RNA–Protein interactions for RNA: ENSMUST00000159405.2

Pcdh1-202, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 5 BASIC

Gene Pcdh1, Length 3,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-202ENSMUST00000159405 Ap4s1Q9WVL1 144 aa12.7□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Col22a1E9Q7P1 1613 aa12.7□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Siah3B2RWG3 268 aa12.7□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Gm3187M0QWW3 260 aa12.7□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Sema6aO35464 1031 aa12.7□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Il3P01586 166 aa12.7□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Cd3gP11942 182 aa12.7□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Rpl7aP12970 266 aaKnown RBP12.7□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Rpl22P67984 128 aaKnown RBP12.7□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 BmxP97504 651 aa12.7□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Cyp2e1Q05421 493 aa12.7□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Micall2Q3TN34 1009 aa12.7□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 9130409I23RikQ3TS87 320 aa12.7□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Tmem247Q497K7 211 aa12.7□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Pcbp2Q61990 362 aaKnown RBP12.7□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Znf385bQ8BXJ8 482 aaKnown RBP12.7□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Riox2Q8CD15 465 aa12.7□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Isoc1Q91V64 297 aa12.7□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Zdhhc7Q91WU6 308 aa12.7□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Ehd1Q9WVK4 534 aaKnown RBP12.7□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Fam171a2A2A699 822 aa12.69□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 JhyE9Q793 770 aa12.69□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Gnao1P18872 354 aa12.69□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Gnl1P36916 607 aa12.69□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 LxnP70202 222 aa12.69□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Etv6P97360 485 aa12.69□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Ppm1jQ149T7 507 aa12.69□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Xxylt1Q3U4G3 392 aa12.69□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 E2f7Q6S7F2 904 aa12.69□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Galnt5Q8C102 930 aa12.69□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Serpinb10Q8K1K6 397 aa12.69□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Golm1Q91XA2 393 aa12.69□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 TrirQ9D735 173 aa12.69□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Tk2Q9R088 270 aa12.69□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Gm5114W4VSN8 858 aa12.69□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Col4a1P02463 1669 aa12.69□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Ice1E9Q286 2241 aaKnown RBP12.69□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Dhtkd1A2ATU0 921 aa12.69□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Spin2fJ3QPU0 254 aa12.69□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Tmem102Q3UPR7 509 aa12.69□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Heatr9Q5QNV8 569 aa12.69□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Psen2Q61144 448 aa12.69□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 CrkQ64010 304 aa12.69□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Sh2d5Q8JZW5 429 aa12.69□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Hid1Q8R1F6 788 aa12.69□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Gtf2a1lQ8R4I4 468 aa12.69□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Sh3bp5lQ99LH9 392 aa12.69□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Psmd8Q9CX56 353 aa12.69□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Hnrnpa0Q9CX86 305 aaKnown RBP12.69□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Rhox9Q9EQM5 227 aa12.69□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Aqp5Q9WTY4 265 aa12.69□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Sf3b1Q99NB9 1304 aaKnown RBP12.69□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Ifi207E9Q3L4 978 aa12.69□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 PdgfraP26618 1089 aa12.69□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 S100a9P31725 113 aa12.69□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Nat2P50295 290 aa12.69□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Drd4P51436 387 aa12.69□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Plk2P53351 682 aa12.69□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Osbp2Q5QNQ6 908 aa12.69□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Aldh1a2Q62148 518 aa12.69□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Slain1Q68FF7 579 aa12.69□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 ItchQ8C863 864 aa12.69□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Olfr807Q8VGI9 311 aa12.69□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Pomgnt1Q91X88 660 aa12.69□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Grk2Q99MK8 689 aa12.69□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Rnf225Q9D7D1 332 aa12.69□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Cyp2s1Q9DBX6 501 aa12.69□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 NplQ9DCJ9 320 aa12.69□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Stx12Q9ER00 274 aa12.69□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Bcl9lQ67FY2 1494 aa12.69□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 IsxA1A546 240 aa12.68□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Pdzd7E9Q9W7 1021 aa12.68□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Olfr611K7N609 323 aa12.68□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Olfr612L7N462 323 aa12.68□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 GsnP13020 780 aa12.68□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Nos2P29477 1144 aa12.68□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Aqp4P55088 323 aa12.68□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Gabrb2P63137 512 aa12.68□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Grb7Q03160 535 aa12.68□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Gm4951Q3UED7 406 aa12.68□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Lipo3Q3UT41 399 aa12.68□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Rbm44Q3V089 1013 aa12.68□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Stip1Q60864 543 aaKnown RBP12.68□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Rab34Q64008 259 aa12.68□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 WaplQ65Z40 1200 aaKnown RBP12.68□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Creb3l2Q8BH52 521 aa12.68□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Mrps35Q8BJZ4 320 aaKnown RBP12.68□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Lmo3Q8BZL8 145 aa12.68□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 RtknQ8C6B2 564 aa12.68□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Vps50Q8CI71 964 aa12.68□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Asb2Q8K0L0 634 aa12.68□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Fam151aQ8QZW3 608 aa12.68□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Mtmr4Q91XS1 1190 aa12.68□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Pla2g12bQ99P27 195 aa12.68□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Aldh1b1Q9CZS1 519 aa12.68□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 MceeQ9D1I5 178 aa12.68□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Rgs3Q9DC04 966 aa12.68□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Tgm1Q9JLF6 815 aa12.68□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Homer2Q9QWW1 354 aa12.68□□□□□ -0.38
Pcdh1-202ENSMUST00000159405 Adam17Q9Z0F8 827 aa12.68□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 19.5 ms