RNA–Protein interactions for RNA: ENST00000640748.1

ERGIC3-220, Transcript of ERGIC and golgi 3, humanhuman

TSL 5 BASIC

Gene ERGIC3, Length 832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-220ENST00000640748 DCDC2BA2VCK2 349 aa12.51□□□□□ -0.41
ERGIC3-220ENST00000640748 CHURC1-FNTBB4DL54 471 aa12.51□□□□□ -0.41
ERGIC3-220ENST00000640748 SRGAP2O75044 1071 aa12.51□□□□□ -0.41
ERGIC3-220ENST00000640748 PAPSS2O95340 614 aaPredicted RBP12.51□□□□□ -0.41
ERGIC3-220ENST00000640748 PRAMEF12O95522 483 aa12.51□□□□□ -0.41
ERGIC3-220ENST00000640748 FTCDO95954 541 aa12.51□□□□□ -0.41
ERGIC3-220ENST00000640748 CALCAP01258 141 aa12.51□□□□□ -0.41
ERGIC3-220ENST00000640748 CYP1A1P04798 512 aaPredicted RBP12.51□□□□□ -0.41
ERGIC3-220ENST00000640748 MYBL1P10243 752 aa12.51□□□□□ -0.41
ERGIC3-220ENST00000640748 UNGP13051 313 aaPredicted RBP12.51□□□□□ -0.41
ERGIC3-220ENST00000640748 SDHBP21912 280 aa12.51□□□□□ -0.41
ERGIC3-220ENST00000640748 CTHP32929 405 aa12.51□□□□□ -0.41
ERGIC3-220ENST00000640748 FNTBP49356 437 aa12.51□□□□□ -0.41
ERGIC3-220ENST00000640748 EPHB3P54753 998 aa12.51□□□□□ -0.41
ERGIC3-220ENST00000640748 LILRA4P59901 499 aa12.51□□□□□ -0.41
ERGIC3-220ENST00000640748 TNNC1P63316 161 aa12.51□□□□□ -0.41
ERGIC3-220ENST00000640748 SPEM2Q0P670 501 aa12.51□□□□□ -0.41
ERGIC3-220ENST00000640748 MYO1EQ12965 1108 aa12.51□□□□□ -0.41
ERGIC3-220ENST00000640748 SRSF5Q13243 272 aaKnown RBP12.51□□□□□ -0.41
ERGIC3-220ENST00000640748 PLD1Q13393 1074 aa12.51□□□□□ -0.41
ERGIC3-220ENST00000640748 WDR72Q3MJ13 1102 aa12.51□□□□□ -0.41
ERGIC3-220ENST00000640748 LAIR1Q6GTX8 287 aa12.51□□□□□ -0.41
ERGIC3-220ENST00000640748 OVOS1Q6IE37 1185 aa12.51□□□□□ -0.41
ERGIC3-220ENST00000640748 DNAJB7Q7Z6W7 309 aaPredicted RBP12.51□□□□□ -0.41
ERGIC3-220ENST00000640748 SLFN11Q7Z7L1 901 aa12.51□□□□□ -0.41
ERGIC3-220ENST00000640748 SPEM1Q8N4L4 309 aa12.51□□□□□ -0.41
ERGIC3-220ENST00000640748 TTC39CQ8N584 583 aa12.51□□□□□ -0.41
ERGIC3-220ENST00000640748 LRRC57Q8N9N7 239 aa12.51□□□□□ -0.41
ERGIC3-220ENST00000640748 LRRN4CLQ8ND94 238 aa12.51□□□□□ -0.41
ERGIC3-220ENST00000640748 TSC1Q92574 1164 aa12.51□□□□□ -0.41
ERGIC3-220ENST00000640748 PSMG2Q969U7 264 aa12.51□□□□□ -0.41
ERGIC3-220ENST00000640748 E2F7Q96AV8 911 aa12.51□□□□□ -0.41
ERGIC3-220ENST00000640748 ZNF653Q96CK0 615 aa12.51□□□□□ -0.41
ERGIC3-220ENST00000640748 HPDLQ96IR7 371 aa12.51□□□□□ -0.41
ERGIC3-220ENST00000640748 ZFYVE19Q96K21 471 aa12.51□□□□□ -0.41
ERGIC3-220ENST00000640748 OSBPL9Q96SU4 736 aa12.51□□□□□ -0.41
ERGIC3-220ENST00000640748 TLR10Q9BXR5 811 aa12.51□□□□□ -0.41
ERGIC3-220ENST00000640748 CTTNBP2NLQ9P2B4 639 aa12.51□□□□□ -0.41
ERGIC3-220ENST00000640748 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.51□□□□□ -0.41
ERGIC3-220ENST00000640748 GMEB2Q9UKD1 530 aa12.51□□□□□ -0.41
ERGIC3-220ENST00000640748 GTF3C4Q9UKN8 822 aa12.51□□□□□ -0.41
ERGIC3-220ENST00000640748 AMFRQ9UKV5 643 aa12.51□□□□□ -0.41
ERGIC3-220ENST00000640748 CDV3Q9UKY7 258 aaKnown RBP12.51□□□□□ -0.41
ERGIC3-220ENST00000640748 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.51□□□□□ -0.41
ERGIC3-220ENST00000640748 V9GYY5 206 aaPredicted RBP12.51□□□□□ -0.41
ERGIC3-220ENST00000640748 SPECC1L-ADORA2AF8WAN1 911 aa12.5□□□□□ -0.41
ERGIC3-220ENST00000640748 PIRO00625 290 aa12.5□□□□□ -0.41
ERGIC3-220ENST00000640748 MED7O43513 233 aa12.5□□□□□ -0.41
ERGIC3-220ENST00000640748 MTA2O94776 668 aa12.5□□□□□ -0.41
ERGIC3-220ENST00000640748 CYP1A2P05177 515 aa12.5□□□□□ -0.41
ERGIC3-220ENST00000640748 PAEPP09466 180 aa12.5□□□□□ -0.41
ERGIC3-220ENST00000640748 PAFAH1B1P43034 410 aa12.5□□□□□ -0.41
ERGIC3-220ENST00000640748 NSFP46459 744 aaKnown RBP12.5□□□□□ -0.41
ERGIC3-220ENST00000640748 CDR1P51861 262 aa12.5□□□□□ -0.41
ERGIC3-220ENST00000640748 CENPCQ03188 943 aa12.5□□□□□ -0.41
ERGIC3-220ENST00000640748 CCINQ13939 588 aa12.5□□□□□ -0.41
ERGIC3-220ENST00000640748 PPP2R5DQ14738 602 aa12.5□□□□□ -0.41
ERGIC3-220ENST00000640748 RPS6KA1Q15418 735 aa12.5□□□□□ -0.41
ERGIC3-220ENST00000640748 TEX35Q5T0J7 233 aa12.5□□□□□ -0.41
ERGIC3-220ENST00000640748 DSTYKQ6XUX3 929 aa12.5□□□□□ -0.41
ERGIC3-220ENST00000640748 RSRC2Q7L4I2 434 aaKnown RBP12.5□□□□□ -0.41
ERGIC3-220ENST00000640748 PEX26Q7Z412 305 aa12.5□□□□□ -0.41
ERGIC3-220ENST00000640748 DAAM2Q86T65 1068 aa12.5□□□□□ -0.41
ERGIC3-220ENST00000640748 LRRC52Q8N7C0 313 aa12.5□□□□□ -0.41
ERGIC3-220ENST00000640748 TTC8Q8TAM2 541 aa12.5□□□□□ -0.41
ERGIC3-220ENST00000640748 CSGALNACT1Q8TDX6 532 aa12.5□□□□□ -0.41
ERGIC3-220ENST00000640748 UBE2Q2Q8WVN8 375 aa12.5□□□□□ -0.41
ERGIC3-220ENST00000640748 ZNF606Q8WXB4 792 aa12.5□□□□□ -0.41
ERGIC3-220ENST00000640748 MSANTD3Q96H12 275 aa12.5□□□□□ -0.41
ERGIC3-220ENST00000640748 CAPZA3Q96KX2 299 aa12.5□□□□□ -0.41
ERGIC3-220ENST00000640748 SENP8Q96LD8 212 aa12.5□□□□□ -0.41
ERGIC3-220ENST00000640748 RTKNQ9BST9 563 aa12.5□□□□□ -0.41
ERGIC3-220ENST00000640748 C8orf33Q9H7E9 229 aaPredicted RBP12.5□□□□□ -0.41
ERGIC3-220ENST00000640748 IL21Q9HBE4 155 aa12.5□□□□□ -0.41
ERGIC3-220ENST00000640748 OSGEPQ9NPF4 335 aa12.5□□□□□ -0.41
ERGIC3-220ENST00000640748 GTSE1Q9NYZ3 720 aa12.5□□□□□ -0.41
ERGIC3-220ENST00000640748 UVRAGQ9P2Y5 699 aa12.5□□□□□ -0.41
ERGIC3-220ENST00000640748 RNF14Q9UBS8 474 aa12.5□□□□□ -0.41
ERGIC3-220ENST00000640748 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.5□□□□□ -0.41
ERGIC3-220ENST00000640748 TSC2P49815 1807 aa12.49□□□□□ -0.41
ERGIC3-220ENST00000640748 CES2O00748 559 aa12.49□□□□□ -0.41
ERGIC3-220ENST00000640748 BUB1BO60566 1050 aaPredicted RBP12.49□□□□□ -0.41
ERGIC3-220ENST00000640748 CYP11A1P05108 521 aa12.49□□□□□ -0.41
ERGIC3-220ENST00000640748 RETP07949 1114 aa12.49□□□□□ -0.41
ERGIC3-220ENST00000640748 ATF6P18850 670 aa12.49□□□□□ -0.41
ERGIC3-220ENST00000640748 RAP1GAPP47736 663 aa12.49□□□□□ -0.41
ERGIC3-220ENST00000640748 ALDH1A3P47895 512 aa12.49□□□□□ -0.41
ERGIC3-220ENST00000640748 KPNA1P52294 538 aaPredicted RBP12.49□□□□□ -0.41
ERGIC3-220ENST00000640748 NOMO3P69849 1222 aa12.49□□□□□ -0.41
ERGIC3-220ENST00000640748 TNK2Q07912 1038 aa12.49□□□□□ -0.41
ERGIC3-220ENST00000640748 SIM2Q14190 667 aaPredicted RBP12.49□□□□□ -0.41
ERGIC3-220ENST00000640748 NAA30Q147X3 362 aaPredicted RBP12.49□□□□□ -0.41
ERGIC3-220ENST00000640748 ELF2Q15723 593 aa12.49□□□□□ -0.41
ERGIC3-220ENST00000640748 ERCC6LQ2NKX8 1250 aa12.49□□□□□ -0.41
ERGIC3-220ENST00000640748 ZNF394Q53GI3 561 aa12.49□□□□□ -0.41
ERGIC3-220ENST00000640748 GPR158Q5T848 1215 aa12.49□□□□□ -0.41
ERGIC3-220ENST00000640748 CCDC181Q5TID7 509 aa12.49□□□□□ -0.41
ERGIC3-220ENST00000640748 NAA35Q5VZE5 725 aa12.49□□□□□ -0.41
ERGIC3-220ENST00000640748 C9orf57Q5W0N0 161 aa12.49□□□□□ -0.41
ERGIC3-220ENST00000640748 C11orf63Q6NUN7 778 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms