RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 NHEJ1Q9H9Q4 299 aaPredicted RBP7.06□□□□□ -1.28
UPF3B-205ENST00000636792 MRPL47Q9HD33 250 aaKnown RBP7.06□□□□□ -1.28
UPF3B-205ENST00000636792 ASAH2Q9NR71 780 aa7.06□□□□□ -1.28
UPF3B-205ENST00000636792 TLR8Q9NR97 1041 aaKnown RBP7.06□□□□□ -1.28
UPF3B-205ENST00000636792 MTMR10Q9NXD2 777 aa7.06□□□□□ -1.28
UPF3B-205ENST00000636792 NAGPAQ9UK23 515 aa7.06□□□□□ -1.28
UPF3B-205ENST00000636792 SCML2Q9UQR0 700 aa7.06□□□□□ -1.28
UPF3B-205ENST00000636792 FAM50BQ9Y247 325 aa7.06□□□□□ -1.28
UPF3B-205ENST00000636792 ZFP37Q9Y6Q3 630 aaPredicted RBP7.06□□□□□ -1.28
UPF3B-205ENST00000636792 MYO7AQ13402 2215 aa7.06□□□□□ -1.28
UPF3B-205ENST00000636792 A0A0A6YYK5 440 aaPredicted RBP7.05□□□□□ -1.28
UPF3B-205ENST00000636792 SLC38A8A6NNN8 435 aa7.05□□□□□ -1.28
UPF3B-205ENST00000636792 BTNL10A8MVZ5 291 aa7.05□□□□□ -1.28
UPF3B-205ENST00000636792 CLDN5O00501 218 aa7.05□□□□□ -1.28
UPF3B-205ENST00000636792 DDX3XO00571 662 aaKnown RBP eCLIP7.05□□□□□ -1.28
UPF3B-205ENST00000636792 CCP110O43303 1012 aa7.05□□□□□ -1.28
UPF3B-205ENST00000636792 HCRTO43612 131 aa7.05□□□□□ -1.28
UPF3B-205ENST00000636792 HSF2BPO75031 334 aa7.05□□□□□ -1.28
UPF3B-205ENST00000636792 NDUFA10O95299 355 aa7.05□□□□□ -1.28
UPF3B-205ENST00000636792 SEC24AO95486 1093 aa7.05□□□□□ -1.28
UPF3B-205ENST00000636792 GLP2RO95838 553 aa7.05□□□□□ -1.28
UPF3B-205ENST00000636792 ZBED1O96006 694 aa7.05□□□□□ -1.28
UPF3B-205ENST00000636792 PTMAP06454 111 aaKnown RBP7.05□□□□□ -1.28
UPF3B-205ENST00000636792 FURINP09958 794 aa7.05□□□□□ -1.28
UPF3B-205ENST00000636792 TMEM253P0C7T8 217 aa7.05□□□□□ -1.28
UPF3B-205ENST00000636792 PTPN2P17706 415 aa7.05□□□□□ -1.28
UPF3B-205ENST00000636792 CHRNB2P17787 502 aa7.05□□□□□ -1.28
UPF3B-205ENST00000636792 YWHAQP27348 245 aa7.05□□□□□ -1.28
UPF3B-205ENST00000636792 MTHFRP42898 656 aa7.05□□□□□ -1.28
UPF3B-205ENST00000636792 HADHBP55084 474 aaKnown RBP7.05□□□□□ -1.28
UPF3B-205ENST00000636792 MAP3K7CLP57077 242 aa7.05□□□□□ -1.28
UPF3B-205ENST00000636792 TWF1Q12792 350 aa7.05□□□□□ -1.28
UPF3B-205ENST00000636792 ORC1Q13415 861 aa7.05□□□□□ -1.28
UPF3B-205ENST00000636792 ADGRE1Q14246 886 aa7.05□□□□□ -1.28
UPF3B-205ENST00000636792 TCEAL1Q15170 157 aa7.05□□□□□ -1.28
UPF3B-205ENST00000636792 SPA17Q15506 151 aa7.05□□□□□ -1.28
UPF3B-205ENST00000636792 TAF12Q16514 161 aa7.05□□□□□ -1.28
UPF3B-205ENST00000636792 PTPN20Q4JDL3 420 aa7.05□□□□□ -1.28
UPF3B-205ENST00000636792 NAA35Q5VZE5 725 aa7.05□□□□□ -1.28
UPF3B-205ENST00000636792 CES5AQ6NT32 575 aa7.05□□□□□ -1.28
UPF3B-205ENST00000636792 ANKRD54Q6NXT1 300 aa7.05□□□□□ -1.28
UPF3B-205ENST00000636792 ADGRD2Q7Z7M1 963 aa7.05□□□□□ -1.28
UPF3B-205ENST00000636792 GPR149Q86SP6 731 aa7.05□□□□□ -1.28
UPF3B-205ENST00000636792 MON1AQ86VX9 555 aa7.05□□□□□ -1.28
UPF3B-205ENST00000636792 ERICH1Q86X53 443 aa7.05□□□□□ -1.28
UPF3B-205ENST00000636792 PALB2Q86YC2 1186 aa7.05□□□□□ -1.28
UPF3B-205ENST00000636792 TMEM139Q8IV31 216 aa7.05□□□□□ -1.28
UPF3B-205ENST00000636792 SCN4BQ8IWT1 228 aa7.05□□□□□ -1.28
UPF3B-205ENST00000636792 TTC9BQ8N6N2 239 aa7.05□□□□□ -1.28
UPF3B-205ENST00000636792 SPC24Q8NBT2 197 aa7.05□□□□□ -1.28
UPF3B-205ENST00000636792 SMRP1Q8NCR6 262 aa7.05□□□□□ -1.28
UPF3B-205ENST00000636792 OLIG1Q8TAK6 271 aa7.05□□□□□ -1.28
UPF3B-205ENST00000636792 FNIP1Q8TF40 1166 aa7.05□□□□□ -1.28
UPF3B-205ENST00000636792 SLC20A1Q8WUM9 679 aa7.05□□□□□ -1.28
UPF3B-205ENST00000636792 CTNNBL1Q8WYA6 563 aaPredicted RBP7.05□□□□□ -1.28
UPF3B-205ENST00000636792 PPP1R13BQ96KQ4 1090 aa7.05□□□□□ -1.28
UPF3B-205ENST00000636792 ZNF512Q96ME7 567 aaPredicted RBP7.05□□□□□ -1.28
UPF3B-205ENST00000636792 CDX2Q99626 313 aaPredicted RBP7.05□□□□□ -1.28
UPF3B-205ENST00000636792 OCSTAMPQ9BR26 566 aa7.05□□□□□ -1.28
UPF3B-205ENST00000636792 TSGA10Q9BZW7 698 aa7.05□□□□□ -1.28
UPF3B-205ENST00000636792 SYNCQ9H7C4 482 aa7.05□□□□□ -1.28
UPF3B-205ENST00000636792 ABCC13Q9NSE7 274 aa7.05□□□□□ -1.28
UPF3B-205ENST00000636792 SEPT11Q9NVA2 429 aaKnown RBP7.05□□□□□ -1.28
UPF3B-205ENST00000636792 UVRAGQ9P2Y5 699 aa7.05□□□□□ -1.28
UPF3B-205ENST00000636792 ADAMTS1Q9UHI8 967 aa7.05□□□□□ -1.28
UPF3B-205ENST00000636792 PAXBP1Q9Y5B6 917 aa7.05□□□□□ -1.28
UPF3B-205ENST00000636792 NOTCH4Q99466 2003 aa7.05□□□□□ -1.28
UPF3B-205ENST00000636792 DOCK8Q8NF50 2099 aa7.04□□□□□ -1.28
UPF3B-205ENST00000636792 A0A087X0T9 212 aa7.04□□□□□ -1.28
UPF3B-205ENST00000636792 CCDC195A0A1B0GUA6 201 aa7.04□□□□□ -1.28
UPF3B-205ENST00000636792 KRBA1A5PL33 1030 aa7.04□□□□□ -1.28
UPF3B-205ENST00000636792 GOLGA6L9A6NEM1 432 aa7.04□□□□□ -1.28
UPF3B-205ENST00000636792 E5RJQ4 531 aa7.04□□□□□ -1.28
UPF3B-205ENST00000636792 MEN1O00255 615 aa7.04□□□□□ -1.28
UPF3B-205ENST00000636792 DAB1O75553 588 aa7.04□□□□□ -1.28
UPF3B-205ENST00000636792 BEST1O76090 585 aa7.04□□□□□ -1.28
UPF3B-205ENST00000636792 MTA2O94776 668 aa7.04□□□□□ -1.28
UPF3B-205ENST00000636792 OLFM2O95897 454 aa7.04□□□□□ -1.28
UPF3B-205ENST00000636792 LTFP02788 710 aa7.04□□□□□ -1.28
UPF3B-205ENST00000636792 H2AFZP0C0S5 128 aa7.04□□□□□ -1.28
UPF3B-205ENST00000636792 CCDC175P0C221 793 aa7.04□□□□□ -1.28
UPF3B-205ENST00000636792 ZDHHC11BP0C7U3 371 aa7.04□□□□□ -1.28
UPF3B-205ENST00000636792 FAM228BP0C875 321 aa7.04□□□□□ -1.28
UPF3B-205ENST00000636792 TCF3P15923 654 aa7.04□□□□□ -1.28
UPF3B-205ENST00000636792 EPCAMP16422 314 aa7.04□□□□□ -1.28
UPF3B-205ENST00000636792 HMGA1P17096 107 aaKnown RBP7.04□□□□□ -1.28
UPF3B-205ENST00000636792 IGFBP4P22692 258 aa7.04□□□□□ -1.28
UPF3B-205ENST00000636792 EIF4A3P38919 411 aaKnown RBP7.04□□□□□ -1.28
UPF3B-205ENST00000636792 TKTL1P51854 596 aa7.04□□□□□ -1.28
UPF3B-205ENST00000636792 KPNA1P52294 538 aaPredicted RBP7.04□□□□□ -1.28
UPF3B-205ENST00000636792 DAOAP59103 153 aa7.04□□□□□ -1.28
UPF3B-205ENST00000636792 MRPS5P82675 430 aaKnown RBP7.04□□□□□ -1.28
UPF3B-205ENST00000636792 ADIGQ0VDE8 80 aa7.04□□□□□ -1.28
UPF3B-205ENST00000636792 PTP4A2Q12974 167 aa7.04□□□□□ -1.28
UPF3B-205ENST00000636792 ACAP1Q15027 740 aa7.04□□□□□ -1.28
UPF3B-205ENST00000636792 PTPN21Q16825 1174 aa7.04□□□□□ -1.28
UPF3B-205ENST00000636792 DDR2Q16832 855 aa7.04□□□□□ -1.28
UPF3B-205ENST00000636792 ARHGAP15Q53QZ3 475 aa7.04□□□□□ -1.28
UPF3B-205ENST00000636792 CYP4A22Q5TCH4 519 aa7.04□□□□□ -1.28
UPF3B-205ENST00000636792 TAF3Q5VWG9 929 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms