RNA–Protein interactions for RNA: ENST00000629136.1

CHD2-217, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-217ENST00000629136 C2orf27AQ580R0 203 aa11.31□□□□□ -0.6
CHD2-217ENST00000629136 LCLAT1Q6UWP7 414 aa11.31□□□□□ -0.6
CHD2-217ENST00000629136 CLEC17AQ6ZS10 378 aa11.31□□□□□ -0.6
CHD2-217ENST00000629136 MIB1Q86YT6 1006 aa11.31□□□□□ -0.6
CHD2-217ENST00000629136 IRF2BP1Q8IU81 584 aa11.31□□□□□ -0.6
CHD2-217ENST00000629136 NAT16Q8N8M0 369 aa11.31□□□□□ -0.6
CHD2-217ENST00000629136 IL17RCQ8NAC3 791 aa11.31□□□□□ -0.6
CHD2-217ENST00000629136 RBBP8NLQ8NC74 664 aaPredicted RBP11.31□□□□□ -0.6
CHD2-217ENST00000629136 UBA3Q8TBC4 463 aa11.31□□□□□ -0.6
CHD2-217ENST00000629136 GAB3Q8WWW8 586 aa11.31□□□□□ -0.6
CHD2-217ENST00000629136 KCTD13Q8WZ19 329 aa11.31□□□□□ -0.6
CHD2-217ENST00000629136 NDRG1Q92597 394 aaKnown RBP11.31□□□□□ -0.6
CHD2-217ENST00000629136 CDK5RAP1Q96SZ6 601 aaKnown RBP11.31□□□□□ -0.6
CHD2-217ENST00000629136 INTS2Q9H0H0 1204 aaKnown RBP11.31□□□□□ -0.6
CHD2-217ENST00000629136 ZDHHC4Q9NPG8 344 aa11.31□□□□□ -0.6
CHD2-217ENST00000629136 MARK1Q9P0L2 795 aa11.31□□□□□ -0.6
CHD2-217ENST00000629136 LSM7Q9UK45 103 aaKnown RBP11.31□□□□□ -0.6
CHD2-217ENST00000629136 MMP17Q9ULZ9 603 aa11.31□□□□□ -0.6
CHD2-217ENST00000629136 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.31□□□□□ -0.6
CHD2-217ENST00000629136 PTPRZ1P23471 2315 aaPredicted RBP11.3□□□□□ -0.6
CHD2-217ENST00000629136 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.3□□□□□ -0.6
CHD2-217ENST00000629136 NEDD8-MDP1E9PL57 170 aa11.3□□□□□ -0.6
CHD2-217ENST00000629136 CACNG3O60359 315 aa11.3□□□□□ -0.6
CHD2-217ENST00000629136 GABBR2O75899 941 aa11.3□□□□□ -0.6
CHD2-217ENST00000629136 FGFR1OPO95684 399 aaKnown RBP11.3□□□□□ -0.6
CHD2-217ENST00000629136 KLKB1P03952 638 aa11.3□□□□□ -0.6
CHD2-217ENST00000629136 RALAP11233 206 aa11.3□□□□□ -0.6
CHD2-217ENST00000629136 HNRNPLP14866 589 aaKnown RBP eCLIP11.3□□□□□ -0.66e-7■□□□□ 10.1
CHD2-217ENST00000629136 GRIA2P42262 883 aa11.3□□□□□ -0.6
CHD2-217ENST00000629136 DAOAP59103 153 aa11.3□□□□□ -0.6
CHD2-217ENST00000629136 MRPS21P82921 87 aaKnown RBP11.3□□□□□ -0.6
CHD2-217ENST00000629136 DPCR1Q3MIW9 517 aa11.3□□□□□ -0.6
CHD2-217ENST00000629136 TMEM92Q6UXU6 159 aa11.3□□□□□ -0.6
CHD2-217ENST00000629136 TPGS1Q6ZTW0 290 aa11.3□□□□□ -0.6
CHD2-217ENST00000629136 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.3□□□□□ -0.6
CHD2-217ENST00000629136 TADA2BQ86TJ2 420 aa11.3□□□□□ -0.6
CHD2-217ENST00000629136 ARHGAP18Q8N392 663 aa11.3□□□□□ -0.6
CHD2-217ENST00000629136 FAM160A2Q8N612 972 aaPredicted RBP11.3□□□□□ -0.6
CHD2-217ENST00000629136 ALLCQ8N6M5 410 aa11.3□□□□□ -0.6
CHD2-217ENST00000629136 TERB1Q8NA31 727 aa11.3□□□□□ -0.6
CHD2-217ENST00000629136 CCDC26Q8TAB7 109 aa11.3□□□□□ -0.6
CHD2-217ENST00000629136 SLC35F5Q8WV83 523 aa11.3□□□□□ -0.6
CHD2-217ENST00000629136 SECISBP2LQ93073 1101 aaKnown RBP11.3□□□□□ -0.6
CHD2-217ENST00000629136 LRRC4Q9HBW1 653 aa11.3□□□□□ -0.6
CHD2-217ENST00000629136 GMEB2Q9UKD1 530 aa11.3□□□□□ -0.6
CHD2-217ENST00000629136 HCN2Q9UL51 889 aa11.3□□□□□ -0.6
CHD2-217ENST00000629136 RAB23Q9ULC3 237 aa11.3□□□□□ -0.6
CHD2-217ENST00000629136 KIAA1257Q9ULG3 409 aa11.3□□□□□ -0.6
CHD2-217ENST00000629136 CNTN6Q9UQ52 1028 aa11.3□□□□□ -0.6
CHD2-217ENST00000629136 YJEFN3A6XGL0 299 aa11.29□□□□□ -0.6
CHD2-217ENST00000629136 E7ENQ6 273 aa11.29□□□□□ -0.6
CHD2-217ENST00000629136 M0QYV0 167 aa11.29□□□□□ -0.6
CHD2-217ENST00000629136 SGK1O00141 431 aa11.29□□□□□ -0.6
CHD2-217ENST00000629136 PIK3R2O00459 728 aa11.29□□□□□ -0.6
CHD2-217ENST00000629136 AXIN1O15169 862 aa11.29□□□□□ -0.6
CHD2-217ENST00000629136 ADAM23O75077 832 aa11.29□□□□□ -0.6
CHD2-217ENST00000629136 RPP40O75818 363 aaKnown RBP11.29□□□□□ -0.6
CHD2-217ENST00000629136 APBB3O95704 486 aa11.29□□□□□ -0.6
CHD2-217ENST00000629136 RETP07949 1114 aa11.29□□□□□ -0.6
CHD2-217ENST00000629136 TYRP14679 529 aa11.29□□□□□ -0.6
CHD2-217ENST00000629136 CORO1AP31146 461 aaKnown RBP11.29□□□□□ -0.6
CHD2-217ENST00000629136 TIE1P35590 1138 aa11.29□□□□□ -0.6
CHD2-217ENST00000629136 ID4P47928 161 aa11.29□□□□□ -0.6
CHD2-217ENST00000629136 RGS7P49802 495 aa11.29□□□□□ -0.6
CHD2-217ENST00000629136 COG7P83436 770 aa11.29□□□□□ -0.6
CHD2-217ENST00000629136 APBA1Q02410 837 aa11.29□□□□□ -0.6
CHD2-217ENST00000629136 SPEM2Q0P670 501 aa11.29□□□□□ -0.6
CHD2-217ENST00000629136 STILQ15468 1287 aa11.29□□□□□ -0.6
CHD2-217ENST00000629136 CNGA2Q16280 664 aa11.29□□□□□ -0.6
CHD2-217ENST00000629136 CRY1Q16526 586 aa11.29□□□□□ -0.6
CHD2-217ENST00000629136 EMC10Q5UCC4 262 aa11.29□□□□□ -0.6
CHD2-217ENST00000629136 BTBD8Q5XKL5 378 aa11.29□□□□□ -0.6
CHD2-217ENST00000629136 PMF1Q6P1K2 205 aa11.29□□□□□ -0.6
CHD2-217ENST00000629136 GJB7Q6PEY0 223 aa11.29□□□□□ -0.6
CHD2-217ENST00000629136 TRIM65Q6PJ69 517 aa11.29□□□□□ -0.6
CHD2-217ENST00000629136 TOGARAM2Q6ZUX3 1019 aa11.29□□□□□ -0.6
CHD2-217ENST00000629136 CEP68Q76N32 757 aa11.29□□□□□ -0.6
CHD2-217ENST00000629136 RASSF3Q86WH2 238 aa11.29□□□□□ -0.6
CHD2-217ENST00000629136 SIX6OS1Q8N1H7 587 aa11.29□□□□□ -0.6
CHD2-217ENST00000629136 SCML4Q8N228 414 aa11.29□□□□□ -0.6
CHD2-217ENST00000629136 CCDC33Q8N5R6 958 aa11.29□□□□□ -0.6
CHD2-217ENST00000629136 MLKLQ8NB16 471 aa11.29□□□□□ -0.6
CHD2-217ENST00000629136 TSTD1Q8NFU3 115 aa11.29□□□□□ -0.6
CHD2-217ENST00000629136 CLEC4CQ8WTT0 213 aa11.29□□□□□ -0.6
CHD2-217ENST00000629136 RMDN1Q96DB5 314 aa11.29□□□□□ -0.6
CHD2-217ENST00000629136 CRACR2AQ9BSW2 395 aa11.29□□□□□ -0.6
CHD2-217ENST00000629136 BBS2Q9BXC9 721 aa11.29□□□□□ -0.6
CHD2-217ENST00000629136 TPSD1Q9BZJ3 242 aa11.29□□□□□ -0.6
CHD2-217ENST00000629136 NUP62CLQ9H1M0 184 aa11.29□□□□□ -0.6
CHD2-217ENST00000629136 CNGB3Q9NQW8 809 aa11.29□□□□□ -0.6
CHD2-217ENST00000629136 LMBRD1Q9NUN5 540 aa11.29□□□□□ -0.6
CHD2-217ENST00000629136 DNAJC17Q9NVM6 304 aaKnown RBP11.29□□□□□ -0.6
CHD2-217ENST00000629136 MARCH2Q9P0N8 246 aa11.29□□□□□ -0.6
CHD2-217ENST00000629136 DEC1Q9P2X7 70 aa11.29□□□□□ -0.6
CHD2-217ENST00000629136 EBF1Q9UH73 591 aa11.29□□□□□ -0.6
CHD2-217ENST00000629136 KLF8O95600 359 aaPredicted RBP11.28□□□□□ -0.6
CHD2-217ENST00000629136 PENKP01210 267 aaPredicted RBP11.28□□□□□ -0.6
CHD2-217ENST00000629136 HMBSP08397 361 aa11.28□□□□□ -0.6
CHD2-217ENST00000629136 LCP1P13796 627 aa11.28□□□□□ -0.6
CHD2-217ENST00000629136 SLC9A1P19634 815 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms