RNA–Protein interactions for RNA: ENST00000638939.1

PDE4D-229, Transcript of phosphodiesterase 4D, humanhuman

TSL 5 BASIC

Gene PDE4D, Length 375 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-229ENST00000638939 HOXD13P35453 343 aa5.83□□□□□ -1.48
PDE4D-229ENST00000638939 GRIA2P42262 883 aa5.83□□□□□ -1.48
PDE4D-229ENST00000638939 CACNA2D1P54289 1103 aa5.83□□□□□ -1.48
PDE4D-229ENST00000638939 RAB15P59190 212 aa5.83□□□□□ -1.48
PDE4D-229ENST00000638939 SNRPFP62306 86 aaKnown RBP5.83□□□□□ -1.48
PDE4D-229ENST00000638939 TNNC1P63316 161 aa5.83□□□□□ -1.48
PDE4D-229ENST00000638939 IRX4P78413 519 aa5.83□□□□□ -1.48
PDE4D-229ENST00000638939 KDSRQ06136 332 aa5.83□□□□□ -1.48
PDE4D-229ENST00000638939 TAF10Q12962 218 aa5.83□□□□□ -1.48
PDE4D-229ENST00000638939 SEMA3BQ13214 749 aa5.83□□□□□ -1.48
PDE4D-229ENST00000638939 CUL4AQ13619 759 aa5.83□□□□□ -1.48
PDE4D-229ENST00000638939 PSMD6Q15008 389 aa5.83□□□□□ -1.48
PDE4D-229ENST00000638939 SNRNP35Q16560 246 aaKnown RBP5.83□□□□□ -1.48
PDE4D-229ENST00000638939 TSNAXIP1Q2TAA8 658 aa5.83□□□□□ -1.48
PDE4D-229ENST00000638939 MDH1BQ5I0G3 518 aa5.83□□□□□ -1.48
PDE4D-229ENST00000638939 TDRD10Q5VZ19 366 aaKnown RBP5.83□□□□□ -1.48
PDE4D-229ENST00000638939 RHBDF2Q6PJF5 856 aa5.83□□□□□ -1.48
PDE4D-229ENST00000638939 SLC36A4Q6YBV0 504 aa5.83□□□□□ -1.48
PDE4D-229ENST00000638939 EPM2AIP1Q7L775 607 aaPredicted RBP5.83□□□□□ -1.48
PDE4D-229ENST00000638939 TRAPPC11Q7Z392 1133 aa5.83□□□□□ -1.48
PDE4D-229ENST00000638939 PIP4P1Q86T03 277 aa5.83□□□□□ -1.48
PDE4D-229ENST00000638939 SFTPA1Q8IWL2 248 aa5.83□□□□□ -1.48
PDE4D-229ENST00000638939 ADGRG2Q8IZP9 1017 aa5.83□□□□□ -1.48
PDE4D-229ENST00000638939 CCDC33Q8N5R6 958 aa5.83□□□□□ -1.48
PDE4D-229ENST00000638939 TERB1Q8NA31 727 aa5.83□□□□□ -1.48
PDE4D-229ENST00000638939 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.83□□□□□ -1.48
PDE4D-229ENST00000638939 B3GALNT2Q8NCR0 500 aa5.83□□□□□ -1.48
PDE4D-229ENST00000638939 CEP76Q8TAP6 659 aa5.83□□□□□ -1.48
PDE4D-229ENST00000638939 SCG3Q8WXD2 468 aaKnown RBP5.83□□□□□ -1.48
PDE4D-229ENST00000638939 ZCCHC14Q8WYQ9 949 aaKnown RBP5.83□□□□□ -1.48
PDE4D-229ENST00000638939 PIGKQ92643 395 aa5.83□□□□□ -1.48
PDE4D-229ENST00000638939 FRMD6Q96NE9 622 aa5.83□□□□□ -1.48
PDE4D-229ENST00000638939 MMS19Q96T76 1030 aa5.83□□□□□ -1.48
PDE4D-229ENST00000638939 CGRRF1Q99675 332 aa5.83□□□□□ -1.48
PDE4D-229ENST00000638939 MRPL45Q9BRJ2 306 aaKnown RBP5.83□□□□□ -1.48
PDE4D-229ENST00000638939 SCNM1Q9BWG6 230 aa5.83□□□□□ -1.48
PDE4D-229ENST00000638939 KRTAP3-3Q9BYR6 98 aa5.83□□□□□ -1.48
PDE4D-229ENST00000638939 KRTAP3-2Q9BYR7 98 aa5.83□□□□□ -1.48
PDE4D-229ENST00000638939 RNF38Q9H0F5 515 aa5.83□□□□□ -1.48
PDE4D-229ENST00000638939 CUEDC2Q9H467 287 aa5.83□□□□□ -1.48
PDE4D-229ENST00000638939 PCIF1Q9H4Z3 704 aa5.83□□□□□ -1.48
PDE4D-229ENST00000638939 SLC32A1Q9H598 525 aa5.83□□□□□ -1.48
PDE4D-229ENST00000638939 UPF2Q9HAU5 1272 aaKnown RBP5.83□□□□□ -1.48
PDE4D-229ENST00000638939 CAPN10Q9HC96 672 aa5.83□□□□□ -1.48
PDE4D-229ENST00000638939 ARHGEF4Q9NR80 690 aa5.83□□□□□ -1.48
PDE4D-229ENST00000638939 AGPAT3Q9NRZ7 376 aa5.83□□□□□ -1.48
PDE4D-229ENST00000638939 KBTBD4Q9NVX7 518 aa5.83□□□□□ -1.48
PDE4D-229ENST00000638939 FAM13BQ9NYF5 915 aa5.83□□□□□ -1.48
PDE4D-229ENST00000638939 IL37Q9NZH6 218 aa5.83□□□□□ -1.48
PDE4D-229ENST00000638939 BCCIPQ9P287 314 aaKnown RBP eCLIP5.83□□□□□ -1.48
PDE4D-229ENST00000638939 CFAP97Q9P2B7 532 aa5.83□□□□□ -1.48
PDE4D-229ENST00000638939 SEPT3Q9UH03 358 aa5.83□□□□□ -1.48
PDE4D-229ENST00000638939 MBD1Q9UIS9 605 aaPredicted RBP5.83□□□□□ -1.48
PDE4D-229ENST00000638939 PILRBQ9UKJ0 227 aa5.83□□□□□ -1.48
PDE4D-229ENST00000638939 INVSQ9Y283 1065 aa5.83□□□□□ -1.48
PDE4D-229ENST00000638939 NME7Q9Y5B8 376 aa5.83□□□□□ -1.48
PDE4D-229ENST00000638939 SHROOM3Q8TF72 1996 aa5.83□□□□□ -1.48
PDE4D-229ENST00000638939 ATMQ13315 3056 aa5.83□□□□□ -1.48
PDE4D-229ENST00000638939 SETXQ7Z333 2677 aaKnown RBP5.82□□□□□ -1.48
PDE4D-229ENST00000638939 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.82□□□□□ -1.48
PDE4D-229ENST00000638939 FAM221BA6H8Z2 402 aa5.82□□□□□ -1.48
PDE4D-229ENST00000638939 ANTXRLA6NF34 631 aa5.82□□□□□ -1.48
PDE4D-229ENST00000638939 CACNG3O60359 315 aa5.82□□□□□ -1.48
PDE4D-229ENST00000638939 TULP3O75386 442 aa5.82□□□□□ -1.48
PDE4D-229ENST00000638939 PRPF6O94906 941 aaKnown RBP5.82□□□□□ -1.48
PDE4D-229ENST00000638939 SERPINF2P08697 491 aa5.82□□□□□ -1.48
PDE4D-229ENST00000638939 ZDHHC11BP0C7U3 371 aa5.82□□□□□ -1.48
PDE4D-229ENST00000638939 MBL2P11226 248 aaPredicted RBP5.82□□□□□ -1.48
PDE4D-229ENST00000638939 HOXB2P14652 356 aa5.82□□□□□ -1.48
PDE4D-229ENST00000638939 PTPN1P18031 435 aaKnown RBP5.82□□□□□ -1.48
PDE4D-229ENST00000638939 SPINK2P20155 84 aa5.82□□□□□ -1.48
PDE4D-229ENST00000638939 ITPKAP23677 461 aa5.82□□□□□ -1.48
PDE4D-229ENST00000638939 YWHAQP27348 245 aa5.82□□□□□ -1.48
PDE4D-229ENST00000638939 ERCC5P28715 1186 aaPredicted RBP5.82□□□□□ -1.48
PDE4D-229ENST00000638939 ATICP31939 592 aa5.82□□□□□ -1.48
PDE4D-229ENST00000638939 GNL1P36915 607 aaPredicted RBP5.82□□□□□ -1.48
PDE4D-229ENST00000638939 PTGER3P43115 390 aa5.82□□□□□ -1.48
PDE4D-229ENST00000638939 NASPP49321 788 aaPredicted RBP5.82□□□□□ -1.48
PDE4D-229ENST00000638939 SLC5A3P53794 718 aa5.82□□□□□ -1.48
PDE4D-229ENST00000638939 PSMA6P60900 246 aaKnown RBP5.82□□□□□ -1.48
PDE4D-229ENST00000638939 GAD2Q05329 585 aa5.82□□□□□ -1.48
PDE4D-229ENST00000638939 CYP24A1Q07973 514 aa5.82□□□□□ -1.48
PDE4D-229ENST00000638939 EHHADHQ08426 723 aa5.82□□□□□ -1.48
PDE4D-229ENST00000638939 HNRNPDQ14103 355 aaKnown RBP5.82□□□□□ -1.48
PDE4D-229ENST00000638939 SLC39A14Q15043 492 aa5.82□□□□□ -1.48
PDE4D-229ENST00000638939 HIF1AQ16665 826 aa5.82□□□□□ -1.48
PDE4D-229ENST00000638939 DUOXA1Q1HG43 343 aa5.82□□□□□ -1.48
PDE4D-229ENST00000638939 BMT2Q1RMZ1 405 aa5.82□□□□□ -1.48
PDE4D-229ENST00000638939 FAM26FQ5R3K3 315 aa5.82□□□□□ -1.48
PDE4D-229ENST00000638939 LY6G5CQ5SRR4 150 aa5.82□□□□□ -1.48
PDE4D-229ENST00000638939 BTBD8Q5XKL5 378 aa5.82□□□□□ -1.48
PDE4D-229ENST00000638939 HS2ST1Q7LGA3 356 aa5.82□□□□□ -1.48
PDE4D-229ENST00000638939 FAM35AQ86V20 835 aa5.82□□□□□ -1.48
PDE4D-229ENST00000638939 C12orf56Q8IXR9 622 aa5.82□□□□□ -1.48
PDE4D-229ENST00000638939 TMEFF1Q8IYR6 380 aa5.82□□□□□ -1.48
PDE4D-229ENST00000638939 NUP93Q8N1F7 819 aa5.82□□□□□ -1.48
PDE4D-229ENST00000638939 ZNF513Q8N8E2 541 aaPredicted RBP5.82□□□□□ -1.48
PDE4D-229ENST00000638939 XXYLT1Q8NBI6 393 aa5.82□□□□□ -1.48
PDE4D-229ENST00000638939 GLIS3Q8NEA6 775 aa5.82□□□□□ -1.48
PDE4D-229ENST00000638939 DEFB124Q8NES8 71 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms