RNA–Protein interactions for RNA: ENSMUST00000013771.14

Trim54-201, Transcript of Tripartite motif-containing protein 54, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Trim54, Length 1,434 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54-201ENSMUST00000013771 PtprfA2A8L5 1898 aa17.71■□□□□ 0.42
Trim54-201ENSMUST00000013771 Notch4P31695 1964 aa17.7■□□□□ 0.42
Trim54-201ENSMUST00000013771 TomtA1Y9I9 258 aa17.7■□□□□ 0.42
Trim54-201ENSMUST00000013771 Krt13P08730 437 aa17.7■□□□□ 0.42
Trim54-201ENSMUST00000013771 Slc3a2P10852 526 aaKnown RBP17.7■□□□□ 0.42
Trim54-201ENSMUST00000013771 AvpP35455 168 aa17.7■□□□□ 0.42
Trim54-201ENSMUST00000013771 Sh3bp2Q06649 559 aa17.7■□□□□ 0.42
Trim54-201ENSMUST00000013771 Osgin2Q3TEE9 550 aa17.7■□□□□ 0.42
Trim54-201ENSMUST00000013771 Dab2ipQ3UHC7 1189 aa17.7■□□□□ 0.42
Trim54-201ENSMUST00000013771 Igbp1Q61249 340 aa17.7■□□□□ 0.42
Trim54-201ENSMUST00000013771 Atg9bQ6EBV9 922 aa17.7■□□□□ 0.42
Trim54-201ENSMUST00000013771 Kiaa0895Q7TQE7 519 aa17.7■□□□□ 0.42
Trim54-201ENSMUST00000013771 Arhgap15Q811M1 481 aa17.7■□□□□ 0.42
Trim54-201ENSMUST00000013771 Efcab14Q8BGQ6 484 aa17.7■□□□□ 0.42
Trim54-201ENSMUST00000013771 Edem2Q8BJT9 577 aa17.7■□□□□ 0.42
Trim54-201ENSMUST00000013771 MtrrQ8C1A3 696 aa17.7■□□□□ 0.42
Trim54-201ENSMUST00000013771 Rab3il1Q8VDV3 383 aa17.7■□□□□ 0.42
Trim54-201ENSMUST00000013771 Olfr356Q8VFP5 315 aa17.7■□□□□ 0.42
Trim54-201ENSMUST00000013771 Pcdha12Q91Y18 950 aa17.7■□□□□ 0.42
Trim54-201ENSMUST00000013771 Cts3Q91ZD5 332 aa17.7■□□□□ 0.42
Trim54-201ENSMUST00000013771 Rnf6Q9DBU5 667 aa17.7■□□□□ 0.42
Trim54-201ENSMUST00000013771 Fbxl12Q9EPX5 326 aa17.7■□□□□ 0.42
Trim54-201ENSMUST00000013771 Jph3Q9ET77 744 aa17.7■□□□□ 0.42
Trim54-201ENSMUST00000013771 Prl5a1Q9JII2 230 aa17.7■□□□□ 0.42
Trim54-201ENSMUST00000013771 PtprdQ64487 1912 aa17.7■□□□□ 0.42
Trim54-201ENSMUST00000013771 Myo10F8VQB6 2062 aa17.69■□□□□ 0.42
Trim54-201ENSMUST00000013771 Kat6aQ8BZ21 2003 aa17.69■□□□□ 0.42
Trim54-201ENSMUST00000013771 Bnc1O35914 961 aa17.69■□□□□ 0.42
Trim54-201ENSMUST00000013771 CkmP07310 381 aa17.69■□□□□ 0.42
Trim54-201ENSMUST00000013771 Lefty2P57785 368 aa17.69■□□□□ 0.42
Trim54-201ENSMUST00000013771 Lrch2Q3UMG5 773 aa17.69■□□□□ 0.42
Trim54-201ENSMUST00000013771 Rasa4Q6PFQ7 802 aa17.69■□□□□ 0.42
Trim54-201ENSMUST00000013771 Tmem74Q8BQU7 305 aa17.69■□□□□ 0.42
Trim54-201ENSMUST00000013771 Slc9a9Q8BZ00 644 aa17.69■□□□□ 0.42
Trim54-201ENSMUST00000013771 Traf3ip3Q8C0G2 513 aa17.69■□□□□ 0.42
Trim54-201ENSMUST00000013771 NelfbQ8C4Y3 580 aa17.69■□□□□ 0.42
Trim54-201ENSMUST00000013771 Lgi4Q8K1S1 537 aa17.69■□□□□ 0.42
Trim54-201ENSMUST00000013771 Twf1Q91YR1 350 aaKnown RBP17.69■□□□□ 0.42
Trim54-201ENSMUST00000013771 Tab2Q99K90 693 aa17.69■□□□□ 0.42
Trim54-201ENSMUST00000013771 GOLGA7BQ9D428 167 aa17.69■□□□□ 0.42
Trim54-201ENSMUST00000013771 Chd8Q09XV5 2582 aaKnown RBP17.69■□□□□ 0.42
Trim54-201ENSMUST00000013771 Gm36028A0A0U1RPM1 299 aa17.68■□□□□ 0.42
Trim54-201ENSMUST00000013771 Col9a3A2ACT7 680 aa17.68■□□□□ 0.42
Trim54-201ENSMUST00000013771 Trim30cD3YVI9 513 aa17.68■□□□□ 0.42
Trim54-201ENSMUST00000013771 GpiP06745 558 aaKnown RBP17.68■□□□□ 0.42
Trim54-201ENSMUST00000013771 Znf750Q8BH05 703 aa17.68■□□□□ 0.42
Trim54-201ENSMUST00000013771 Olfml3Q8BK62 406 aa17.68■□□□□ 0.42
Trim54-201ENSMUST00000013771 LarsQ8BMJ2 1178 aa17.68■□□□□ 0.42
Trim54-201ENSMUST00000013771 Rps6ka5Q8C050 863 aa17.68■□□□□ 0.42
Trim54-201ENSMUST00000013771 Pcyox1lQ8C7K6 495 aa17.68■□□□□ 0.42
Trim54-201ENSMUST00000013771 Sirt3Q8R104 334 aa17.68■□□□□ 0.42
Trim54-201ENSMUST00000013771 Snrnp25Q8VIK1 123 aa17.68■□□□□ 0.42
Trim54-201ENSMUST00000013771 Grpel1Q99LP6 217 aa17.68■□□□□ 0.42
Trim54-201ENSMUST00000013771 Lpin2Q99PI5 893 aa17.68■□□□□ 0.42
Trim54-201ENSMUST00000013771 CenpqQ9CPQ5 267 aa17.68■□□□□ 0.42
Trim54-201ENSMUST00000013771 Tpd52l2Q9CYZ2 220 aaKnown RBP17.68■□□□□ 0.42
Trim54-201ENSMUST00000013771 Gm2956E9PVJ0 216 aa17.67■□□□□ 0.42
Trim54-201ENSMUST00000013771 Gm10722F6VLK5 217 aa17.67■□□□□ 0.42
Trim54-201ENSMUST00000013771 Vmn1r176G3UW31 304 aa17.67■□□□□ 0.42
Trim54-201ENSMUST00000013771 Rrm1P07742 792 aa17.67■□□□□ 0.42
Trim54-201ENSMUST00000013771 Trim30aP15533 496 aa17.67■□□□□ 0.42
Trim54-201ENSMUST00000013771 Gdi1P50396 447 aa17.67■□□□□ 0.42
Trim54-201ENSMUST00000013771 Plk2P53351 682 aa17.67■□□□□ 0.42
Trim54-201ENSMUST00000013771 Mrps6P58064 125 aa17.67■□□□□ 0.42
Trim54-201ENSMUST00000013771 Tpm1P58771 284 aa17.67■□□□□ 0.42
Trim54-201ENSMUST00000013771 YwhagP61982 247 aaKnown RBP17.67■□□□□ 0.42
Trim54-201ENSMUST00000013771 Gjb5Q02739 271 aa17.67■□□□□ 0.42
Trim54-201ENSMUST00000013771 Zfp217Q3U0X6 1041 aa17.67■□□□□ 0.42
Trim54-201ENSMUST00000013771 Olfr121Q5CZY0 321 aa17.67■□□□□ 0.42
Trim54-201ENSMUST00000013771 Fam46cQ5SSF7 391 aa17.67■□□□□ 0.42
Trim54-201ENSMUST00000013771 DbhQ64237 622 aa17.67■□□□□ 0.42
Trim54-201ENSMUST00000013771 Rhbdf1Q6PIX5 856 aa17.67■□□□□ 0.42
Trim54-201ENSMUST00000013771 Armcx3Q8BHS6 379 aa17.67■□□□□ 0.42
Trim54-201ENSMUST00000013771 Drd5Q8BLD9 478 aa17.67■□□□□ 0.42
Trim54-201ENSMUST00000013771 Kctd6Q8BNL5 237 aa17.67■□□□□ 0.42
Trim54-201ENSMUST00000013771 Mtrf1Q8K126 446 aa17.67■□□□□ 0.42
Trim54-201ENSMUST00000013771 Mtmr6Q8VE11 617 aa17.67■□□□□ 0.42
Trim54-201ENSMUST00000013771 Pth2rQ91V95 546 aa17.67■□□□□ 0.42
Trim54-201ENSMUST00000013771 PigkQ9CXY9 395 aa17.67■□□□□ 0.42
Trim54-201ENSMUST00000013771 Gria3Q9Z2W9 888 aa17.67■□□□□ 0.42
Trim54-201ENSMUST00000013771 Itpr1P11881 2749 aa17.67■□□□□ 0.42
Trim54-201ENSMUST00000013771 Alms1Q8K4E0 3251 aa17.66■□□□□ 0.42
Trim54-201ENSMUST00000013771 Igkv10-95A0A0G2JFY3 115 aa17.66■□□□□ 0.42
Trim54-201ENSMUST00000013771 5830411N06RikB3F5L4 1112 aa17.66■□□□□ 0.42
Trim54-201ENSMUST00000013771 Ccdc191J3QQ27 883 aa17.66■□□□□ 0.42
Trim54-201ENSMUST00000013771 Vmn2r54K7N649 806 aa17.66■□□□□ 0.42
Trim54-201ENSMUST00000013771 Gm8108K7N734 216 aa17.66■□□□□ 0.42
Trim54-201ENSMUST00000013771 Coro1aO89053 461 aa17.66■□□□□ 0.42
Trim54-201ENSMUST00000013771 Gabrg2P22723 474 aa17.66■□□□□ 0.42
Trim54-201ENSMUST00000013771 HccsP53702 272 aa17.66■□□□□ 0.42
Trim54-201ENSMUST00000013771 Fermt1P59113 677 aa17.66■□□□□ 0.42
Trim54-201ENSMUST00000013771 Hrh2P97292 397 aa17.66■□□□□ 0.42
Trim54-201ENSMUST00000013771 Tstd2Q3U269 495 aa17.66■□□□□ 0.42
Trim54-201ENSMUST00000013771 Taar7aQ5QD12 358 aa17.66■□□□□ 0.42
Trim54-201ENSMUST00000013771 Sh3gl3Q62421 347 aa17.66■□□□□ 0.42
Trim54-201ENSMUST00000013771 Xpo1Q6P5F9 1071 aaKnown RBP17.66■□□□□ 0.42
Trim54-201ENSMUST00000013771 Tmeff1Q6PFE7 372 aa17.66■□□□□ 0.42
Trim54-201ENSMUST00000013771 Apol9bQ8C7I4 310 aa17.66■□□□□ 0.42
Trim54-201ENSMUST00000013771 Kctd15Q8K0E1 283 aa17.66■□□□□ 0.42
Trim54-201ENSMUST00000013771 Fam114a2Q8VE88 497 aa17.66■□□□□ 0.42
Retrieved 100 of 22,080 RNA–protein pairs in 48.8 ms