RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 PPP1R13LQ8WUF5 828 aa7.46□□□□□ -1.22
BRCA1-230ENST00000634433 TRIB2Q92519 343 aa7.46□□□□□ -1.22
BRCA1-230ENST00000634433 PPP1R10Q96QC0 940 aaKnown RBP7.46□□□□□ -1.22
BRCA1-230ENST00000634433 DEPDC7Q96QD5 511 aa7.46□□□□□ -1.22
BRCA1-230ENST00000634433 SEMA4AQ9H3S1 761 aa7.46□□□□□ -1.22
BRCA1-230ENST00000634433 PCDH9Q9HC56 1237 aa7.46□□□□□ -1.22
BRCA1-230ENST00000634433 XPNPEP3Q9NQH7 507 aa7.46□□□□□ -1.22
BRCA1-230ENST00000634433 FAM49BQ9NUQ9 324 aa7.46□□□□□ -1.22
BRCA1-230ENST00000634433 MKS1Q9NXB0 559 aa7.46□□□□□ -1.22
BRCA1-230ENST00000634433 PCSK1NQ9UHG2 260 aa7.46□□□□□ -1.22
BRCA1-230ENST00000634433 PRKAB1Q9Y478 270 aa7.46□□□□□ -1.22
BRCA1-230ENST00000634433 MYADML2A6NDP7 307 aa7.45□□□□□ -1.22
BRCA1-230ENST00000634433 ZNF487B1APH4 448 aa7.45□□□□□ -1.22
BRCA1-230ENST00000634433 APOC4-APOC2K7ER74 178 aa7.45□□□□□ -1.22
BRCA1-230ENST00000634433 CYB561D2O14569 222 aa7.45□□□□□ -1.22
BRCA1-230ENST00000634433 DNALI1O14645 258 aaPredicted RBP7.45□□□□□ -1.22
BRCA1-230ENST00000634433 MCF2LO15068 1137 aa7.45□□□□□ -1.22
BRCA1-230ENST00000634433 PGK1P00558 417 aa7.45□□□□□ -1.22
BRCA1-230ENST00000634433 AGTP01019 485 aa7.45□□□□□ -1.22
BRCA1-230ENST00000634433 APOC2P02655 101 aa7.45□□□□□ -1.22
BRCA1-230ENST00000634433 THP07101 528 aa7.45□□□□□ -1.22
BRCA1-230ENST00000634433 IL1R2P27930 398 aa7.45□□□□□ -1.22
BRCA1-230ENST00000634433 MZF1P28698 734 aaPredicted RBP7.45□□□□□ -1.22
BRCA1-230ENST00000634433 CTGFP29279 349 aa7.45□□□□□ -1.22
BRCA1-230ENST00000634433 RPL9P32969 192 aaKnown RBP7.45□□□□□ -1.22
BRCA1-230ENST00000634433 PTPN9P43378 593 aa7.45□□□□□ -1.22
BRCA1-230ENST00000634433 LHX1P48742 406 aa7.45□□□□□ -1.22
BRCA1-230ENST00000634433 RPL34P49207 117 aaKnown RBP7.45□□□□□ -1.22
BRCA1-230ENST00000634433 PPP2R2AP63151 447 aa7.45□□□□□ -1.22
BRCA1-230ENST00000634433 GNGT1P63211 74 aa7.45□□□□□ -1.22
BRCA1-230ENST00000634433 KRT81Q14533 505 aa7.45□□□□□ -1.22
BRCA1-230ENST00000634433 MORF4L2Q15014 288 aa7.45□□□□□ -1.22
BRCA1-230ENST00000634433 TRIP13Q15645 432 aaPredicted RBP7.45□□□□□ -1.22
BRCA1-230ENST00000634433 OASLQ15646 514 aaKnown RBP7.45□□□□□ -1.22
BRCA1-230ENST00000634433 ZCCHC9Q8N567 271 aaKnown RBP7.45□□□□□ -1.22
BRCA1-230ENST00000634433 SH2D3CQ8N5H7 860 aa7.45□□□□□ -1.22
BRCA1-230ENST00000634433 SLC35B2Q8TB61 432 aa7.45□□□□□ -1.22
BRCA1-230ENST00000634433 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.45□□□□□ -1.22
BRCA1-230ENST00000634433 SNRNP27Q8WVK2 155 aaKnown RBP7.45□□□□□ -1.22
BRCA1-230ENST00000634433 KBTBD7Q8WVZ9 684 aa7.45□□□□□ -1.22
BRCA1-230ENST00000634433 RSAD2Q8WXG1 361 aa7.45□□□□□ -1.22
BRCA1-230ENST00000634433 HSPH1Q92598 858 aa7.45□□□□□ -1.22
BRCA1-230ENST00000634433 MPP4Q96JB8 637 aa7.45□□□□□ -1.22
BRCA1-230ENST00000634433 TTC25Q96NG3 672 aa7.45□□□□□ -1.22
BRCA1-230ENST00000634433 SENP6Q9GZR1 1112 aaPredicted RBP7.45□□□□□ -1.22
BRCA1-230ENST00000634433 CXCL16Q9H2A7 254 aa7.45□□□□□ -1.22
BRCA1-230ENST00000634433 UBN1Q9NPG3 1134 aa7.45□□□□□ -1.22
BRCA1-230ENST00000634433 FAM105AQ9NUU6 356 aa7.45□□□□□ -1.22
BRCA1-230ENST00000634433 GABRQQ9UN88 632 aa7.45□□□□□ -1.22
BRCA1-230ENST00000634433 PRRT4C9JH25 899 aa7.45□□□□□ -1.22
BRCA1-230ENST00000634433 SGK1O00141 431 aa7.45□□□□□ -1.22
BRCA1-230ENST00000634433 RASGRF2O14827 1237 aa7.45□□□□□ -1.22
BRCA1-230ENST00000634433 XPO1O14980 1071 aaKnown RBP7.45□□□□□ -1.22
BRCA1-230ENST00000634433 TCEA3O75764 348 aa7.45□□□□□ -1.22
BRCA1-230ENST00000634433 ENDOD1O94919 500 aa7.45□□□□□ -1.22
BRCA1-230ENST00000634433 TTC4O95801 387 aa7.45□□□□□ -1.22
BRCA1-230ENST00000634433 ZFXP17010 805 aaPredicted RBP7.45□□□□□ -1.22
BRCA1-230ENST00000634433 VARSP26640 1264 aaKnown RBP7.45□□□□□ -1.22
BRCA1-230ENST00000634433 CST5P28325 142 aaPredicted RBP7.45□□□□□ -1.22
BRCA1-230ENST00000634433 STIP1P31948 543 aaKnown RBP7.45□□□□□ -1.22
BRCA1-230ENST00000634433 ARSEP51690 589 aa7.45□□□□□ -1.22
BRCA1-230ENST00000634433 CDH6P55285 790 aa7.45□□□□□ -1.22
BRCA1-230ENST00000634433 CACNB2Q08289 660 aaPredicted RBP7.45□□□□□ -1.22
BRCA1-230ENST00000634433 SMTNL2Q2TAL5 461 aa7.45□□□□□ -1.22
BRCA1-230ENST00000634433 CCDC14Q49A88 953 aa7.45□□□□□ -1.22
BRCA1-230ENST00000634433 KCNT1Q5JUK3 1230 aa7.45□□□□□ -1.22
BRCA1-230ENST00000634433 HIBCHQ6NVY1 386 aaPredicted RBP7.45□□□□□ -1.22
BRCA1-230ENST00000634433 SLC26A9Q7LBE3 791 aa7.45□□□□□ -1.22
BRCA1-230ENST00000634433 ANKS1BQ7Z6G8 1248 aa7.45□□□□□ -1.22
BRCA1-230ENST00000634433 MRPL10Q7Z7H8 261 aaKnown RBP7.45□□□□□ -1.22
BRCA1-230ENST00000634433 PLPP7Q8NBV4 271 aa7.45□□□□□ -1.22
BRCA1-230ENST00000634433 KLHDC9Q8NEP7 349 aa7.45□□□□□ -1.22
BRCA1-230ENST00000634433 SPATA18Q8TC71 538 aa7.45□□□□□ -1.22
BRCA1-230ENST00000634433 TLCD1Q96CP7 247 aa7.45□□□□□ -1.22
BRCA1-230ENST00000634433 PGBD4Q96DM1 585 aa7.45□□□□□ -1.22
BRCA1-230ENST00000634433 SERPINB12Q96P63 405 aa7.45□□□□□ -1.22
BRCA1-230ENST00000634433 HNRNPABQ99729 332 aaKnown RBP7.45□□□□□ -1.22
BRCA1-230ENST00000634433 CALN1Q9BXU9 219 aa7.45□□□□□ -1.22
BRCA1-230ENST00000634433 EPB41L4BQ9H329 900 aa7.45□□□□□ -1.22
BRCA1-230ENST00000634433 FAM50BQ9Y247 325 aa7.45□□□□□ -1.22
BRCA1-230ENST00000634433 TRIP12Q14669 1992 aaPredicted RBP7.45□□□□□ -1.22
BRCA1-230ENST00000634433 ARHGEF37A1IGU5 675 aa7.44□□□□□ -1.22
BRCA1-230ENST00000634433 MDM4O15151 490 aa7.44□□□□□ -1.22
BRCA1-230ENST00000634433 SPTLC1O15269 473 aa7.44□□□□□ -1.22
BRCA1-230ENST00000634433 EIF3HO15372 352 aaKnown RBP eCLIP7.44□□□□□ -1.22
BRCA1-230ENST00000634433 PAPSS1O43252 624 aaPredicted RBP7.44□□□□□ -1.22
BRCA1-230ENST00000634433 ZNF623O75123 536 aa7.44□□□□□ -1.22
BRCA1-230ENST00000634433 FGFR1P11362 822 aa7.44□□□□□ -1.22
BRCA1-230ENST00000634433 ADORA2BP29275 332 aa7.44□□□□□ -1.22
BRCA1-230ENST00000634433 CTHP32929 405 aa7.44□□□□□ -1.22
BRCA1-230ENST00000634433 MDH1P40925 334 aaKnown RBP7.44□□□□□ -1.22
BRCA1-230ENST00000634433 STT3AP46977 705 aa7.44□□□□□ -1.22
BRCA1-230ENST00000634433 VPS41P49754 854 aa7.44□□□□□ -1.22
BRCA1-230ENST00000634433 BPIFB3P59826 476 aa7.44□□□□□ -1.22
BRCA1-230ENST00000634433 MAGOHP61326 146 aaKnown RBP7.44□□□□□ -1.22
BRCA1-230ENST00000634433 OTUD4Q01804 1114 aaKnown RBP7.44□□□□□ -1.22
BRCA1-230ENST00000634433 SP3Q02447 781 aa7.44□□□□□ -1.22
BRCA1-230ENST00000634433 PRKCZQ05513 592 aa7.44□□□□□ -1.22
BRCA1-230ENST00000634433 MGAT3Q09327 533 aa7.44□□□□□ -1.22
BRCA1-230ENST00000634433 GPS1Q13098 491 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms