RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 ERVK-10P10266 1014 aa13.99□□□□□ -0.17
TGFBR3-201ENST00000212355 FLT3P36888 993 aa13.99□□□□□ -0.17
TGFBR3-201ENST00000212355 SUGP1Q8IWZ8 645 aaKnown RBP13.99□□□□□ -0.17
TGFBR3-201ENST00000212355 GDPD5Q8WTR4 605 aa13.99□□□□□ -0.17
TGFBR3-201ENST00000212355 CENPTQ96BT3 561 aa13.99□□□□□ -0.17
TGFBR3-201ENST00000212355 ZFYVE28Q9HCC9 887 aa13.99□□□□□ -0.17
TGFBR3-201ENST00000212355 CHST7Q9NS84 486 aa13.99□□□□□ -0.17
TGFBR3-201ENST00000212355 L1RE1Q9UN81 338 aa13.99□□□□□ -0.17
TGFBR3-201ENST00000212355 PIK3CDO00329 1044 aa13.99□□□□□ -0.17
TGFBR3-201ENST00000212355 OGTO15294 1046 aa13.99□□□□□ -0.17
TGFBR3-201ENST00000212355 VPS26AO75436 327 aa13.99□□□□□ -0.17
TGFBR3-201ENST00000212355 RARAP10276 462 aa13.99□□□□□ -0.17
TGFBR3-201ENST00000212355 FDFT1P37268 417 aa13.99□□□□□ -0.17
TGFBR3-201ENST00000212355 ITIH4Q14624 930 aa13.99□□□□□ -0.17
TGFBR3-201ENST00000212355 SV2AQ7L0J3 742 aa13.99□□□□□ -0.17
TGFBR3-201ENST00000212355 NECAB2Q7Z6G3 386 aa13.99□□□□□ -0.17
TGFBR3-201ENST00000212355 ACTL9Q8TC94 416 aa13.99□□□□□ -0.17
TGFBR3-201ENST00000212355 GFM2Q969S9 779 aaKnown RBP13.99□□□□□ -0.17
TGFBR3-201ENST00000212355 PPP1R10Q96QC0 940 aaKnown RBP13.99□□□□□ -0.17
TGFBR3-201ENST00000212355 CIPCQ9C0C6 399 aa13.99□□□□□ -0.17
TGFBR3-201ENST00000212355 NSMCE4AQ9NXX6 385 aa13.99□□□□□ -0.17
TGFBR3-201ENST00000212355 CCDC167Q9P0B6 97 aa13.99□□□□□ -0.17
TGFBR3-201ENST00000212355 TAGLN3Q9UI15 199 aa13.99□□□□□ -0.17
TGFBR3-201ENST00000212355 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.98□□□□□ -0.17
TGFBR3-201ENST00000212355 KIAA0391O15091 583 aaKnown RBP13.98□□□□□ -0.17
TGFBR3-201ENST00000212355 TP73O15350 636 aa13.98□□□□□ -0.17
TGFBR3-201ENST00000212355 VEGFAP15692 232 aaPredicted RBP13.98□□□□□ -0.17
TGFBR3-201ENST00000212355 RAG1P15918 1043 aa13.98□□□□□ -0.17
TGFBR3-201ENST00000212355 PSMB9P28065 219 aa13.98□□□□□ -0.17
TGFBR3-201ENST00000212355 CPT1AP50416 773 aa13.98□□□□□ -0.17
TGFBR3-201ENST00000212355 TBCELQ5QJ74 424 aa13.98□□□□□ -0.17
TGFBR3-201ENST00000212355 KRT84Q9NSB2 600 aa13.98□□□□□ -0.17
TGFBR3-201ENST00000212355 ANKEF1Q9NU02 776 aa13.98□□□□□ -0.17
TGFBR3-201ENST00000212355 TSPAN16Q9UKR8 245 aa13.98□□□□□ -0.17
TGFBR3-201ENST00000212355 EME2A4GXA9 379 aaPredicted RBP13.98□□□□□ -0.17
TGFBR3-201ENST00000212355 ANKRD63C9JTQ0 380 aa13.98□□□□□ -0.17
TGFBR3-201ENST00000212355 TRDMT1O14717 391 aaKnown RBP13.98□□□□□ -0.17
TGFBR3-201ENST00000212355 CTXN3Q4LDR2 81 aa13.98□□□□□ -0.17
TGFBR3-201ENST00000212355 CACHD1Q5VU97 1274 aa13.98□□□□□ -0.17
TGFBR3-201ENST00000212355 PAPD7Q5XG87 772 aaKnown RBP13.98□□□□□ -0.17
TGFBR3-201ENST00000212355 DOK6Q6PKX4 331 aa13.98□□□□□ -0.17
TGFBR3-201ENST00000212355 LRRC8DQ7L1W4 858 aa13.98□□□□□ -0.17
TGFBR3-201ENST00000212355 DCLK3Q9C098 648 aa13.98□□□□□ -0.17
TGFBR3-201ENST00000212355 PTGES3LE9PB15 166 aa13.98□□□□□ -0.17
TGFBR3-201ENST00000212355 ANXA9O76027 345 aa13.98□□□□□ -0.17
TGFBR3-201ENST00000212355 FAAP100Q0VG06 881 aa13.98□□□□□ -0.17
TGFBR3-201ENST00000212355 RIBC1Q8N443 379 aaPredicted RBP13.98□□□□□ -0.17
TGFBR3-201ENST00000212355 ZNF512BQ96KM6 892 aaPredicted RBP13.98□□□□□ -0.17
TGFBR3-201ENST00000212355 TRPC4Q9UBN4 977 aa13.98□□□□□ -0.17
TGFBR3-201ENST00000212355 GAKO14976 1311 aa13.98□□□□□ -0.17
TGFBR3-201ENST00000212355 GEMP55040 296 aa13.98□□□□□ -0.17
TGFBR3-201ENST00000212355 ERVK-9P63128 1117 aa13.98□□□□□ -0.17
TGFBR3-201ENST00000212355 SNX30Q5VWJ9 437 aa13.98□□□□□ -0.17
TGFBR3-201ENST00000212355 ATG16L2Q8NAA4 619 aa13.98□□□□□ -0.17
TGFBR3-201ENST00000212355 PDGFDQ9GZP0 370 aaPredicted RBP13.98□□□□□ -0.17
TGFBR3-201ENST00000212355 EML1O00423 815 aa13.98□□□□□ -0.17
TGFBR3-201ENST00000212355 OPLAHO14841 1288 aa13.98□□□□□ -0.17
TGFBR3-201ENST00000212355 CKMP06732 381 aa13.98□□□□□ -0.17
TGFBR3-201ENST00000212355 CASP5P51878 434 aa13.98□□□□□ -0.17
TGFBR3-201ENST00000212355 DGKKQ5KSL6 1271 aa13.98□□□□□ -0.17
TGFBR3-201ENST00000212355 RDM1Q8NG50 284 aa13.98□□□□□ -0.17
TGFBR3-201ENST00000212355 CGRRF1Q99675 332 aa13.98□□□□□ -0.17
TGFBR3-201ENST00000212355 KBTBD4Q9NVX7 518 aa13.98□□□□□ -0.17
TGFBR3-201ENST00000212355 SH3BP4Q9P0V3 963 aa13.98□□□□□ -0.17
TGFBR3-201ENST00000212355 KIF1CO43896 1103 aaKnown RBP13.97□□□□□ -0.17
TGFBR3-201ENST00000212355 USP17L7P0C7H9 530 aa13.97□□□□□ -0.17
TGFBR3-201ENST00000212355 MYL4P12829 197 aa13.97□□□□□ -0.17
TGFBR3-201ENST00000212355 GRK2P25098 689 aa13.97□□□□□ -0.17
TGFBR3-201ENST00000212355 WASHC5Q12768 1159 aa13.97□□□□□ -0.17
TGFBR3-201ENST00000212355 TYW3Q6IPR3 259 aaKnown RBP13.97□□□□□ -0.17
TGFBR3-201ENST00000212355 POLNQ7Z5Q5 900 aa13.97□□□□□ -0.17
TGFBR3-201ENST00000212355 FUCA2Q9BTY2 467 aa13.97□□□□□ -0.17
TGFBR3-201ENST00000212355 EFCAB14O75071 495 aa13.97□□□□□ -0.17
TGFBR3-201ENST00000212355 GSNP06396 782 aa13.97□□□□□ -0.17
TGFBR3-201ENST00000212355 ZNF844Q08AG5 666 aa13.97□□□□□ -0.17
TGFBR3-201ENST00000212355 C15orf59Q2T9L4 293 aaPredicted RBP13.97□□□□□ -0.17
TGFBR3-201ENST00000212355 DEFB132Q7Z7B7 95 aa13.97□□□□□ -0.17
TGFBR3-201ENST00000212355 LINC00523Q86TU6 105 aa13.97□□□□□ -0.17
TGFBR3-201ENST00000212355 PACS2Q86VP3 889 aa13.97□□□□□ -0.17
TGFBR3-201ENST00000212355 C6orf62Q9GZU0 229 aaPredicted RBP13.97□□□□□ -0.17
TGFBR3-201ENST00000212355 NINJ2Q9NZG7 142 aa13.97□□□□□ -0.17
TGFBR3-201ENST00000212355 IQCA1LA6NCM1 817 aa13.97□□□□□ -0.17
TGFBR3-201ENST00000212355 INPP4BO15327 924 aa13.97□□□□□ -0.17
TGFBR3-201ENST00000212355 CCNG1P51959 295 aa13.97□□□□□ -0.17
TGFBR3-201ENST00000212355 CRYMQ14894 314 aa13.97□□□□□ -0.17
TGFBR3-201ENST00000212355 NR6A1Q15406 480 aa13.97□□□□□ -0.17
TGFBR3-201ENST00000212355 ERMARDQ5T6L9 678 aa13.97□□□□□ -0.17
TGFBR3-201ENST00000212355 ACTRT1Q8TDG2 376 aa13.97□□□□□ -0.17
TGFBR3-201ENST00000212355 MAP10Q9P2G4 905 aa13.97□□□□□ -0.17
TGFBR3-201ENST00000212355 BLOC1S6Q9UL45 172 aa13.97□□□□□ -0.17
TGFBR3-201ENST00000212355 SHOC2Q9UQ13 582 aa13.97□□□□□ -0.17
TGFBR3-201ENST00000212355 PHGDHO43175 533 aaKnown RBP13.97□□□□□ -0.17
TGFBR3-201ENST00000212355 THRAP10827 490 aa13.97□□□□□ -0.17
TGFBR3-201ENST00000212355 PECAM1P16284 738 aaPredicted RBP13.97□□□□□ -0.17
TGFBR3-201ENST00000212355 FMO4P31512 558 aa13.97□□□□□ -0.17
TGFBR3-201ENST00000212355 OXCT1P55809 520 aa13.97□□□□□ -0.17
TGFBR3-201ENST00000212355 AASDHQ4L235 1098 aaPredicted RBP13.97□□□□□ -0.17
TGFBR3-201ENST00000212355 TTMPQ5BVD1 217 aa13.97□□□□□ -0.17
TGFBR3-201ENST00000212355 SIX5Q8N196 739 aa13.97□□□□□ -0.17
TGFBR3-201ENST00000212355 TBC1D19Q8N5T2 526 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms