RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 KLHL17Q6TDP4 642 aa5.1□□□□□ -1.59
SDCBP-213ENST00000630925 THSD4Q6ZMP0 1018 aa5.1□□□□□ -1.59
SDCBP-213ENST00000630925 LINC00696Q6ZRV3 163 aa5.1□□□□□ -1.59
SDCBP-213ENST00000630925 USP49Q70CQ1 688 aa5.1□□□□□ -1.59
SDCBP-213ENST00000630925 TUBA1AQ71U36 451 aa5.1□□□□□ -1.59
SDCBP-213ENST00000630925 PDZD3Q86UT5 571 aa5.1□□□□□ -1.59
SDCBP-213ENST00000630925 RFX6Q8HWS3 928 aa5.1□□□□□ -1.59
SDCBP-213ENST00000630925 ULK2Q8IYT8 1036 aa5.1□□□□□ -1.59
SDCBP-213ENST00000630925 WDTC1Q8N5D0 677 aa5.1□□□□□ -1.59
SDCBP-213ENST00000630925 C7orf57Q8NEG2 295 aa5.1□□□□□ -1.59
SDCBP-213ENST00000630925 SCAMP5Q8TAC9 235 aa5.1□□□□□ -1.59
SDCBP-213ENST00000630925 CCDC110Q8TBZ0 833 aa5.1□□□□□ -1.59
SDCBP-213ENST00000630925 BCAS4Q8TDM0 211 aa5.1□□□□□ -1.59
SDCBP-213ENST00000630925 CSGALNACT1Q8TDX6 532 aa5.1□□□□□ -1.59
SDCBP-213ENST00000630925 SLC22A17Q8WUG5 538 aa5.1□□□□□ -1.59
SDCBP-213ENST00000630925 TNPO1Q92973 898 aaKnown RBP5.1□□□□□ -1.59
SDCBP-213ENST00000630925 SUCLG2Q96I99 432 aa5.1□□□□□ -1.59
SDCBP-213ENST00000630925 TRERF1Q96PN7 1200 aa5.1□□□□□ -1.59
SDCBP-213ENST00000630925 ELF4Q99607 663 aaPredicted RBP5.1□□□□□ -1.59
SDCBP-213ENST00000630925 EDEM2Q9BV94 578 aa5.1□□□□□ -1.59
SDCBP-213ENST00000630925 PRR14Q9BWN1 585 aa5.1□□□□□ -1.59
SDCBP-213ENST00000630925 TRIM2Q9C040 744 aa5.1□□□□□ -1.59
SDCBP-213ENST00000630925 FTOQ9C0B1 505 aaKnown RBP eCLIP5.1□□□□□ -1.595e-6■□□□□ 9.5
SDCBP-213ENST00000630925 NKX2-4Q9H2Z4 354 aa5.1□□□□□ -1.59
SDCBP-213ENST00000630925 STN1Q9H668 368 aaKnown RBP5.1□□□□□ -1.59
SDCBP-213ENST00000630925 ZMAT4Q9H898 229 aa5.1□□□□□ -1.59
SDCBP-213ENST00000630925 SLC35C2Q9NQQ7 365 aa5.1□□□□□ -1.59
SDCBP-213ENST00000630925 NECTIN3Q9NQS3 549 aa5.1□□□□□ -1.59
SDCBP-213ENST00000630925 PRDM8Q9NQV8 689 aa5.1□□□□□ -1.59
SDCBP-213ENST00000630925 IPO11Q9UI26 975 aaKnown RBP5.1□□□□□ -1.59
SDCBP-213ENST00000630925 VAV3Q9UKW4 847 aa5.1□□□□□ -1.59
SDCBP-213ENST00000630925 ZMYND8Q9ULU4 1186 aaPredicted RBP5.1□□□□□ -1.59
SDCBP-213ENST00000630925 ZNF451Q9Y4E5 1061 aa5.1□□□□□ -1.59
SDCBP-213ENST00000630925 GMEB1Q9Y692 573 aa5.1□□□□□ -1.59
SDCBP-213ENST00000630925 TNRQ92752 1358 aa5.1□□□□□ -1.59
SDCBP-213ENST00000630925 PLXNC1O60486 1568 aa5.1□□□□□ -1.59
SDCBP-213ENST00000630925 DCDC2CA8MYV0 355 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 DVL2O14641 736 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 ANGPT2O15123 496 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 BUB1O43683 1085 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 TSPAN1O60635 241 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 HMGCRP04035 888 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 ABCB1P08183 1280 aaPredicted RBP5.09□□□□□ -1.59
SDCBP-213ENST00000630925 ITGA2BP08514 1039 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 VIMP08670 466 aaKnown RBP5.09□□□□□ -1.59
SDCBP-213ENST00000630925 CYP3A4P08684 503 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 KITP10721 976 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 EPHA8P29322 1005 aaPredicted RBP5.09□□□□□ -1.59
SDCBP-213ENST00000630925 SLC7A1P30825 629 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 METAP1P53582 386 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 CDK17Q00537 523 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 PMP22Q01453 160 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 TAP2Q03519 686 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 CLN3Q13286 438 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 GPM6BQ13491 265 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 DHX34Q14147 1143 aaKnown RBP5.09□□□□□ -1.59
SDCBP-213ENST00000630925 BTG3Q14201 252 aaPredicted RBP5.09□□□□□ -1.59
SDCBP-213ENST00000630925 RCN2Q14257 317 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 IQCB1Q15051 598 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 DGKDQ16760 1214 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 MYLK3Q32MK0 819 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 NHSL2Q5HYW2 709 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 PLEKHS1Q5SXH7 462 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 AAGABQ6PD74 315 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 ATF7IPQ6VMQ6 1270 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 FAM83HQ6ZRV2 1179 aaPredicted RBP5.09□□□□□ -1.59
SDCBP-213ENST00000630925 FRMD7Q6ZUT3 714 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 PSTKQ8IV42 348 aaKnown RBP5.09□□□□□ -1.59
SDCBP-213ENST00000630925 LINC00346Q8IVM7 164 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 SYCP3Q8IZU3 236 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 ARHGEF39Q8N4T4 335 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 OXR1Q8N573 874 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 POU5F2Q8N7G0 328 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 BANPQ8N9N5 519 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 GLIS1Q8NBF1 620 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 POGLUT1Q8NBL1 392 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 KREMEN2Q8NCW0 462 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 SLC13A3Q8WWT9 602 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 PRCCQ92733 491 aaPredicted RBP5.09□□□□□ -1.59
SDCBP-213ENST00000630925 SYN2Q92777 582 aaPredicted RBP5.09□□□□□ -1.59
SDCBP-213ENST00000630925 DDX17Q92841 729 aaKnown RBP5.09□□□□□ -1.59
SDCBP-213ENST00000630925 HDAC10Q969S8 669 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 SDCCAG3Q96C92 435 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 INTS12Q96CB8 462 aaKnown RBP5.09□□□□□ -1.59
SDCBP-213ENST00000630925 MRPL38Q96DV4 380 aaKnown RBP5.09□□□□□ -1.59
SDCBP-213ENST00000630925 PIWIL1Q96J94 861 aaKnown RBP5.09□□□□□ -1.59
SDCBP-213ENST00000630925 PTCHD1Q96NR3 888 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 RAB3IPQ96QF0 476 aaPredicted RBP5.09□□□□□ -1.59
SDCBP-213ENST00000630925 WRNIP1Q96S55 665 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 FAM118BQ9BPY3 351 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 SIKE1Q9BRV8 207 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 KLHL4Q9C0H6 718 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 MVB12BQ9H7P6 319 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 ZDHHC7Q9NXF8 308 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 CYP39A1Q9NYL5 469 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 HSF4Q9ULV5 492 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 VPS9D1Q9Y2B5 631 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 OR6C74A6NCV1 312 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 ZSCAN5BA6NJL1 495 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 WDR46O15213 610 aaKnown RBP5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms