RNA–Protein interactions for RNA: ENST00000636466.1

GABRB3-219, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-219ENST00000636466 ERMARDQ5T6L9 678 aa14.65□□□□□ -0.06
GABRB3-219ENST00000636466 TMEM139Q8IV31 216 aa14.65□□□□□ -0.06
GABRB3-219ENST00000636466 SEMA4DQ92854 862 aa14.65□□□□□ -0.06
GABRB3-219ENST00000636466 COG4Q9H9E3 785 aa14.65□□□□□ -0.06
GABRB3-219ENST00000636466 COL20A1Q9P218 1284 aa14.65□□□□□ -0.06
GABRB3-219ENST00000636466 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.65□□□□□ -0.06
GABRB3-219ENST00000636466 TMEM247A6NEH6 219 aa14.65□□□□□ -0.06
GABRB3-219ENST00000636466 PRPF4O43172 522 aaKnown RBP eCLIP14.65□□□□□ -0.06
GABRB3-219ENST00000636466 PSMD3O43242 534 aa14.65□□□□□ -0.06
GABRB3-219ENST00000636466 INPP1P49441 399 aa14.65□□□□□ -0.06
GABRB3-219ENST00000636466 ZNF177Q13360 481 aaPredicted RBP14.65□□□□□ -0.06
GABRB3-219ENST00000636466 ITGA9Q13797 1035 aa14.65□□□□□ -0.06
GABRB3-219ENST00000636466 MAPRE2Q15555 327 aa14.65□□□□□ -0.06
GABRB3-219ENST00000636466 BTNL9Q6UXG8 535 aa14.65□□□□□ -0.06
GABRB3-219ENST00000636466 SHC3Q92529 594 aa14.65□□□□□ -0.06
GABRB3-219ENST00000636466 TUBGCP3Q96CW5 907 aa14.65□□□□□ -0.06
GABRB3-219ENST00000636466 KCNK16Q96T55 309 aa14.65□□□□□ -0.06
GABRB3-219ENST00000636466 CINPQ9BW66 212 aaPredicted RBP14.65□□□□□ -0.06
GABRB3-219ENST00000636466 ENO4A6NNW6 628 aa14.65□□□□□ -0.06
GABRB3-219ENST00000636466 AP3B1O00203 1094 aa14.65□□□□□ -0.06
GABRB3-219ENST00000636466 KLHL2O95198 593 aa14.65□□□□□ -0.06
GABRB3-219ENST00000636466 USP17L7P0C7H9 530 aa14.65□□□□□ -0.06
GABRB3-219ENST00000636466 MGAT1P26572 445 aa14.65□□□□□ -0.06
GABRB3-219ENST00000636466 OAZ1P54368 228 aa14.65□□□□□ -0.06
GABRB3-219ENST00000636466 MED21Q13503 144 aa14.65□□□□□ -0.06
GABRB3-219ENST00000636466 ARHGEF7Q14155 803 aa14.65□□□□□ -0.06
GABRB3-219ENST00000636466 RCN1Q15293 331 aa14.65□□□□□ -0.06
GABRB3-219ENST00000636466 PHF21BQ96EK2 531 aa14.65□□□□□ -0.06
GABRB3-219ENST00000636466 CRLS1Q9UJA2 301 aa14.65□□□□□ -0.06
GABRB3-219ENST00000636466 ITGA11Q9UKX5 1188 aa14.65□□□□□ -0.06
GABRB3-219ENST00000636466 PYGLP06737 847 aa14.64□□□□□ -0.07
GABRB3-219ENST00000636466 MMRN1Q13201 1228 aa14.64□□□□□ -0.07
GABRB3-219ENST00000636466 ZNF268Q14587 947 aaPredicted RBP14.64□□□□□ -0.07
GABRB3-219ENST00000636466 ILDR2Q71H61 639 aa14.64□□□□□ -0.07
GABRB3-219ENST00000636466 PALB2Q86YC2 1186 aa14.64□□□□□ -0.07
GABRB3-219ENST00000636466 FAM71AQ8IYT1 594 aa14.64□□□□□ -0.07
GABRB3-219ENST00000636466 FRMD8Q9BZ67 464 aaPredicted RBP14.64□□□□□ -0.07
GABRB3-219ENST00000636466 ARMCX1Q9P291 453 aa14.64□□□□□ -0.07
GABRB3-219ENST00000636466 WDR27A2RRH5 827 aa14.64□□□□□ -0.07
GABRB3-219ENST00000636466 ERI2A8K979 691 aaKnown RBP14.64□□□□□ -0.07
GABRB3-219ENST00000636466 ADRA1DP25100 572 aa14.64□□□□□ -0.07
GABRB3-219ENST00000636466 MAMLD1Q13495 774 aa14.64□□□□□ -0.07
GABRB3-219ENST00000636466 TTMPQ5BVD1 217 aa14.64□□□□□ -0.07
GABRB3-219ENST00000636466 ELMSAN1Q6PJG2 1045 aa14.64□□□□□ -0.07
GABRB3-219ENST00000636466 ATP6V0D2Q8N8Y2 350 aa14.64□□□□□ -0.07
GABRB3-219ENST00000636466 DNAJC9Q8WXX5 260 aa14.64□□□□□ -0.07
GABRB3-219ENST00000636466 CDT1Q9H211 546 aa14.64□□□□□ -0.07
GABRB3-219ENST00000636466 STX18Q9P2W9 335 aaKnown RBP14.64□□□□□ -0.07
GABRB3-219ENST00000636466 ARHGAP26Q9UNA1 814 aa14.64□□□□□ -0.07
GABRB3-219ENST00000636466 C3P01024 1663 aa14.64□□□□□ -0.07
GABRB3-219ENST00000636466 ASS1P00966 412 aaKnown RBP14.64□□□□□ -0.07
GABRB3-219ENST00000636466 MAP4P27816 1152 aaKnown RBP14.64□□□□□ -0.07
GABRB3-219ENST00000636466 SERPINB4P48594 390 aa14.64□□□□□ -0.07
GABRB3-219ENST00000636466 PLK1P53350 603 aa14.64□□□□□ -0.07
GABRB3-219ENST00000636466 ST8SIA6P61647 398 aa14.64□□□□□ -0.07
GABRB3-219ENST00000636466 FAAP100Q0VG06 881 aa14.64□□□□□ -0.07
GABRB3-219ENST00000636466 RNF148Q8N7C7 305 aa14.64□□□□□ -0.07
GABRB3-219ENST00000636466 POU5F2Q8N7G0 328 aa14.64□□□□□ -0.07
GABRB3-219ENST00000636466 DDX50Q9BQ39 737 aaKnown RBP14.64□□□□□ -0.07
GABRB3-219ENST00000636466 ASPSCR1Q9BZE9 553 aa14.64□□□□□ -0.07
GABRB3-219ENST00000636466 ULBP1Q9BZM6 244 aa14.64□□□□□ -0.07
GABRB3-219ENST00000636466 ADNPQ9H2P0 1102 aa14.64□□□□□ -0.07
GABRB3-219ENST00000636466 RALBP11234 206 aa14.64□□□□□ -0.07
GABRB3-219ENST00000636466 COPAP53621 1224 aa14.64□□□□□ -0.07
GABRB3-219ENST00000636466 HIRAP54198 1017 aaPredicted RBP14.64□□□□□ -0.07
GABRB3-219ENST00000636466 PTK6Q13882 451 aa14.64□□□□□ -0.07
GABRB3-219ENST00000636466 MFSD10Q14728 455 aa14.64□□□□□ -0.07
GABRB3-219ENST00000636466 C3orf20Q8ND61 904 aa14.64□□□□□ -0.07
GABRB3-219ENST00000636466 MAGEB18Q96M61 343 aa14.64□□□□□ -0.07
GABRB3-219ENST00000636466 TMEM237Q96Q45 408 aa14.64□□□□□ -0.07
GABRB3-219ENST00000636466 STARD7Q9NQZ5 370 aa14.64□□□□□ -0.07
GABRB3-219ENST00000636466 GDF3Q9NR23 364 aa14.64□□□□□ -0.07
GABRB3-219ENST00000636466 SHOC2Q9UQ13 582 aa14.64□□□□□ -0.07
GABRB3-219ENST00000636466 PPP2R3BQ9Y5P8 575 aa14.64□□□□□ -0.07
GABRB3-219ENST00000636466 STRNO43815 780 aa14.63□□□□□ -0.07
GABRB3-219ENST00000636466 GLRA3O75311 464 aa14.63□□□□□ -0.07
GABRB3-219ENST00000636466 STMN1P16949 149 aa14.63□□□□□ -0.07
GABRB3-219ENST00000636466 CCR1P32246 355 aa14.63□□□□□ -0.07
GABRB3-219ENST00000636466 FUT11Q495W5 492 aa14.63□□□□□ -0.07
GABRB3-219ENST00000636466 WSCD1Q658N2 575 aa14.63□□□□□ -0.07
GABRB3-219ENST00000636466 C16orf46Q6P387 395 aa14.63□□□□□ -0.07
GABRB3-219ENST00000636466 INPP5DQ92835 1189 aa14.63□□□□□ -0.07
GABRB3-219ENST00000636466 KLRG1Q96E93 195 aa14.63□□□□□ -0.07
GABRB3-219ENST00000636466 F5H5T6 163 aa14.63□□□□□ -0.07
GABRB3-219ENST00000636466 RNF103O00237 685 aa14.63□□□□□ -0.07
GABRB3-219ENST00000636466 MYO1DO94832 1006 aa14.63□□□□□ -0.07
GABRB3-219ENST00000636466 ATP6V1B1P15313 513 aa14.63□□□□□ -0.07
GABRB3-219ENST00000636466 PBX1P40424 430 aa14.63□□□□□ -0.07
GABRB3-219ENST00000636466 SLC11A2P49281 568 aa14.63□□□□□ -0.07
GABRB3-219ENST00000636466 SH3BGRP55822 239 aaPredicted RBP14.63□□□□□ -0.07
GABRB3-219ENST00000636466 POU4F1Q01851 419 aa14.63□□□□□ -0.07
GABRB3-219ENST00000636466 ZACNQ401N2 412 aa14.63□□□□□ -0.07
GABRB3-219ENST00000636466 SYTL3Q4VX76 610 aa14.63□□□□□ -0.07
GABRB3-219ENST00000636466 LINC00523Q86TU6 105 aa14.63□□□□□ -0.07
GABRB3-219ENST00000636466 MRPL40Q9NQ50 206 aaKnown RBP14.63□□□□□ -0.07
GABRB3-219ENST00000636466 VANGL2Q9ULK5 521 aa14.63□□□□□ -0.07
GABRB3-219ENST00000636466 SNX5Q9Y5X3 404 aa14.63□□□□□ -0.07
GABRB3-219ENST00000636466 GON4LQ3T8J9 2241 aa14.63□□□□□ -0.07
GABRB3-219ENST00000636466 PQBP1O60828 265 aaKnown RBP14.63□□□□□ -0.07
GABRB3-219ENST00000636466 VAPBO95292 243 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms