RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Odc1P00860 461 aa23.57■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Atf2P16951 487 aaKnown RBP23.57■■□□□ 1.36
Scn1b-201ENSMUST00000098548 TktP40142 623 aaKnown RBP23.57■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Slc1a2P43006 572 aa23.57■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Bpifb5Q3UQ05 490 aa23.57■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Fnip1Q68FD7 1165 aa23.57■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Znf512Q69Z99 562 aa23.57■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Xpo1Q6P5F9 1071 aaKnown RBP23.57■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Arhgap26Q6ZQ82 814 aa23.57■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Tas2r115Q7M719 310 aa23.57■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Lgi2Q8K4Z0 550 aa23.57■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Snx9Q91VH2 595 aa23.57■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Themis2Q91YX0 663 aa23.57■■□□□ 1.36
Scn1b-201ENSMUST00000098548 PawrQ925B0 333 aa23.57■■□□□ 1.36
Scn1b-201ENSMUST00000098548 PgcQ9D7R7 392 aa23.57■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Il17rbQ9JIP3 499 aa23.57■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Noa1Q9JJG9 693 aaKnown RBP23.57■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Trpc2Q9R244 1172 aa23.57■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Diaph3Q9Z207 1171 aa23.57■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Gm7995L7N2E4 160 aa23.56■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Cldn5O54942 218 aa23.56■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Gap43P06837 227 aa23.56■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Cxcl12P40224 93 aa23.56■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Surf6P70279 355 aaKnown RBP23.56■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Sox13Q04891 613 aa23.56■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Runx2Q08775 607 aa23.56■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Mapre1Q61166 268 aaKnown RBP23.56■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Gstt1Q64471 240 aa23.56■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Hip1Q8VD75 1029 aaKnown RBP23.56■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Kdelr1Q99JH8 212 aa23.56■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Ttc33Q9D6K7 262 aa23.56■■□□□ 1.36
Scn1b-201ENSMUST00000098548 TsaccQ9DA44 124 aa23.56■■□□□ 1.36
Scn1b-201ENSMUST00000098548 DonsonQ9QXP4 560 aa23.56■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Sept5Q9Z2Q6 369 aa23.56■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Znf106O88466 1888 aa23.55■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Vwa8Q8CC88 1905 aa23.55■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Apold1E9Q0X2 246 aa23.55■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Ptpn9O35239 593 aa23.55■■□□□ 1.36
Scn1b-201ENSMUST00000098548 DffaO54786 331 aa23.55■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Hes2O54792 157 aa23.55■■□□□ 1.36
Scn1b-201ENSMUST00000098548 CopeO89079 308 aa23.55■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Fcer2P20693 331 aa23.55■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Zfp42P22227 288 aa23.55■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Anxa5P48036 319 aa23.55■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Fubp3Q3TIX6 575 aaKnown RBP23.55■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Tax1bp1Q3UKC1 814 aaKnown RBP23.55■■□□□ 1.36
Scn1b-201ENSMUST00000098548 CttnQ60598 546 aaKnown RBP23.55■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Smarcd1Q61466 515 aaKnown RBP23.55■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Nlrp14Q6B966 993 aa23.55■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Gramd4Q8CB44 633 aa23.55■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Wdr98Q8VC42 657 aa23.55■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Olfr356Q8VFP5 315 aa23.55■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Grhl1Q921D9 618 aa23.55■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Alg1Q921Q3 482 aa23.55■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Pard3bQ9CSB4 1203 aa23.55■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Cuedc2Q9CXX9 284 aa23.55■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Snf8Q9CZ28 258 aa23.55■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Mmrn1B2RPV6 1210 aa23.54■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Ca3P16015 260 aa23.54■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Flt3lgP49772 232 aa23.54■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Lilrb4Q64281 335 aa23.54■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Trit1Q80UN9 467 aa23.54■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Vmn2r43Q80Z08 845 aa23.54■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Ankrd52Q8BTI7 1076 aa23.54■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Rassf9Q8K342 435 aa23.54■■□□□ 1.36
Scn1b-201ENSMUST00000098548 OafQ8QZR4 282 aa23.54■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Vmn1r213Q8R278 384 aa23.54■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Mrps2Q924T2 291 aaKnown RBP23.54■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Ddx47Q9CWX9 455 aaKnown RBP23.54■■□□□ 1.36
Scn1b-201ENSMUST00000098548 CenpsQ9D084 142 aa23.54■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Pramef12Q9D2F1 463 aa23.54■■□□□ 1.36
Scn1b-201ENSMUST00000098548 NbnQ9R207 751 aa23.54■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Gabbr1Q9WV18 960 aa23.54■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Mapk13Q9Z1B7 366 aa23.54■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Szt2A2A9C3 3431 aa23.54■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Ism1A2ATD1 454 aa23.53■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Gm5483B2RV77 97 aa23.53■■□□□ 1.36
Scn1b-201ENSMUST00000098548 DgkdE9PUQ8 1220 aa23.53■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Hsd17b2P51658 381 aa23.53■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Adcy8P97490 1249 aa23.53■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Cfhr2Q4LDF6 332 aa23.53■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Shroom1Q5SX79 823 aa23.53■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Ksr1Q61097 873 aa23.53■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Tfdp2Q64163 446 aa23.53■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Fez2Q6TYB5 348 aa23.53■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Svs3bQ8BZH8 265 aa23.53■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Ccdc159Q8C963 411 aa23.53■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Prpf39Q8K2Z2 665 aa23.53■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Tsnaxip1Q99P25 704 aa23.53■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Armc9Q9D2I5 817 aa23.53■■□□□ 1.36
Scn1b-201ENSMUST00000098548 LactbQ9EP89 551 aa23.53■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Samd15F6XZJ7 620 aa23.52■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Folh1O35409 752 aa23.52■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Ca8P28651 291 aa23.52■■□□□ 1.36
Scn1b-201ENSMUST00000098548 CtswP56203 371 aa23.52■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Wbp2P97765 261 aa23.52■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Pde1bQ01065 535 aa23.52■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Tex11Q14AT2 947 aa23.52■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Pid1Q3UBG2 217 aa23.52■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Cypt4Q6P925 153 aa23.52■■□□□ 1.36
Retrieved 100 of 22,080 RNA–protein pairs in 22.3 ms