RNA–Protein interactions for RNA: ENSMUST00000055758.15

Ubr3-201, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ubr3, Length 8,072 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-201ENSMUST00000055758 Taf8Q9EQH4 308 aa16.1■□□□□ 0.17
Ubr3-201ENSMUST00000055758 Pcdh11xF6ZNL5 1338 aa16.1■□□□□ 0.17
Ubr3-201ENSMUST00000055758 Etnk2A7MCT6 385 aa16.1■□□□□ 0.17
Ubr3-201ENSMUST00000055758 Hmox2O70252 315 aa16.1■□□□□ 0.17
Ubr3-201ENSMUST00000055758 Nfkb1P25799 971 aa16.1■□□□□ 0.17
Ubr3-201ENSMUST00000055758 Ptgs2Q05769 604 aa16.1■□□□□ 0.17
Ubr3-201ENSMUST00000055758 Vps72Q62481 368 aa16.1■□□□□ 0.17
Ubr3-201ENSMUST00000055758 Mgat4aQ812G0 535 aa16.1■□□□□ 0.17
Ubr3-201ENSMUST00000055758 Cops7bQ8BV13 264 aa16.1■□□□□ 0.17
Ubr3-201ENSMUST00000055758 Tor1aip2Q8BYU6 502 aa16.1■□□□□ 0.17
Ubr3-201ENSMUST00000055758 Elmo3Q8BYZ7 720 aa16.1■□□□□ 0.17
Ubr3-201ENSMUST00000055758 Cyp2c70Q91W64 489 aa16.1■□□□□ 0.17
Ubr3-201ENSMUST00000055758 Dnajc9Q91WN1 259 aaKnown RBP16.1■□□□□ 0.17
Ubr3-201ENSMUST00000055758 PlekQ9JHK5 350 aaKnown RBP16.1■□□□□ 0.17
Ubr3-201ENSMUST00000055758 Klhl32A2AJX0 620 aa16.1■□□□□ 0.17
Ubr3-201ENSMUST00000055758 Kpna6O35345 536 aa16.1■□□□□ 0.17
Ubr3-201ENSMUST00000055758 Cyp4a10O88833 509 aa16.1■□□□□ 0.17
Ubr3-201ENSMUST00000055758 Epha7Q61772 998 aa16.1■□□□□ 0.17
Ubr3-201ENSMUST00000055758 SyncripQ7TMK9 623 aaKnown RBP16.1■□□□□ 0.17
Ubr3-201ENSMUST00000055758 Smco3Q8BQM7 225 aa16.1■□□□□ 0.17
Ubr3-201ENSMUST00000055758 OplahQ8K010 1288 aa16.1■□□□□ 0.17
Ubr3-201ENSMUST00000055758 Klrb1fQ8VD98 217 aa16.1■□□□□ 0.17
Ubr3-201ENSMUST00000055758 Oas1eA0A0J9YV76 386 aa16.09■□□□□ 0.17
Ubr3-201ENSMUST00000055758 Atp8b4A2ANX3 1194 aa16.09■□□□□ 0.17
Ubr3-201ENSMUST00000055758 Zbed6D2EAC2 980 aa16.09■□□□□ 0.17
Ubr3-201ENSMUST00000055758 Pgbd1E9Q492 415 aa16.09■□□□□ 0.17
Ubr3-201ENSMUST00000055758 Fgfr2P21803 821 aa16.09■□□□□ 0.17
Ubr3-201ENSMUST00000055758 KdsrQ6GV12 332 aa16.09■□□□□ 0.17
Ubr3-201ENSMUST00000055758 Ppp2r1bQ7TNP2 601 aaKnown RBP16.09■□□□□ 0.17
Ubr3-201ENSMUST00000055758 Gpr141Q7TQP0 305 aa16.09■□□□□ 0.17
Ubr3-201ENSMUST00000055758 D6Wsu163eQ91YN0 552 aa16.09■□□□□ 0.17
Ubr3-201ENSMUST00000055758 Elovl6Q920L5 267 aa16.09■□□□□ 0.17
Ubr3-201ENSMUST00000055758 Exosc4Q921I9 245 aaKnown RBP16.09■□□□□ 0.17
Ubr3-201ENSMUST00000055758 Ddx50Q99MJ9 734 aaKnown RBP16.09■□□□□ 0.17
Ubr3-201ENSMUST00000055758 Atg7Q9D906 698 aa16.09■□□□□ 0.17
Ubr3-201ENSMUST00000055758 Itga7Q61738 1179 aa16.09■□□□□ 0.17
Ubr3-201ENSMUST00000055758 Hist2h2acQ64523 129 aa16.09■□□□□ 0.17
Ubr3-201ENSMUST00000055758 Hist2h2aa1Q6GSS7 130 aaKnown RBP16.09■□□□□ 0.17
Ubr3-201ENSMUST00000055758 Tmc3Q7TQ69 1130 aa16.09■□□□□ 0.17
Ubr3-201ENSMUST00000055758 Dact1Q8R4A3 778 aa16.09■□□□□ 0.17
Ubr3-201ENSMUST00000055758 Rad21l1A2AU37 552 aa16.09■□□□□ 0.17
Ubr3-201ENSMUST00000055758 Celf1P28659 486 aaKnown RBP16.09■□□□□ 0.17
Ubr3-201ENSMUST00000055758 Scrn3Q3TMH2 418 aa16.09■□□□□ 0.17
Ubr3-201ENSMUST00000055758 Pim2Q62070 370 aa16.09■□□□□ 0.17
Ubr3-201ENSMUST00000055758 Olfr805Q8VFI4 319 aa16.09■□□□□ 0.17
Ubr3-201ENSMUST00000055758 Adam17Q9Z0F8 827 aa16.09■□□□□ 0.17
Ubr3-201ENSMUST00000055758 Mcm9Q2KHI9 1134 aa16.09■□□□□ 0.17
Ubr3-201ENSMUST00000055758 Naaladl2A0A0N4SUJ3 795 aa16.09■□□□□ 0.17
Ubr3-201ENSMUST00000055758 Trmt1lA2RSY6 728 aaKnown RBP16.09■□□□□ 0.17
Ubr3-201ENSMUST00000055758 EloblA6PWE0 161 aa16.09■□□□□ 0.17
Ubr3-201ENSMUST00000055758 Ankrd27Q3UMR0 1048 aa16.09■□□□□ 0.17
Ubr3-201ENSMUST00000055758 Clca4aQ6Q473 924 aa16.09■□□□□ 0.17
Ubr3-201ENSMUST00000055758 SphkapQ6NSW3 1687 aa16.09■□□□□ 0.17
Ubr3-201ENSMUST00000055758 Osbpl7A2A716 963 aa16.09■□□□□ 0.17
Ubr3-201ENSMUST00000055758 Sult6b2B7ZWN4 290 aa16.09■□□□□ 0.17
Ubr3-201ENSMUST00000055758 Sema6aO35464 1031 aa16.09■□□□□ 0.17
Ubr3-201ENSMUST00000055758 H2-AaP01910 256 aa16.09■□□□□ 0.17
Ubr3-201ENSMUST00000055758 Hdgfl2Q3UMU9 669 aa16.09■□□□□ 0.17
Ubr3-201ENSMUST00000055758 Clec12aQ504P2 267 aa16.09■□□□□ 0.17
Ubr3-201ENSMUST00000055758 Adora2bQ60614 332 aa16.09■□□□□ 0.17
Ubr3-201ENSMUST00000055758 Atg16l2Q6KAU8 623 aa16.09■□□□□ 0.17
Ubr3-201ENSMUST00000055758 Wdr48Q8BH57 676 aa16.09■□□□□ 0.17
Ubr3-201ENSMUST00000055758 Slc9b1Q8C0X2 565 aa16.09■□□□□ 0.17
Ubr3-201ENSMUST00000055758 Khdrbs2Q9WU01 349 aa16.09■□□□□ 0.17
Ubr3-201ENSMUST00000055758 Abca5Q8K448 1642 aa16.09■□□□□ 0.17
Ubr3-201ENSMUST00000055758 Chst3O88199 472 aa16.08■□□□□ 0.17
Ubr3-201ENSMUST00000055758 Cst8P32766 142 aa16.08■□□□□ 0.17
Ubr3-201ENSMUST00000055758 Tnni3kQ5GIG6 834 aa16.08■□□□□ 0.17
Ubr3-201ENSMUST00000055758 Smim11aQ99J19 55 aa16.08■□□□□ 0.17
Ubr3-201ENSMUST00000055758 Mettl16Q9CQG2 553 aaKnown RBP16.08■□□□□ 0.17
Ubr3-201ENSMUST00000055758 Btbd18A0A0A6YY25 723 aa16.08■□□□□ 0.17
Ubr3-201ENSMUST00000055758 Hoxa2P31245 372 aa16.08■□□□□ 0.17
Ubr3-201ENSMUST00000055758 Ripk2P58801 539 aa16.08■□□□□ 0.17
Ubr3-201ENSMUST00000055758 AurkaP97477 395 aa16.08■□□□□ 0.17
Ubr3-201ENSMUST00000055758 Klra5Q60652 266 aa16.08■□□□□ 0.17
Ubr3-201ENSMUST00000055758 Ttc36Q8VBW8 186 aa16.08■□□□□ 0.17
Ubr3-201ENSMUST00000055758 St7Q99M96 577 aa16.08■□□□□ 0.17
Ubr3-201ENSMUST00000055758 Slc26a5Q99NH7 744 aa16.08■□□□□ 0.17
Ubr3-201ENSMUST00000055758 1700123K08RikQ9D991 295 aa16.08■□□□□ 0.17
Ubr3-201ENSMUST00000055758 Gm7275E9Q1B3 247 aa16.08■□□□□ 0.16
Ubr3-201ENSMUST00000055758 Atpif1O35143 106 aa16.08■□□□□ 0.16
Ubr3-201ENSMUST00000055758 Pou2f3P31362 431 aa16.08■□□□□ 0.16
Ubr3-201ENSMUST00000055758 Igfbp4P47879 254 aa16.08■□□□□ 0.16
Ubr3-201ENSMUST00000055758 Gpr1Q8K087 353 aa16.08■□□□□ 0.16
Ubr3-201ENSMUST00000055758 Kbtbd4Q8R179 534 aa16.08■□□□□ 0.16
Ubr3-201ENSMUST00000055758 Nup85Q8R480 656 aaKnown RBP16.08■□□□□ 0.16
Ubr3-201ENSMUST00000055758 Snx10Q9CWT3 201 aa16.08■□□□□ 0.16
Ubr3-201ENSMUST00000055758 Ppp2r3cQ9JK24 453 aa16.08■□□□□ 0.16
Ubr3-201ENSMUST00000055758 Gm11027G8JL69 66 aa16.08■□□□□ 0.16
Ubr3-201ENSMUST00000055758 Alox12P39655 663 aa16.08■□□□□ 0.16
Ubr3-201ENSMUST00000055758 Fam102bQ8BQS4 339 aa16.08■□□□□ 0.16
Ubr3-201ENSMUST00000055758 Tada2aQ8CHV6 443 aa16.08■□□□□ 0.16
Ubr3-201ENSMUST00000055758 Zfp61Q923D1 555 aa16.08■□□□□ 0.16
Ubr3-201ENSMUST00000055758 Wdsub1Q9D0I6 474 aa16.08■□□□□ 0.16
Ubr3-201ENSMUST00000055758 Ttll9A2APC3 461 aa16.08■□□□□ 0.16
Ubr3-201ENSMUST00000055758 Ms4a5Q810P8 197 aa16.08■□□□□ 0.16
Ubr3-201ENSMUST00000055758 Lpcat2Q8BYI6 544 aa16.08■□□□□ 0.16
Ubr3-201ENSMUST00000055758 Slc35c2Q8VCX2 364 aa16.08■□□□□ 0.16
Ubr3-201ENSMUST00000055758 Olfr615Q8VGY4 313 aa16.08■□□□□ 0.16
Ubr3-201ENSMUST00000055758 Bhmt2Q91WS4 363 aa16.08■□□□□ 0.16
Retrieved 100 of 22,080 RNA–protein pairs in 32.7 ms