RNA–Protein interactions for RNA: ENST00000638120.1

CACNA1D-228, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 2 BASIC

Gene CACNA1D, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-228ENST00000638120 HIPK3Q9H422 1215 aa12.75□□□□□ -0.37
CACNA1D-228ENST00000638120 NRDE2Q9H7Z3 1164 aa12.75□□□□□ -0.37
CACNA1D-228ENST00000638120 MTMR10Q9NXD2 777 aa12.75□□□□□ -0.37
CACNA1D-228ENST00000638120 GOLGA6AQ9NYA3 693 aa12.75□□□□□ -0.37
CACNA1D-228ENST00000638120 ADAM21Q9UKJ8 722 aa12.75□□□□□ -0.37
CACNA1D-228ENST00000638120 LRFN2Q9ULH4 789 aa12.75□□□□□ -0.37
CACNA1D-228ENST00000638120 FZD10Q9ULW2 581 aa12.75□□□□□ -0.37
CACNA1D-228ENST00000638120 NAALADL1Q9UQQ1 740 aa12.75□□□□□ -0.37
CACNA1D-228ENST00000638120 TTC3P53804 2025 aa12.75□□□□□ -0.37
CACNA1D-228ENST00000638120 M0QYT0 321 aa12.74□□□□□ -0.37
CACNA1D-228ENST00000638120 NDC80O14777 642 aa12.74□□□□□ -0.37
CACNA1D-228ENST00000638120 CAPN9O14815 690 aa12.74□□□□□ -0.37
CACNA1D-228ENST00000638120 SYN3O14994 580 aa12.74□□□□□ -0.37
CACNA1D-228ENST00000638120 HOXA2O43364 376 aa12.74□□□□□ -0.37
CACNA1D-228ENST00000638120 IFNB1P01574 187 aa12.74□□□□□ -0.37
CACNA1D-228ENST00000638120 CYP2F1P24903 491 aa12.74□□□□□ -0.37
CACNA1D-228ENST00000638120 ROR1Q01973 937 aa12.74□□□□□ -0.37
CACNA1D-228ENST00000638120 GPS1Q13098 491 aa12.74□□□□□ -0.37
CACNA1D-228ENST00000638120 DENND2CQ68D51 928 aa12.74□□□□□ -0.37
CACNA1D-228ENST00000638120 PM20D1Q6GTS8 502 aa12.74□□□□□ -0.37
CACNA1D-228ENST00000638120 SLC39A5Q6ZMH5 540 aa12.74□□□□□ -0.37
CACNA1D-228ENST00000638120 TRMT10CQ7L0Y3 403 aaKnown RBP12.74□□□□□ -0.37
CACNA1D-228ENST00000638120 CCDC25Q86WR0 208 aa12.74□□□□□ -0.37
CACNA1D-228ENST00000638120 NPAS4Q8IUM7 802 aa12.74□□□□□ -0.37
CACNA1D-228ENST00000638120 SPATA2LQ8IUW3 424 aaPredicted RBP12.74□□□□□ -0.37
CACNA1D-228ENST00000638120 CRIPAKQ8N1N5 446 aa12.74□□□□□ -0.37
CACNA1D-228ENST00000638120 PGAP3Q96FM1 320 aaPredicted RBP12.74□□□□□ -0.37
CACNA1D-228ENST00000638120 SCLYQ96I15 445 aa12.74□□□□□ -0.37
CACNA1D-228ENST00000638120 PKNOX2Q96KN3 472 aa12.74□□□□□ -0.37
CACNA1D-228ENST00000638120 FOXP3Q9BZS1 431 aa12.74□□□□□ -0.37
CACNA1D-228ENST00000638120 CRISPLD2Q9H0B8 497 aa12.74□□□□□ -0.37
CACNA1D-228ENST00000638120 ZCWPW1Q9H0M4 648 aa12.74□□□□□ -0.37
CACNA1D-228ENST00000638120 SEMA4AQ9H3S1 761 aa12.74□□□□□ -0.37
CACNA1D-228ENST00000638120 TMBIM4Q9HC24 238 aa12.74□□□□□ -0.37
CACNA1D-228ENST00000638120 RRN3Q9NYV6 651 aa12.74□□□□□ -0.37
CACNA1D-228ENST00000638120 RCOR3Q9P2K3 495 aaPredicted RBP12.74□□□□□ -0.37
CACNA1D-228ENST00000638120 ADAM28Q9UKQ2 775 aa12.74□□□□□ -0.37
CACNA1D-228ENST00000638120 VWA8A3KMH1 1905 aa12.74□□□□□ -0.37
CACNA1D-228ENST00000638120 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.74□□□□□ -0.37
CACNA1D-228ENST00000638120 GOLGA6L10A6NI86 522 aa12.74□□□□□ -0.37
CACNA1D-228ENST00000638120 RIPK2O43353 540 aa12.74□□□□□ -0.37
CACNA1D-228ENST00000638120 TADA2AO75478 443 aa12.74□□□□□ -0.37
CACNA1D-228ENST00000638120 GATMP50440 423 aa12.74□□□□□ -0.37
CACNA1D-228ENST00000638120 BCAR1P56945 870 aa12.74□□□□□ -0.37
CACNA1D-228ENST00000638120 DEUP1Q05D60 604 aa12.74□□□□□ -0.37
CACNA1D-228ENST00000638120 FAAP100Q0VG06 881 aa12.74□□□□□ -0.37
CACNA1D-228ENST00000638120 MORF4L2Q15014 288 aa12.74□□□□□ -0.37
CACNA1D-228ENST00000638120 C1orf228Q6PIY5 440 aa12.74□□□□□ -0.37
CACNA1D-228ENST00000638120 CTU1Q7Z7A3 348 aaKnown RBP12.74□□□□□ -0.37
CACNA1D-228ENST00000638120 UNC45BQ8IWX7 931 aa12.74□□□□□ -0.37
CACNA1D-228ENST00000638120 ZCCHC9Q8N567 271 aaKnown RBP12.74□□□□□ -0.37
CACNA1D-228ENST00000638120 RSAD2Q8WXG1 361 aa12.74□□□□□ -0.37
CACNA1D-228ENST00000638120 TOX2Q96NM4 488 aa12.74□□□□□ -0.37
CACNA1D-228ENST00000638120 CSPG4P5Q96PW8 444 aa12.74□□□□□ -0.37
CACNA1D-228ENST00000638120 SLC9A7Q96T83 725 aa12.74□□□□□ -0.37
CACNA1D-228ENST00000638120 CDC42EP4Q9H3Q1 356 aaKnown RBP12.74□□□□□ -0.37
CACNA1D-228ENST00000638120 C10orf88Q9H8K7 445 aa12.74□□□□□ -0.37
CACNA1D-228ENST00000638120 TPX2Q9ULW0 747 aaKnown RBP12.74□□□□□ -0.37
CACNA1D-228ENST00000638120 SHOC2Q9UQ13 582 aa12.74□□□□□ -0.37
CACNA1D-228ENST00000638120 USP3Q9Y6I4 520 aa12.74□□□□□ -0.37
CACNA1D-228ENST00000638120 MICAL3Q7RTP6 2002 aa12.73□□□□□ -0.37
CACNA1D-228ENST00000638120 DCDC2CA8MYV0 355 aa12.73□□□□□ -0.37
CACNA1D-228ENST00000638120 OR4Q2P0C623 313 aa12.73□□□□□ -0.37
CACNA1D-228ENST00000638120 MYZAPP0CAP1 466 aa12.73□□□□□ -0.37
CACNA1D-228ENST00000638120 NCAM1P13591 858 aa12.73□□□□□ -0.37
CACNA1D-228ENST00000638120 ZFXP17010 805 aaPredicted RBP12.73□□□□□ -0.37
CACNA1D-228ENST00000638120 AIF1P55008 147 aa12.73□□□□□ -0.37
CACNA1D-228ENST00000638120 CCL23P55773 120 aa12.73□□□□□ -0.37
CACNA1D-228ENST00000638120 IFFO1Q0D2I5 559 aa12.73□□□□□ -0.37
CACNA1D-228ENST00000638120 TRIM60Q495X7 471 aa12.73□□□□□ -0.37
CACNA1D-228ENST00000638120 SLC39A12Q504Y0 691 aa12.73□□□□□ -0.37
CACNA1D-228ENST00000638120 RNASEH2BQ5TBB1 312 aaKnown RBP12.73□□□□□ -0.37
CACNA1D-228ENST00000638120 C1orf53Q5VUE5 145 aa12.73□□□□□ -0.37
CACNA1D-228ENST00000638120 CEP128Q6ZU80 1094 aa12.73□□□□□ -0.37
CACNA1D-228ENST00000638120 ZC3H18Q86VM9 953 aaKnown RBP12.73□□□□□ -0.37
CACNA1D-228ENST00000638120 RELL1Q8IUW5 271 aa12.73□□□□□ -0.37
CACNA1D-228ENST00000638120 DCP1BQ8IZD4 617 aaKnown RBP12.73□□□□□ -0.37
CACNA1D-228ENST00000638120 FAM76AQ8TAV0 307 aa12.73□□□□□ -0.37
CACNA1D-228ENST00000638120 SLC7A14Q8TBB6 771 aa12.73□□□□□ -0.37
CACNA1D-228ENST00000638120 EXOC4Q96A65 974 aa12.73□□□□□ -0.37
CACNA1D-228ENST00000638120 ATP6V1G3Q96LB4 118 aa12.73□□□□□ -0.37
CACNA1D-228ENST00000638120 MRPL9Q9BYD2 267 aaKnown RBP12.73□□□□□ -0.37
CACNA1D-228ENST00000638120 PIGVQ9NUD9 493 aa12.73□□□□□ -0.37
CACNA1D-228ENST00000638120 MARCH5Q9NX47 278 aa12.73□□□□□ -0.37
CACNA1D-228ENST00000638120 WBP1LQ9NX94 342 aa12.73□□□□□ -0.37
CACNA1D-228ENST00000638120 FNDC1Q4ZHG4 1894 aaPredicted RBP12.72□□□□□ -0.37
CACNA1D-228ENST00000638120 SYNJ2BP-COX16A0A087WUM0 186 aa12.72□□□□□ -0.37
CACNA1D-228ENST00000638120 HMGB1P1B2RPK0 211 aaPredicted RBP12.72□□□□□ -0.37
CACNA1D-228ENST00000638120 SHBGP04278 402 aa12.72□□□□□ -0.37
CACNA1D-228ENST00000638120 STIP1P31948 543 aaKnown RBP12.72□□□□□ -0.37
CACNA1D-228ENST00000638120 ARL4AP40617 200 aa12.72□□□□□ -0.37
CACNA1D-228ENST00000638120 TLE2Q04725 743 aa12.72□□□□□ -0.37
CACNA1D-228ENST00000638120 NME3Q13232 169 aa12.72□□□□□ -0.37
CACNA1D-228ENST00000638120 SLC29A2Q14542 456 aa12.72□□□□□ -0.37
CACNA1D-228ENST00000638120 VARS2Q5ST30 1063 aaKnown RBP12.72□□□□□ -0.37
CACNA1D-228ENST00000638120 UBAP2Q5T6F2 1119 aaKnown RBP12.72□□□□□ -0.37
CACNA1D-228ENST00000638120 DARS2Q6PI48 645 aaKnown RBP12.72□□□□□ -0.37
CACNA1D-228ENST00000638120 BEND5Q7L4P6 421 aa12.72□□□□□ -0.37
CACNA1D-228ENST00000638120 PCGF5Q86SE9 256 aa12.72□□□□□ -0.37
CACNA1D-228ENST00000638120 PYROXD2Q8N2H3 581 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms