RNA–Protein interactions for RNA: ENSMUST00000100069.8

Scn3a-202, Transcript of Sodium channel protein, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Scn3a, Length 8,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3a-202ENSMUST00000100069 DstykQ6XUX1 927 aa7.08□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Pcdh19Q80TF3 1145 aa7.08□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Samd4bQ80XS6 687 aa7.08□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Arid5bQ8BM75 1188 aaKnown RBP7.08□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Catsper4Q8BVN3 442 aa7.08□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Slc47a1Q8K0H1 567 aa7.08□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Plagl2Q925T4 496 aa7.08□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Pcbp1P60335 356 aaKnown RBP7.08□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Krt86P97861 486 aa7.08□□□□□ -1.28
Scn3a-202ENSMUST00000100069 CrtamQ149L7 389 aa7.08□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Rnpc3Q3UZ01 514 aaKnown RBP7.08□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Q6DFW0 481 aa7.08□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Zfp512bQ6PHP4 879 aa7.08□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Ints6lQ8BND4 861 aa7.08□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Hus1Q8BQY8 280 aa7.08□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Prr33Q8C494 260 aa7.08□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Zfp57Q8C6P8 421 aa7.08□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Snrnp27Q8K194 155 aa7.08□□□□□ -1.28
Scn3a-202ENSMUST00000100069 RorbQ8R1B8 470 aa7.08□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Cdc16Q8R349 620 aa7.08□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Angel1Q8VCU0 667 aa7.08□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Ern1Q9EQY0 977 aa7.08□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Hes6Q9JHE6 224 aa7.08□□□□□ -1.28
Scn3a-202ENSMUST00000100069 PnkpQ9JLV6 522 aaKnown RBP7.08□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Ruvbl2Q9WTM5 463 aaKnown RBP7.08□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Mbd2Q9Z2E1 414 aa7.08□□□□□ -1.28
Scn3a-202ENSMUST00000100069 PfasQ5SUR0 1337 aa7.08□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Gm6408J3QNG1 320 aa7.08□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Fgl2P12804 432 aa7.08□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Polr2lP62876 67 aa7.08□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Sez6lQ6P1D5 963 aa7.08□□□□□ -1.28
Scn3a-202ENSMUST00000100069 PolnQ7TQ07 864 aa7.08□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Nsun6Q7TS68 476 aa7.08□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Nlrp10Q8CCN1 673 aa7.08□□□□□ -1.28
Scn3a-202ENSMUST00000100069 OgtQ8CGY8 1046 aa7.08□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Ces4aQ8R0W5 563 aa7.08□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Trex1Q91XB0 314 aa7.08□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Vangl2Q91ZD4 521 aa7.08□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Trp53inp1Q9QXE4 239 aa7.08□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Mapk9Q9WTU6 423 aa7.08□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Gm12794L7MTS5 483 aa7.07□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Nmt2O70311 529 aa7.07□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Ifrd1P19182 449 aa7.07□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Gbx2P48031 348 aa7.07□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Myl12bQ3THE2 172 aaKnown RBP7.07□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Ubash3bQ8BGG7 638 aa7.07□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Mical2Q8BML1 960 aa7.07□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Nipal1Q8BMW7 416 aa7.07□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Dnajc9Q91WN1 259 aaKnown RBP7.07□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Ints11Q9CWS4 600 aa7.07□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Mgrn1Q9D074 532 aa7.07□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Ptpn4Q9WU22 926 aa7.07□□□□□ -1.28
Scn3a-202ENSMUST00000100069 CpdO89001 1377 aa7.07□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Hecw2Q6I6G8 1578 aa7.07□□□□□ -1.28
Scn3a-202ENSMUST00000100069 4921501E09RikA0A0R4J054 908 aa7.07□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Gm5478D3Z6R0 159 aa7.07□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Mroh4G3X8W1 983 aa7.07□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Ctnnd2O35927 1247 aa7.07□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Nek2O35942 443 aa7.07□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Tnk2O54967 1055 aa7.07□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Birc5O70201 140 aa7.07□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Stx4P70452 298 aa7.07□□□□□ -1.28
Scn3a-202ENSMUST00000100069 9930111J21Rik1Q5SVP0 844 aa7.07□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Nup62Q63850 526 aa7.07□□□□□ -1.28
Scn3a-202ENSMUST00000100069 N4bp1Q6A037 893 aa7.07□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Naif1Q6PFD7 327 aa7.07□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Pi4kbQ8BKC8 816 aa7.07□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Mettl21cQ8BLU2 248 aa7.07□□□□□ -1.28
Scn3a-202ENSMUST00000100069 EngaseQ8BX80 734 aa7.07□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Gsdmc3Q8CB12 480 aa7.07□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Mab21L3Q8CI17 429 aa7.07□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Acsm2Q8K0L3 575 aa7.07□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Emc3Q99KI3 261 aa7.07□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Scrn1Q9CZC8 414 aa7.07□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Tmem86aQ9D8N3 241 aa7.07□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Fads2Q9Z0R9 444 aaKnown RBP7.07□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Ttc37F8VPK0 1563 aa7.07□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Gm28168A0A087WNP1 180 aa7.07□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Ripor3A1L3T7 938 aa7.07□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Gm6882J3KMT3 313 aa7.07□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Mmp20P57748 482 aa7.07□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Gm10662Q3UT86 313 aa7.07□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Carmil2Q3V3V9 1296 aa7.07□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Fbxo42Q6PDJ6 717 aa7.07□□□□□ -1.28
Scn3a-202ENSMUST00000100069 SyncripQ7TMK9 623 aaKnown RBP7.07□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Sept9Q80UG5 583 aa7.07□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Ankzf1Q80UU1 748 aaKnown RBP7.07□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Ubap1Q8BH48 502 aa7.07□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Acvr1cQ8K348 493 aa7.07□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Spag16Q8K450 639 aa7.07□□□□□ -1.28
Scn3a-202ENSMUST00000100069 IlkapQ8R0F6 392 aa7.07□□□□□ -1.28
Scn3a-202ENSMUST00000100069 IrgqQ8VIM9 583 aa7.07□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Trmt11Q9CWH5 460 aa7.07□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Duoxa2Q9D311 320 aa7.07□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Znf654Q9DAU9 571 aa7.07□□□□□ -1.28
Scn3a-202ENSMUST00000100069 PaicsQ9DCL9 425 aa7.07□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Slc12a4Q9JIS8 1085 aa7.07□□□□□ -1.28
Scn3a-202ENSMUST00000100069 B3galt4Q9Z0F0 371 aa7.07□□□□□ -1.28
Scn3a-202ENSMUST00000100069 Kdm6bQ5NCY0 1641 aa7.07□□□□□ -1.28
Scn3a-202ENSMUST00000100069 CluhQ5SW19 1315 aa7.07□□□□□ -1.28
Retrieved 100 of 22,080 RNA–protein pairs in 51.6 ms