RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Klhl36Q8R124 613 aa11.22□□□□□ -0.61
Msh3-201ENSMUST00000022220 Hdhd5Q91WM2 419 aa11.22□□□□□ -0.61
Msh3-201ENSMUST00000022220 ChiaQ91XA9 473 aa11.22□□□□□ -0.61
Msh3-201ENSMUST00000022220 DcpsQ9DAR7 338 aa11.22□□□□□ -0.61
Msh3-201ENSMUST00000022220 Gon4lQ9DB00 2260 aa11.22□□□□□ -0.61
Msh3-201ENSMUST00000022220 Dennd5bA2RSQ0 1274 aa11.21□□□□□ -0.61
Msh3-201ENSMUST00000022220 RxrbP28704 520 aa11.21□□□□□ -0.61
Msh3-201ENSMUST00000022220 Mmp3P28862 477 aa11.21□□□□□ -0.61
Msh3-201ENSMUST00000022220 Rpl5P47962 297 aaKnown RBP11.21□□□□□ -0.61
Msh3-201ENSMUST00000022220 Mfsd14aP70187 490 aa11.21□□□□□ -0.61
Msh3-201ENSMUST00000022220 Fbxw2Q60584 422 aa11.21□□□□□ -0.61
Msh3-201ENSMUST00000022220 Cln3Q61124 438 aa11.21□□□□□ -0.61
Msh3-201ENSMUST00000022220 Frmd5Q6P5H6 517 aa11.21□□□□□ -0.61
Msh3-201ENSMUST00000022220 Bnip1Q6QD59 228 aa11.21□□□□□ -0.61
Msh3-201ENSMUST00000022220 Rhpn2Q8BWR8 686 aa11.21□□□□□ -0.61
Msh3-201ENSMUST00000022220 Dhx32Q8BZS9 744 aa11.21□□□□□ -0.61
Msh3-201ENSMUST00000022220 Lin52Q8CD94 116 aa11.21□□□□□ -0.61
Msh3-201ENSMUST00000022220 Colgalt1Q8K297 617 aa11.21□□□□□ -0.61
Msh3-201ENSMUST00000022220 Ssx2ipQ8VC66 615 aa11.21□□□□□ -0.61
Msh3-201ENSMUST00000022220 FtcdQ91XD4 541 aa11.21□□□□□ -0.61
Msh3-201ENSMUST00000022220 Stk33Q924X7 491 aa11.21□□□□□ -0.61
Msh3-201ENSMUST00000022220 Tdrd12Q9CWU0 1215 aa11.21□□□□□ -0.61
Msh3-201ENSMUST00000022220 Adgrf4Q9D2L6 698 aa11.21□□□□□ -0.61
Msh3-201ENSMUST00000022220 PyglQ9ET01 850 aa11.21□□□□□ -0.61
Msh3-201ENSMUST00000022220 AfdnQ9QZQ1 1820 aaKnown RBP11.21□□□□□ -0.61
Msh3-201ENSMUST00000022220 Kif13bA0A286YCV9 1847 aa11.21□□□□□ -0.61
Msh3-201ENSMUST00000022220 Slc16a10Q3U9N9 512 aa11.21□□□□□ -0.61
Msh3-201ENSMUST00000022220 Hif1aQ61221 836 aaKnown RBP11.21□□□□□ -0.61
Msh3-201ENSMUST00000022220 Otud6aQ6IE21 290 aa11.21□□□□□ -0.61
Msh3-201ENSMUST00000022220 Ltbp1Q8CG19 1712 aa11.21□□□□□ -0.61
Msh3-201ENSMUST00000022220 Cox18Q8VC74 331 aa11.21□□□□□ -0.61
Msh3-201ENSMUST00000022220 Alg9Q8VDI9 611 aa11.21□□□□□ -0.61
Msh3-201ENSMUST00000022220 Olfr1502Q8VG66 316 aa11.21□□□□□ -0.61
Msh3-201ENSMUST00000022220 Tnrc6cQ3UHC0 1690 aaKnown RBP11.21□□□□□ -0.62
Msh3-201ENSMUST00000022220 Ubr2Q6WKZ8 1755 aa11.21□□□□□ -0.62
Msh3-201ENSMUST00000022220 Vwa5b1A9Z1V5 1215 aa11.21□□□□□ -0.62
Msh3-201ENSMUST00000022220 Gm4302E9PX25 294 aa11.21□□□□□ -0.62
Msh3-201ENSMUST00000022220 Ppargc1aO70343 797 aa11.21□□□□□ -0.62
Msh3-201ENSMUST00000022220 Cd72P21855 354 aa11.21□□□□□ -0.62
Msh3-201ENSMUST00000022220 Slc11a2P49282 568 aa11.21□□□□□ -0.62
Msh3-201ENSMUST00000022220 Serpina1eQ00898 413 aa11.21□□□□□ -0.62
Msh3-201ENSMUST00000022220 Abi3bpQ59IW6 1179 aa11.21□□□□□ -0.62
Msh3-201ENSMUST00000022220 OgdhQ60597 1023 aaKnown RBP11.21□□□□□ -0.62
Msh3-201ENSMUST00000022220 Smndc1Q8BGT7 238 aaKnown RBP11.21□□□□□ -0.62
Msh3-201ENSMUST00000022220 Nt5c1bQ91YE9 573 aa11.21□□□□□ -0.62
Msh3-201ENSMUST00000022220 Ggt7Q99JP7 662 aa11.21□□□□□ -0.62
Msh3-201ENSMUST00000022220 Txndc12Q9CQU0 170 aa11.21□□□□□ -0.62
Msh3-201ENSMUST00000022220 AenQ9CZI9 336 aaKnown RBP11.21□□□□□ -0.62
Msh3-201ENSMUST00000022220 Col1a1P11087 1453 aa11.21□□□□□ -0.62
Msh3-201ENSMUST00000022220 MafbP54841 323 aa11.2□□□□□ -0.62
Msh3-201ENSMUST00000022220 Tarbp2P97473 365 aa11.2□□□□□ -0.62
Msh3-201ENSMUST00000022220 Ppm1jQ149T7 507 aa11.2□□□□□ -0.62
Msh3-201ENSMUST00000022220 Hddc2Q3SXD3 199 aa11.2□□□□□ -0.62
Msh3-201ENSMUST00000022220 E330034G19RikQ3UWX6 351 aa11.2□□□□□ -0.62
Msh3-201ENSMUST00000022220 Zdhhc18Q5Y5T2 380 aa11.2□□□□□ -0.62
Msh3-201ENSMUST00000022220 Grik1Q60934 836 aa11.2□□□□□ -0.62
Msh3-201ENSMUST00000022220 Tfap2bQ61313 459 aa11.2□□□□□ -0.62
Msh3-201ENSMUST00000022220 Ankrd6Q69ZU8 712 aa11.2□□□□□ -0.62
Msh3-201ENSMUST00000022220 N4bp1Q6A037 893 aa11.2□□□□□ -0.62
Msh3-201ENSMUST00000022220 Osbpl6Q8BXR9 959 aa11.2□□□□□ -0.62
Msh3-201ENSMUST00000022220 Fbxo43Q8CDI2 640 aa11.2□□□□□ -0.62
Msh3-201ENSMUST00000022220 HpdlQ8K248 371 aa11.2□□□□□ -0.62
Msh3-201ENSMUST00000022220 Vwa1Q8R2Z5 415 aa11.2□□□□□ -0.62
Msh3-201ENSMUST00000022220 Ppp6r2Q8R3Q2 923 aa11.2□□□□□ -0.62
Msh3-201ENSMUST00000022220 Olfr385Q8VGT1 312 aa11.2□□□□□ -0.62
Msh3-201ENSMUST00000022220 Kdm4bQ91VY5 1086 aa11.2□□□□□ -0.62
Msh3-201ENSMUST00000022220 Asb7Q91ZU0 318 aa11.2□□□□□ -0.62
Msh3-201ENSMUST00000022220 Haus8Q99L00 373 aa11.2□□□□□ -0.62
Msh3-201ENSMUST00000022220 Znhit2Q9QY66 399 aa11.2□□□□□ -0.62
Msh3-201ENSMUST00000022220 Iigp1Q9QZ85 413 aa11.2□□□□□ -0.62
Msh3-201ENSMUST00000022220 Gipc1Q9Z0G0 333 aa11.2□□□□□ -0.62
Msh3-201ENSMUST00000022220 Dpy19l4A2AJQ3 722 aa11.2□□□□□ -0.62
Msh3-201ENSMUST00000022220 Apold1E9Q0X2 246 aa11.2□□□□□ -0.62
Msh3-201ENSMUST00000022220 Atxn10P28658 475 aa11.2□□□□□ -0.62
Msh3-201ENSMUST00000022220 Slc38a5Q3U1J0 479 aa11.2□□□□□ -0.62
Msh3-201ENSMUST00000022220 KizQ3UXL4 695 aa11.2□□□□□ -0.62
Msh3-201ENSMUST00000022220 Rexo4Q6PAQ4 432 aaKnown RBP11.2□□□□□ -0.62
Msh3-201ENSMUST00000022220 Kdm1bQ8CIG3 826 aa11.2□□□□□ -0.62
Msh3-201ENSMUST00000022220 Erich5Q8K0S2 362 aa11.2□□□□□ -0.62
Msh3-201ENSMUST00000022220 PhykplQ8R1K4 467 aa11.2□□□□□ -0.62
Msh3-201ENSMUST00000022220 Vmn1r203Q8R273 311 aa11.2□□□□□ -0.62
Msh3-201ENSMUST00000022220 Tesk2Q8VCT9 570 aa11.2□□□□□ -0.62
Msh3-201ENSMUST00000022220 Smap1Q91VZ6 440 aa11.2□□□□□ -0.62
Msh3-201ENSMUST00000022220 Msi2Q920Q6 346 aaKnown RBP11.2□□□□□ -0.62
Msh3-201ENSMUST00000022220 Ergic2Q9CR89 377 aa11.2□□□□□ -0.62
Msh3-201ENSMUST00000022220 Tubgcp4Q9D4F8 667 aa11.2□□□□□ -0.62
Msh3-201ENSMUST00000022220 Ccdc70Q9D9B0 223 aa11.2□□□□□ -0.62
Msh3-201ENSMUST00000022220 Capn7Q9R1S8 813 aa11.2□□□□□ -0.62
Msh3-201ENSMUST00000022220 Sstr1P30873 391 aa11.2□□□□□ -0.62
Msh3-201ENSMUST00000022220 Mpzl3Q3V3F6 237 aa11.2□□□□□ -0.62
Msh3-201ENSMUST00000022220 Fastkd1Q6DI86 829 aa11.2□□□□□ -0.62
Msh3-201ENSMUST00000022220 Ttyh3Q6P5F7 524 aa11.2□□□□□ -0.62
Msh3-201ENSMUST00000022220 B3glctQ8BHT6 489 aa11.2□□□□□ -0.62
Msh3-201ENSMUST00000022220 Kank2Q8BX02 843 aa11.2□□□□□ -0.62
Msh3-201ENSMUST00000022220 Pcdhb4Q91XZ6 784 aa11.2□□□□□ -0.62
Msh3-201ENSMUST00000022220 Pgm3Q9CYR6 542 aa11.2□□□□□ -0.62
Msh3-201ENSMUST00000022220 TfgQ9Z1A1 397 aa11.2□□□□□ -0.62
Msh3-201ENSMUST00000022220 Pdcd2P46718 343 aa11.19□□□□□ -0.62
Msh3-201ENSMUST00000022220 ZbbxQ0P5X5 716 aa11.19□□□□□ -0.62
Msh3-201ENSMUST00000022220 Tfdp2Q64163 446 aa11.19□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 41.7 ms