RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 ZNF408Q9H9D4 720 aa8.52□□□□□ -1.05
NECAP1-227ENST00000640648 CYLDQ9NQC7 956 aa8.52□□□□□ -1.05
NECAP1-227ENST00000640648 IFT52Q9Y366 437 aa8.52□□□□□ -1.05
NECAP1-227ENST00000640648 ZBTB39O15060 712 aa8.51□□□□□ -1.05
NECAP1-227ENST00000640648 YAP1P46937 504 aaKnown RBP8.51□□□□□ -1.05
NECAP1-227ENST00000640648 HERVK_113P62684 666 aa8.51□□□□□ -1.05
NECAP1-227ENST00000640648 TRIM25Q14258 630 aaKnown RBP8.51□□□□□ -1.05
NECAP1-227ENST00000640648 SMAD1Q15797 465 aaKnown RBP8.51□□□□□ -1.05
NECAP1-227ENST00000640648 CCDC58Q4VC31 144 aa8.51□□□□□ -1.05
NECAP1-227ENST00000640648 TMEM179Q6ZVK1 233 aa8.51□□□□□ -1.05
NECAP1-227ENST00000640648 RHOT1Q8IXI2 618 aa8.51□□□□□ -1.05
NECAP1-227ENST00000640648 C7orf31Q8N865 590 aa8.51□□□□□ -1.05
NECAP1-227ENST00000640648 SLC35G2Q8TBE7 412 aa8.51□□□□□ -1.05
NECAP1-227ENST00000640648 TRUB1Q8WWH5 349 aaKnown RBP8.51□□□□□ -1.05
NECAP1-227ENST00000640648 FAM20AQ96MK3 541 aa8.51□□□□□ -1.05
NECAP1-227ENST00000640648 BCL7BQ9BQE9 202 aa8.51□□□□□ -1.05
NECAP1-227ENST00000640648 EIF2AK1Q9BQI3 630 aaKnown RBP8.51□□□□□ -1.05
NECAP1-227ENST00000640648 BDH2Q9BUT1 245 aa8.51□□□□□ -1.05
NECAP1-227ENST00000640648 APOL6Q9BWW8 343 aa8.51□□□□□ -1.05
NECAP1-227ENST00000640648 AGXT2Q9BYV1 514 aa8.51□□□□□ -1.05
NECAP1-227ENST00000640648 SLA2Q9H6Q3 261 aa8.51□□□□□ -1.05
NECAP1-227ENST00000640648 TDRD3Q9H7E2 651 aaKnown RBP8.51□□□□□ -1.05
NECAP1-227ENST00000640648 IVNS1ABPQ9Y6Y0 642 aa8.51□□□□□ -1.05
NECAP1-227ENST00000640648 AGPSO00116 658 aa8.51□□□□□ -1.05
NECAP1-227ENST00000640648 CLOCKO15516 846 aa8.51□□□□□ -1.05
NECAP1-227ENST00000640648 CCND2P30279 289 aa8.51□□□□□ -1.05
NECAP1-227ENST00000640648 PRELPP51888 382 aa8.51□□□□□ -1.05
NECAP1-227ENST00000640648 VAC14Q08AM6 782 aa8.51□□□□□ -1.05
NECAP1-227ENST00000640648 C6orf52Q5T4I8 152 aa8.51□□□□□ -1.05
NECAP1-227ENST00000640648 GARNL3Q5VVW2 1013 aa8.51□□□□□ -1.05
NECAP1-227ENST00000640648 SDE2Q6IQ49 451 aa8.51□□□□□ -1.05
NECAP1-227ENST00000640648 RFX8Q6ZV50 586 aa8.51□□□□□ -1.05
NECAP1-227ENST00000640648 RAB43Q86YS6 212 aa8.51□□□□□ -1.05
NECAP1-227ENST00000640648 COLGALT2Q8IYK4 626 aa8.51□□□□□ -1.05
NECAP1-227ENST00000640648 ASCC1Q8N9N2 400 aaKnown RBP8.51□□□□□ -1.05
NECAP1-227ENST00000640648 TPCN2Q8NHX9 752 aa8.51□□□□□ -1.05
NECAP1-227ENST00000640648 ARL5BQ96KC2 179 aa8.51□□□□□ -1.05
NECAP1-227ENST00000640648 MKNK1Q9BUB5 465 aa8.51□□□□□ -1.05
NECAP1-227ENST00000640648 ALG13Q9NP73 1137 aaKnown RBP8.51□□□□□ -1.05
NECAP1-227ENST00000640648 VTI1BQ9UEU0 232 aa8.51□□□□□ -1.05
NECAP1-227ENST00000640648 FAM32AQ9Y421 112 aaKnown RBP8.51□□□□□ -1.05
NECAP1-227ENST00000640648 SLC30A1Q9Y6M5 507 aa8.51□□□□□ -1.05
NECAP1-227ENST00000640648 KIAA1210Q9ULL0 1709 aa8.51□□□□□ -1.05
NECAP1-227ENST00000640648 A0A087X0T9 212 aa8.51□□□□□ -1.05
NECAP1-227ENST00000640648 A0A0J9YVX5 310 aa8.51□□□□□ -1.05
NECAP1-227ENST00000640648 A0A0U1RQJ8 604 aa8.51□□□□□ -1.05
NECAP1-227ENST00000640648 FAM47E-STBD1D6RA91 191 aa8.51□□□□□ -1.05
NECAP1-227ENST00000640648 K7ERI5 159 aa8.51□□□□□ -1.05
NECAP1-227ENST00000640648 CSDE1O75534 798 aaKnown RBP8.51□□□□□ -1.05
NECAP1-227ENST00000640648 SEC24AO95486 1093 aa8.51□□□□□ -1.05
NECAP1-227ENST00000640648 NPR3P17342 541 aa8.51□□□□□ -1.05
NECAP1-227ENST00000640648 KCNJ1P48048 391 aa8.51□□□□□ -1.05
NECAP1-227ENST00000640648 RXRGP48443 463 aa8.51□□□□□ -1.05
NECAP1-227ENST00000640648 KPNA1P52294 538 aaPredicted RBP8.51□□□□□ -1.05
NECAP1-227ENST00000640648 OR6B2Q6IFH4 312 aa8.51□□□□□ -1.05
NECAP1-227ENST00000640648 RAPH1Q70E73 1250 aa8.51□□□□□ -1.05
NECAP1-227ENST00000640648 ZNF767PQ75MW2 155 aa8.51□□□□□ -1.05
NECAP1-227ENST00000640648 PACRGLQ8N7B6 248 aa8.51□□□□□ -1.05
NECAP1-227ENST00000640648 OR7G1Q8NGA0 311 aa8.51□□□□□ -1.05
NECAP1-227ENST00000640648 CNDP1Q96KN2 507 aa8.51□□□□□ -1.05
NECAP1-227ENST00000640648 NGRNQ9NPE2 291 aaKnown RBP8.51□□□□□ -1.05
NECAP1-227ENST00000640648 NRBP2Q9NSY0 501 aa8.51□□□□□ -1.05
NECAP1-227ENST00000640648 FIS1Q9Y3D6 152 aa8.51□□□□□ -1.05
NECAP1-227ENST00000640648 AP4B1Q9Y6B7 739 aa8.51□□□□□ -1.05
NECAP1-227ENST00000640648 DIP2BQ9P265 1576 aa8.51□□□□□ -1.05
NECAP1-227ENST00000640648 BTN3A3O00478 584 aa8.51□□□□□ -1.05
NECAP1-227ENST00000640648 CYP26A1O43174 497 aa8.51□□□□□ -1.05
NECAP1-227ENST00000640648 SEMA3DO95025 777 aa8.51□□□□□ -1.05
NECAP1-227ENST00000640648 MSH3P20585 1137 aa8.51□□□□□ -1.05
NECAP1-227ENST00000640648 TNFAIP1Q13829 316 aa8.51□□□□□ -1.05
NECAP1-227ENST00000640648 EARS2Q5JPH6 523 aaKnown RBP8.51□□□□□ -1.05
NECAP1-227ENST00000640648 LMBRD2Q68DH5 695 aaPredicted RBP8.51□□□□□ -1.05
NECAP1-227ENST00000640648 GJB7Q6PEY0 223 aa8.51□□□□□ -1.05
NECAP1-227ENST00000640648 ERO1BQ86YB8 467 aa8.51□□□□□ -1.05
NECAP1-227ENST00000640648 MMAAQ8IVH4 418 aaKnown RBP8.51□□□□□ -1.05
NECAP1-227ENST00000640648 POC5Q8NA72 575 aa8.51□□□□□ -1.05
NECAP1-227ENST00000640648 C9orf72Q96LT7 481 aa8.51□□□□□ -1.05
NECAP1-227ENST00000640648 REEP2Q9BRK0 252 aa8.51□□□□□ -1.05
NECAP1-227ENST00000640648 SLC4A5Q9BY07 1137 aa8.51□□□□□ -1.05
NECAP1-227ENST00000640648 PACSIN1Q9BY11 444 aa8.51□□□□□ -1.05
NECAP1-227ENST00000640648 SP140LQ9H930 580 aa8.51□□□□□ -1.05
NECAP1-227ENST00000640648 NARFQ9UHQ1 456 aa8.51□□□□□ -1.05
NECAP1-227ENST00000640648 AFG3L2Q9Y4W6 797 aa8.51□□□□□ -1.05
NECAP1-227ENST00000640648 NBNO60934 754 aa8.5□□□□□ -1.05
NECAP1-227ENST00000640648 TMCC2O75069 709 aa8.5□□□□□ -1.05
NECAP1-227ENST00000640648 RPS6KA4O75676 772 aa8.5□□□□□ -1.05
NECAP1-227ENST00000640648 MYBP10242 640 aa8.5□□□□□ -1.05
NECAP1-227ENST00000640648 KITP10721 976 aa8.5□□□□□ -1.05
NECAP1-227ENST00000640648 PSMA2P25787 234 aa8.5□□□□□ -1.05
NECAP1-227ENST00000640648 RELAQ04206 551 aa8.5□□□□□ -1.05
NECAP1-227ENST00000640648 GPS1Q13098 491 aa8.5□□□□□ -1.05
NECAP1-227ENST00000640648 RFX4Q33E94 735 aa8.5□□□□□ -1.05
NECAP1-227ENST00000640648 MROH9Q5TGP6 573 aa8.5□□□□□ -1.05
NECAP1-227ENST00000640648 PDXDC2PQ6P474 469 aa8.5□□□□□ -1.05
NECAP1-227ENST00000640648 DNAAF5Q86Y56 855 aa8.5□□□□□ -1.05
NECAP1-227ENST00000640648 MCUQ8NE86 351 aa8.5□□□□□ -1.05
NECAP1-227ENST00000640648 KBTBD7Q8WVZ9 684 aa8.5□□□□□ -1.05
NECAP1-227ENST00000640648 PGBD4Q96DM1 585 aa8.5□□□□□ -1.05
NECAP1-227ENST00000640648 WNK4Q96J92 1243 aa8.5□□□□□ -1.05
NECAP1-227ENST00000640648 ZNF512BQ96KM6 892 aaPredicted RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms