RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 DEFB119Q8N690 84 aa15.75■□□□□ 0.11
UPK3A-201ENST00000216211 ERCC4Q92889 916 aaPredicted RBP15.75■□□□□ 0.11
UPK3A-201ENST00000216211 FAXDC2Q96IV6 333 aa15.75■□□□□ 0.11
UPK3A-201ENST00000216211 TMEM74BQ9NUR3 256 aa15.75■□□□□ 0.11
UPK3A-201ENST00000216211 RMND1Q9NWS8 449 aa15.75■□□□□ 0.11
UPK3A-201ENST00000216211 CLIC5Q9NZA1 410 aa15.75■□□□□ 0.11
UPK3A-201ENST00000216211 CALCOCO1Q9P1Z2 691 aa15.75■□□□□ 0.11
UPK3A-201ENST00000216211 CACNA1BQ00975 2339 aa15.75■□□□□ 0.11
UPK3A-201ENST00000216211 ASCC3Q8N3C0 2202 aaKnown RBP15.74■□□□□ 0.11
UPK3A-201ENST00000216211 GIPC1O14908 333 aa15.74■□□□□ 0.11
UPK3A-201ENST00000216211 KLKB1P03952 638 aa15.74■□□□□ 0.11
UPK3A-201ENST00000216211 ITPKAP23677 461 aa15.74■□□□□ 0.11
UPK3A-201ENST00000216211 NOVA1P51513 510 aaKnown RBP15.74■□□□□ 0.11
UPK3A-201ENST00000216211 PMS1P54277 932 aaKnown RBP15.74■□□□□ 0.11
UPK3A-201ENST00000216211 UBE2HP62256 183 aa15.74■□□□□ 0.11
UPK3A-201ENST00000216211 RAB41Q5JT25 222 aa15.74■□□□□ 0.11
UPK3A-201ENST00000216211 ZNF658Q5TYW1 1059 aaPredicted RBP15.74■□□□□ 0.11
UPK3A-201ENST00000216211 DAB2IPQ5VWQ8 1189 aa15.74■□□□□ 0.11
UPK3A-201ENST00000216211 LYSMD4Q5XG99 296 aa15.74■□□□□ 0.11
UPK3A-201ENST00000216211 ARHGAP17Q68EM7 881 aa15.74■□□□□ 0.11
UPK3A-201ENST00000216211 ANKRD40Q6AI12 368 aa15.74■□□□□ 0.11
UPK3A-201ENST00000216211 SDE2Q6IQ49 451 aa15.74■□□□□ 0.11
UPK3A-201ENST00000216211 KIAA1211LQ6NV74 962 aa15.74■□□□□ 0.11
UPK3A-201ENST00000216211 PIGZQ86VD9 579 aa15.74■□□□□ 0.11
UPK3A-201ENST00000216211 SYT12Q8IV01 421 aa15.74■□□□□ 0.11
UPK3A-201ENST00000216211 IPO4Q8TEX9 1081 aaKnown RBP15.74■□□□□ 0.11
UPK3A-201ENST00000216211 CDK5RAP1Q96SZ6 601 aaKnown RBP15.74■□□□□ 0.11
UPK3A-201ENST00000216211 TSG101Q99816 390 aa15.74■□□□□ 0.11
UPK3A-201ENST00000216211 UBXN6Q9BZV1 441 aa15.74■□□□□ 0.11
UPK3A-201ENST00000216211 CD248Q9HCU0 757 aa15.74■□□□□ 0.11
UPK3A-201ENST00000216211 CACNA2D2Q9NY47 1150 aa15.74■□□□□ 0.11
UPK3A-201ENST00000216211 EVLQ9UI08 416 aaPredicted RBP15.74■□□□□ 0.11
UPK3A-201ENST00000216211 FBXO10Q9UK96 956 aa15.74■□□□□ 0.11
UPK3A-201ENST00000216211 ANGPTL2Q9UKU9 493 aa15.74■□□□□ 0.11
UPK3A-201ENST00000216211 RAD54BQ9Y620 910 aa15.74■□□□□ 0.11
UPK3A-201ENST00000216211 TRIM49BA6NDI0 452 aa15.73■□□□□ 0.11
UPK3A-201ENST00000216211 SLC16A3O15427 465 aaKnown RBP15.73■□□□□ 0.11
UPK3A-201ENST00000216211 AP5Z1O43299 807 aa15.73■□□□□ 0.11
UPK3A-201ENST00000216211 GADD45BO75293 160 aaPredicted RBP15.73■□□□□ 0.11
UPK3A-201ENST00000216211 NDUFV2P19404 249 aa15.73■□□□□ 0.11
UPK3A-201ENST00000216211 CORO1AP31146 461 aaKnown RBP15.73■□□□□ 0.11
UPK3A-201ENST00000216211 TKTL1P51854 596 aa15.73■□□□□ 0.11
UPK3A-201ENST00000216211 YWHAGP61981 247 aaKnown RBP eCLIP15.73■□□□□ 0.11
UPK3A-201ENST00000216211 COG7P83436 770 aa15.73■□□□□ 0.11
UPK3A-201ENST00000216211 RPL6Q02878 288 aaKnown RBP15.73■□□□□ 0.11
UPK3A-201ENST00000216211 GOLGA7BQ2TAP0 167 aa15.73■□□□□ 0.11
UPK3A-201ENST00000216211 UAP1L1Q3KQV9 507 aa15.73■□□□□ 0.11
UPK3A-201ENST00000216211 COBLL1Q53SF7 1204 aa15.73■□□□□ 0.11
UPK3A-201ENST00000216211 ZC3H3Q8IXZ2 948 aaKnown RBP15.73■□□□□ 0.11
UPK3A-201ENST00000216211 ANKRD52Q8NB46 1076 aa15.73■□□□□ 0.11
UPK3A-201ENST00000216211 NDRG1Q92597 394 aaKnown RBP15.73■□□□□ 0.11
UPK3A-201ENST00000216211 GSDMAQ96QA5 445 aa15.73■□□□□ 0.11
UPK3A-201ENST00000216211 GABRG3Q99928 467 aa15.73■□□□□ 0.11
UPK3A-201ENST00000216211 NUSAP1Q9BXS6 441 aaKnown RBP15.73■□□□□ 0.11
UPK3A-201ENST00000216211 SLC6A17Q9H1V8 727 aa15.73■□□□□ 0.11
UPK3A-201ENST00000216211 AGO1Q9UL18 857 aaKnown RBP15.73■□□□□ 0.11
UPK3A-201ENST00000216211 ZNF510Q9Y2H8 683 aa15.73■□□□□ 0.11
UPK3A-201ENST00000216211 PCDH15Q96QU1 1955 aa15.73■□□□□ 0.11
UPK3A-201ENST00000216211 CKAP5Q14008 2032 aa15.72■□□□□ 0.11
UPK3A-201ENST00000216211 IGHV1OR15-9A0A0B4J2B8 117 aa15.72■□□□□ 0.11
UPK3A-201ENST00000216211 GOLGA6L4A6NEF3 574 aa15.72■□□□□ 0.11
UPK3A-201ENST00000216211 WASH3PC4AMC7 463 aa15.72■□□□□ 0.11
UPK3A-201ENST00000216211 TULP2O00295 520 aa15.72■□□□□ 0.11
UPK3A-201ENST00000216211 KRT37O76014 449 aa15.72■□□□□ 0.11
UPK3A-201ENST00000216211 PENKP01210 267 aaPredicted RBP15.72■□□□□ 0.11
UPK3A-201ENST00000216211 FKBP3Q00688 224 aaKnown RBP15.72■□□□□ 0.11
UPK3A-201ENST00000216211 LMAN2Q12907 356 aa15.72■□□□□ 0.11
UPK3A-201ENST00000216211 CUL2Q13617 745 aa15.72■□□□□ 0.11
UPK3A-201ENST00000216211 ST3GAL2Q16842 350 aa15.72■□□□□ 0.11
UPK3A-201ENST00000216211 SPDYCQ5MJ68 293 aa15.72■□□□□ 0.11
UPK3A-201ENST00000216211 SH3PXD2AQ5TCZ1 1133 aa15.72■□□□□ 0.11
UPK3A-201ENST00000216211 FYB2Q5VWT5 728 aa15.72■□□□□ 0.11
UPK3A-201ENST00000216211 SLC36A4Q6YBV0 504 aa15.72■□□□□ 0.11
UPK3A-201ENST00000216211 RSRC2Q7L4I2 434 aaKnown RBP15.72■□□□□ 0.11
UPK3A-201ENST00000216211 ARHGAP18Q8N392 663 aa15.72■□□□□ 0.11
UPK3A-201ENST00000216211 ENGASEQ8NFI3 743 aa15.72■□□□□ 0.11
UPK3A-201ENST00000216211 ULBP1Q9BZM6 244 aa15.72■□□□□ 0.11
UPK3A-201ENST00000216211 DCLK3Q9C098 648 aa15.72■□□□□ 0.11
UPK3A-201ENST00000216211 FAM124BQ9H5Z6 455 aaPredicted RBP15.72■□□□□ 0.11
UPK3A-201ENST00000216211 CD93Q9NPY3 652 aa15.72■□□□□ 0.11
UPK3A-201ENST00000216211 FSCN3Q9NQT6 498 aa15.72■□□□□ 0.11
UPK3A-201ENST00000216211 MARCH2Q9P0N8 246 aa15.72■□□□□ 0.11
UPK3A-201ENST00000216211 PILRBQ9UKJ0 227 aa15.72■□□□□ 0.11
UPK3A-201ENST00000216211 TSPAN16Q9UKR8 245 aa15.72■□□□□ 0.11
UPK3A-201ENST00000216211 CYP8B1Q9UNU6 501 aa15.72■□□□□ 0.11
UPK3A-201ENST00000216211 COQ4Q9Y3A0 265 aa15.72■□□□□ 0.11
UPK3A-201ENST00000216211 SLC12A8A0AV02 714 aa15.71■□□□□ 0.11
UPK3A-201ENST00000216211 ZBTB24O43167 697 aaPredicted RBP15.71■□□□□ 0.11
UPK3A-201ENST00000216211 SMC2O95347 1197 aa15.71■□□□□ 0.11
UPK3A-201ENST00000216211 ZBED1O96006 694 aa15.71■□□□□ 0.11
UPK3A-201ENST00000216211 CD19P15391 556 aa15.71■□□□□ 0.11
UPK3A-201ENST00000216211 ENGP17813 658 aa15.71■□□□□ 0.11
UPK3A-201ENST00000216211 CHKAP35790 457 aa15.71■□□□□ 0.11
UPK3A-201ENST00000216211 MAPK8P45983 427 aa15.71■□□□□ 0.11
UPK3A-201ENST00000216211 SLC8A3P57103 927 aa15.71■□□□□ 0.11
UPK3A-201ENST00000216211 PDE4CQ08493 712 aa15.71■□□□□ 0.11
UPK3A-201ENST00000216211 LRMPQ12912 555 aa15.71■□□□□ 0.11
UPK3A-201ENST00000216211 GEN1Q17RS7 908 aa15.71■□□□□ 0.11
UPK3A-201ENST00000216211 SGO2Q562F6 1265 aa15.71■□□□□ 0.11
UPK3A-201ENST00000216211 PEAR1Q5VY43 1037 aaPredicted RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms