RNA–Protein interactions for RNA: ENST00000016946.7

RGPD5-201, Transcript of RANBP2-like and GRIP domain containing 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD5, Length 7,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD5-201ENST00000016946 B4GALT5O43286 388 aa11.42□□□□□ -0.58
RGPD5-201ENST00000016946 IL10P22301 178 aa11.42□□□□□ -0.58
RGPD5-201ENST00000016946 PBLDP30039 288 aaPredicted RBP11.42□□□□□ -0.58
RGPD5-201ENST00000016946 LRRC74AQ0VAA2 488 aa11.42□□□□□ -0.58
RGPD5-201ENST00000016946 PLCL1Q15111 1095 aa11.42□□□□□ -0.58
RGPD5-201ENST00000016946 HOMEZQ8IX15 550 aa11.42□□□□□ -0.58
RGPD5-201ENST00000016946 KAT2BQ92831 832 aa11.42□□□□□ -0.58
RGPD5-201ENST00000016946 C18orf25Q96B23 403 aaPredicted RBP11.42□□□□□ -0.58
RGPD5-201ENST00000016946 CORO1BQ9BR76 489 aa11.42□□□□□ -0.58
RGPD5-201ENST00000016946 SPG21Q9NZD8 308 aa11.42□□□□□ -0.58
RGPD5-201ENST00000016946 STX18Q9P2W9 335 aaKnown RBP11.42□□□□□ -0.58
RGPD5-201ENST00000016946 SPASTQ9UBP0 616 aa11.42□□□□□ -0.58
RGPD5-201ENST00000016946 ASGR1P07306 291 aa11.41□□□□□ -0.58
RGPD5-201ENST00000016946 POLR2EP19388 210 aaKnown RBP11.41□□□□□ -0.58
RGPD5-201ENST00000016946 GRK3P35626 688 aa11.41□□□□□ -0.58
RGPD5-201ENST00000016946 PSEN1P49768 467 aa11.41□□□□□ -0.58
RGPD5-201ENST00000016946 TPGS1Q6ZTW0 290 aa11.41□□□□□ -0.58
RGPD5-201ENST00000016946 UBA2Q9UBT2 640 aaPredicted RBP11.41□□□□□ -0.58
RGPD5-201ENST00000016946 CDYLQ9Y232 598 aa11.41□□□□□ -0.58
RGPD5-201ENST00000016946 ARL2BPQ9Y2Y0 163 aa11.41□□□□□ -0.58
RGPD5-201ENST00000016946 FAM32AQ9Y421 112 aaKnown RBP11.41□□□□□ -0.58
RGPD5-201ENST00000016946 TRAV19A0A0A6YYK7 116 aa11.41□□□□□ -0.58
RGPD5-201ENST00000016946 TMEM120BA0PK00 339 aa11.41□□□□□ -0.58
RGPD5-201ENST00000016946 HNRNPCL2B2RXH8 293 aa11.41□□□□□ -0.58
RGPD5-201ENST00000016946 IFRD1O00458 451 aaPredicted RBP11.41□□□□□ -0.58
RGPD5-201ENST00000016946 HNRNPCL1O60812 293 aaKnown RBP11.41□□□□□ -0.58
RGPD5-201ENST00000016946 TRUB2O95900 331 aaKnown RBP11.41□□□□□ -0.58
RGPD5-201ENST00000016946 ADRB2P07550 413 aa11.41□□□□□ -0.58
RGPD5-201ENST00000016946 MMP3P08254 477 aa11.41□□□□□ -0.58
RGPD5-201ENST00000016946 SNHG28P0DPA3 235 aa11.41□□□□□ -0.58
RGPD5-201ENST00000016946 PRLRP16471 622 aa11.41□□□□□ -0.58
RGPD5-201ENST00000016946 YBX3P16989 372 aaKnown RBP eCLIP11.41□□□□□ -0.58
RGPD5-201ENST00000016946 NPR3P17342 541 aa11.41□□□□□ -0.58
RGPD5-201ENST00000016946 PRMT1Q99873 361 aaKnown RBP11.41□□□□□ -0.58
RGPD5-201ENST00000016946 C2orf49Q9BVC5 232 aaPredicted RBP11.41□□□□□ -0.58
RGPD5-201ENST00000016946 TKTL2Q9H0I9 626 aa11.41□□□□□ -0.58
RGPD5-201ENST00000016946 COPS7BQ9H9Q2 264 aaPredicted RBP11.41□□□□□ -0.58
RGPD5-201ENST00000016946 STOML1Q9UBI4 398 aa11.41□□□□□ -0.58
RGPD5-201ENST00000016946 COL1A2P08123 1366 aa11.41□□□□□ -0.58
RGPD5-201ENST00000016946 ZSCAN9O15535 394 aaPredicted RBP11.41□□□□□ -0.58
RGPD5-201ENST00000016946 CA12O43570 354 aa11.41□□□□□ -0.58
RGPD5-201ENST00000016946 DNAJC8O75937 253 aaPredicted RBP11.41□□□□□ -0.58
RGPD5-201ENST00000016946 AMPD1P23109 780 aa11.41□□□□□ -0.58
RGPD5-201ENST00000016946 CHKAP35790 457 aa11.41□□□□□ -0.58
RGPD5-201ENST00000016946 FNDC3BQ53EP0 1204 aaKnown RBP11.41□□□□□ -0.58
RGPD5-201ENST00000016946 AGBL2Q5U5Z8 902 aa11.41□□□□□ -0.58
RGPD5-201ENST00000016946 NLRP9Q7RTR0 991 aa11.41□□□□□ -0.58
RGPD5-201ENST00000016946 C11orf96Q7Z7L8 435 aa11.41□□□□□ -0.58
RGPD5-201ENST00000016946 NT5DC3Q86UY8 548 aa11.41□□□□□ -0.58
RGPD5-201ENST00000016946 PCYOX1LQ8NBM8 494 aa11.41□□□□□ -0.58
RGPD5-201ENST00000016946 MRPL1Q9BYD6 325 aaKnown RBP11.41□□□□□ -0.58
RGPD5-201ENST00000016946 TRHDEQ9UKU6 1024 aa11.41□□□□□ -0.58
RGPD5-201ENST00000016946 VANGL2Q9ULK5 521 aa11.41□□□□□ -0.58
RGPD5-201ENST00000016946 RNF112Q9ULX5 631 aa11.41□□□□□ -0.58
RGPD5-201ENST00000016946 ASTN2O75129 1339 aaPredicted RBP11.41□□□□□ -0.58
RGPD5-201ENST00000016946 GLRA3O75311 464 aa11.41□□□□□ -0.58
RGPD5-201ENST00000016946 CYP2C18P33260 490 aa11.41□□□□□ -0.58
RGPD5-201ENST00000016946 ATP6V1E1P36543 226 aa11.41□□□□□ -0.58
RGPD5-201ENST00000016946 KDSRQ06136 332 aa11.41□□□□□ -0.58
RGPD5-201ENST00000016946 TUSC3Q13454 348 aa11.41□□□□□ -0.58
RGPD5-201ENST00000016946 ACAP1Q15027 740 aa11.41□□□□□ -0.58
RGPD5-201ENST00000016946 LRP10Q7Z4F1 713 aa11.41□□□□□ -0.58
RGPD5-201ENST00000016946 SH3RF1Q7Z6J0 888 aa11.41□□□□□ -0.58
RGPD5-201ENST00000016946 TRIML2Q8N7C3 387 aa11.41□□□□□ -0.58
RGPD5-201ENST00000016946 WDR41Q9HAD4 459 aa11.41□□□□□ -0.58
RGPD5-201ENST00000016946 CACUL1Q86Y37 369 aa11.41□□□□□ -0.58
RGPD5-201ENST00000016946 SH2D3CQ8N5H7 860 aa11.41□□□□□ -0.58
RGPD5-201ENST00000016946 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.41□□□□□ -0.58
RGPD5-201ENST00000016946 HTR3CQ8WXA8 447 aa11.41□□□□□ -0.58
RGPD5-201ENST00000016946 IL17RAQ96F46 866 aa11.41□□□□□ -0.58
RGPD5-201ENST00000016946 PTCH2Q9Y6C5 1203 aa11.41□□□□□ -0.58
RGPD5-201ENST00000016946 PARNO95453 639 aaKnown RBP11.41□□□□□ -0.58
RGPD5-201ENST00000016946 KRT16P08779 473 aa11.41□□□□□ -0.58
RGPD5-201ENST00000016946 LAG3P18627 525 aa11.41□□□□□ -0.58
RGPD5-201ENST00000016946 MDH1P40925 334 aaKnown RBP11.41□□□□□ -0.58
RGPD5-201ENST00000016946 RGS9BPQ6ZS82 235 aa11.41□□□□□ -0.58
RGPD5-201ENST00000016946 RD3Q7Z3Z2 195 aa11.41□□□□□ -0.58
RGPD5-201ENST00000016946 REXO1L1PQ8IX06 675 aa11.41□□□□□ -0.58
RGPD5-201ENST00000016946 ARMC2Q8NEN0 867 aa11.41□□□□□ -0.58
RGPD5-201ENST00000016946 ACTRT1Q8TDG2 376 aa11.41□□□□□ -0.58
RGPD5-201ENST00000016946 PRKD2Q9BZL6 878 aa11.41□□□□□ -0.58
RGPD5-201ENST00000016946 NOS2P35228 1153 aa11.4□□□□□ -0.58
RGPD5-201ENST00000016946 SERPINB8P50452 374 aa11.4□□□□□ -0.58
RGPD5-201ENST00000016946 KCNK10P57789 538 aa11.4□□□□□ -0.58
RGPD5-201ENST00000016946 BCL2L1Q07817 233 aa11.4□□□□□ -0.58
RGPD5-201ENST00000016946 PIGZQ86VD9 579 aa11.4□□□□□ -0.58
RGPD5-201ENST00000016946 NAF1Q96HR8 494 aaKnown RBP11.4□□□□□ -0.58
RGPD5-201ENST00000016946 ACOT9Q9Y305 439 aa11.4□□□□□ -0.58
RGPD5-201ENST00000016946 SEPT4O43236 478 aa11.4□□□□□ -0.58
RGPD5-201ENST00000016946 GJB1P08034 283 aa11.4□□□□□ -0.58
RGPD5-201ENST00000016946 CYP2A6P11509 494 aaPredicted RBP11.4□□□□□ -0.58
RGPD5-201ENST00000016946 DARSP14868 501 aaKnown RBP11.4□□□□□ -0.58
RGPD5-201ENST00000016946 TP53BP2Q13625 1128 aa11.4□□□□□ -0.58
RGPD5-201ENST00000016946 PHKG1Q16816 387 aa11.4□□□□□ -0.58
RGPD5-201ENST00000016946 LVRNQ6Q4G3 990 aa11.4□□□□□ -0.58
RGPD5-201ENST00000016946 ABHD15Q6UXT9 468 aa11.4□□□□□ -0.58
RGPD5-201ENST00000016946 PATL1Q86TB9 770 aaKnown RBP11.4□□□□□ -0.58
RGPD5-201ENST00000016946 CCDC126Q96EE4 140 aa11.4□□□□□ -0.58
RGPD5-201ENST00000016946 VAT1Q99536 393 aa11.4□□□□□ -0.58
RGPD5-201ENST00000016946 ZCCHC17Q9NP64 241 aaKnown RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms