01
PTPRA-201ENST00000216877 AVILO75366 819 aa15.12■□□□□ 0.01
PTPRA-201ENST00000216877 MAGP20916 626 aa15.12■□□□□ 0.01
PTPRA-201ENST00000216877 EPHA3P29320 983 aa15.12■□□□□ 0.01
PTPRA-201ENST00000216877 SF3B3Q15393 1217 aaKnown RBP15.12■□□□□ 0.01
PTPRA-201ENST00000216877 AARS2Q5JTZ9 985 aaKnown RBP15.12■□□□□ 0.01
PTPRA-201ENST00000216877 CYP2R1Q6VVX0 501 aa15.12■□□□□ 0.01
PTPRA-201ENST00000216877 STXBP4Q6ZWJ1 553 aa15.12■□□□□ 0.01
PTPRA-201ENST00000216877 ZNF276Q8N554 614 aa15.12■□□□□ 0.01
PTPRA-201ENST00000216877 PI4K2AQ9BTU6 479 aa15.12■□□□□ 0.01
PTPRA-201ENST00000216877 C20orf27Q9GZN8 174 aa15.12■□□□□ 0.01
PTPRA-201ENST00000216877 NAA50Q9GZZ1 169 aaKnown RBP15.12■□□□□ 0.01
PTPRA-201ENST00000216877 HACD3Q9P035 362 aa15.12■□□□□ 0.01
PTPRA-201ENST00000216877 SF3B1O75533 1304 aaKnown RBP eCLIP15.12■□□□□ 0.012e-6■■■■■ 128.4
PTPRA-201ENST00000216877 SAC3D1A6NKF1 404 aa15.12■□□□□ 0.01
PTPRA-201ENST00000216877 TLR3O15455 904 aaKnown RBP15.12■□□□□ 0.01
PTPRA-201ENST00000216877 AQP9O43315 295 aa15.12■□□□□ 0.01
PTPRA-201ENST00000216877 AP1G1O43747 822 aa15.12■□□□□ 0.01
PTPRA-201ENST00000216877 VAMP7P51809 220 aa15.12■□□□□ 0.01
PTPRA-201ENST00000216877 MFAP3P55082 362 aa15.12■□□□□ 0.01
PTPRA-201ENST00000216877 PPP3CAQ08209 521 aa15.12■□□□□ 0.01
PTPRA-201ENST00000216877 WASHC5Q12768 1159 aa15.12■□□□□ 0.01
PTPRA-201ENST00000216877 BFSP2Q13515 415 aa15.12■□□□□ 0.01
PTPRA-201ENST00000216877 HSF5Q4G112 596 aaPredicted RBP15.12■□□□□ 0.01
PTPRA-201ENST00000216877 DCUN1D2Q6PH85 259 aa15.12■□□□□ 0.01
PTPRA-201ENST00000216877 PKD2L1Q9P0L9 805 aa15.12■□□□□ 0.01
PTPRA-201ENST00000216877 H3BNX3 289 aa15.11■□□□□ 0.01
PTPRA-201ENST00000216877 TNPO2O14787 897 aaKnown RBP15.11■□□□□ 0.01
PTPRA-201ENST00000216877 BCL10O95999 233 aa15.11■□□□□ 0.01
PTPRA-201ENST00000216877 PPM1LQ5SGD2 360 aa15.11■□□□□ 0.01
PTPRA-201ENST00000216877 FAXCQ5TGI0 409 aa15.11■□□□□ 0.01
PTPRA-201ENST00000216877 EXOC8Q8IYI6 725 aa15.11■□□□□ 0.01
PTPRA-201ENST00000216877 CEP95Q96GE4 821 aa15.11■□□□□ 0.01
PTPRA-201ENST00000216877 BIRC8Q96P09 236 aa15.11■□□□□ 0.01
PTPRA-201ENST00000216877 SNX25Q9H3E2 840 aa15.11■□□□□ 0.01
PTPRA-201ENST00000216877 AGPAT3Q9NRZ7 376 aa15.11■□□□□ 0.01
PTPRA-201ENST00000216877 N6AMT1Q9Y5N5 214 aa15.11■□□□□ 0.01
PTPRA-201ENST00000216877 DOCK2Q92608 1830 aa15.11■□□□□ 0.01
PTPRA-201ENST00000216877 RNF103-CHMP3A0A140T963 221 aa15.11■□□□□ 0.01
PTPRA-201ENST00000216877 TOR1BO14657 336 aa15.11■□□□□ 0.01
PTPRA-201ENST00000216877 GABBR2O75899 941 aa15.11■□□□□ 0.01
PTPRA-201ENST00000216877 BAIAP3O94812 1187 aa15.11■□□□□ 0.01
PTPRA-201ENST00000216877 SOX11P35716 441 aa15.11■□□□□ 0.01
PTPRA-201ENST00000216877 SNAP25P60880 206 aa15.11■□□□□ 0.01
PTPRA-201ENST00000216877 CAMK2BQ13554 666 aa15.11■□□□□ 0.01
PTPRA-201ENST00000216877 CLPPQ16740 277 aaPredicted RBP15.11■□□□□ 0.01
PTPRA-201ENST00000216877 TRIM72Q6ZMU5 477 aa15.11■□□□□ 0.01
PTPRA-201ENST00000216877 SNX32Q86XE0 403 aa15.11■□□□□ 0.01
PTPRA-201ENST00000216877 CELF1Q92879 486 aaKnown RBP15.11■□□□□ 0.01
PTPRA-201ENST00000216877 MARK4Q96L34 752 aa15.11■□□□□ 0.01
PTPRA-201ENST00000216877 NRDE2Q9H7Z3 1164 aa15.11■□□□□ 0.01
PTPRA-201ENST00000216877 PARVGQ9HBI0 331 aa15.11■□□□□ 0.01
PTPRA-201ENST00000216877 SSX2IPQ9Y2D8 614 aa15.11■□□□□ 0.01
PTPRA-201ENST00000216877 CORINQ9Y5Q5 1042 aa15.11■□□□□ 0.01
PTPRA-201ENST00000216877 K7ENM7 598 aa15.1■□□□□ 0.01
PTPRA-201ENST00000216877 GUCY1B2O75343 617 aa15.1■□□□□ 0.01
PTPRA-201ENST00000216877 GZMAP12544 262 aa15.1■□□□□ 0.01
PTPRA-201ENST00000216877 ENDOUP21128 410 aaKnown RBP15.1■□□□□ 0.01
PTPRA-201ENST00000216877 NR4A2P43354 598 aa15.1■□□□□ 0.01
PTPRA-201ENST00000216877 HSPA13P48723 471 aa15.1■□□□□ 0.01
PTPRA-201ENST00000216877 THOP1P52888 689 aa15.1■□□□□ 0.01
PTPRA-201ENST00000216877 ARL13BQ3SXY8 428 aa15.1■□□□□ 0.01
PTPRA-201ENST00000216877 FASTKD1Q53R41 847 aaKnown RBP15.1■□□□□ 0.01
PTPRA-201ENST00000216877 LIN9Q5TKA1 542 aa15.1■□□□□ 0.01
PTPRA-201ENST00000216877 ZBTB49Q6ZSB9 765 aa15.1■□□□□ 0.01
PTPRA-201ENST00000216877 KBTBD6Q86V97 674 aa15.1■□□□□ 0.01
PTPRA-201ENST00000216877 DCAKDQ8WVC6 231 aa15.1■□□□□ 0.01
PTPRA-201ENST00000216877 ATP6V1E2Q96A05 226 aa15.1■□□□□ 0.01
PTPRA-201ENST00000216877 FRMD8Q9BZ67 464 aaPredicted RBP15.1■□□□□ 0.01
PTPRA-201ENST00000216877 KLC2Q9H0B6 622 aa15.1■□□□□ 0.01
PTPRA-201ENST00000216877 CLK4Q9HAZ1 481 aaKnown RBP15.1■□□□□ 0.01
PTPRA-201ENST00000216877 AP4S1Q9Y587 144 aa15.1■□□□□ 0.01
PTPRA-201ENST00000216877 BRWD3Q6RI45 1802 aa15.1■□□□□ 0.01
PTPRA-201ENST00000216877 F5H6K3 240 aa15.1■□□□□ 0.01
PTPRA-201ENST00000216877 LIASO43766 372 aa15.1■□□□□ 0.01
PTPRA-201ENST00000216877 FBXO21O94952 628 aa15.1■□□□□ 0.01
PTPRA-201ENST00000216877 CLIC3O95833 236 aa15.1■□□□□ 0.01
PTPRA-201ENST00000216877 SNRPAP09012 282 aaKnown RBP15.1■□□□□ 0.01
PTPRA-201ENST00000216877 COX4I1P13073 169 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms