RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 TLR8Q9NR97 1041 aaKnown RBP13.18□□□□□ -0.3
SCN8A-209ENST00000627620 VANGL2Q9ULK5 521 aa13.18□□□□□ -0.3
SCN8A-209ENST00000627620 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.18□□□□□ -0.3
SCN8A-209ENST00000627620 NCAM2O15394 837 aa13.18□□□□□ -0.3
SCN8A-209ENST00000627620 RARRES1P49788 294 aa13.18□□□□□ -0.3
SCN8A-209ENST00000627620 CYLC2Q14093 348 aaPredicted RBP13.18□□□□□ -0.3
SCN8A-209ENST00000627620 CCDC142Q17RM4 750 aa13.18□□□□□ -0.3
SCN8A-209ENST00000627620 RBM43Q6ZSC3 357 aaKnown RBP13.18□□□□□ -0.3
SCN8A-209ENST00000627620 CENPLQ8N0S6 344 aaPredicted RBP13.18□□□□□ -0.3
SCN8A-209ENST00000627620 MIER2Q8N344 545 aa13.18□□□□□ -0.3
SCN8A-209ENST00000627620 MYCBPAPQ8TBZ2 947 aa13.18□□□□□ -0.3
SCN8A-209ENST00000627620 FUT8Q9BYC5 575 aa13.18□□□□□ -0.3
SCN8A-209ENST00000627620 CIPCQ9C0C6 399 aa13.18□□□□□ -0.3
SCN8A-209ENST00000627620 TBC1D23Q9NUY8 699 aa13.18□□□□□ -0.3
SCN8A-209ENST00000627620 TBC1D13Q9NVG8 400 aa13.18□□□□□ -0.3
SCN8A-209ENST00000627620 RBM22Q9NW64 420 aaKnown RBP eCLIP13.18□□□□□ -0.3
SCN8A-209ENST00000627620 DYRK1BQ9Y463 629 aa13.18□□□□□ -0.3
SCN8A-209ENST00000627620 PRR23D1E9PI22 279 aaPredicted RBP13.18□□□□□ -0.3
SCN8A-209ENST00000627620 PDHXO00330 501 aa13.18□□□□□ -0.3
SCN8A-209ENST00000627620 NPM3O75607 178 aaKnown RBP13.18□□□□□ -0.3
SCN8A-209ENST00000627620 PRR23D2P0DMB1 279 aaPredicted RBP13.18□□□□□ -0.3
SCN8A-209ENST00000627620 CPA3P15088 417 aa13.18□□□□□ -0.3
SCN8A-209ENST00000627620 ZNF23P17027 643 aa13.18□□□□□ -0.3
SCN8A-209ENST00000627620 AKAP5P24588 427 aa13.18□□□□□ -0.3
SCN8A-209ENST00000627620 ANXA11P50995 505 aaKnown RBP13.18□□□□□ -0.3
SCN8A-209ENST00000627620 ALDH6A1Q02252 535 aaKnown RBP13.18□□□□□ -0.3
SCN8A-209ENST00000627620 BMPR2Q13873 1038 aa13.18□□□□□ -0.3
SCN8A-209ENST00000627620 NFYCQ13952 458 aa13.18□□□□□ -0.3
SCN8A-209ENST00000627620 OVOS1Q6IE37 1185 aa13.18□□□□□ -0.3
SCN8A-209ENST00000627620 CELF6Q96J87 481 aaKnown RBP13.18□□□□□ -0.3
SCN8A-209ENST00000627620 NOD2Q9HC29 1040 aa13.18□□□□□ -0.3
SCN8A-209ENST00000627620 MPP6Q9NZW5 540 aa13.18□□□□□ -0.3
SCN8A-209ENST00000627620 SLC24A2Q9UI40 661 aa13.18□□□□□ -0.3
SCN8A-209ENST00000627620 CEP170BQ9Y4F5 1589 aaPredicted RBP13.17□□□□□ -0.3
SCN8A-209ENST00000627620 DNAJB2P25686 324 aa13.17□□□□□ -0.3
SCN8A-209ENST00000627620 CCR1P32246 355 aa13.17□□□□□ -0.3
SCN8A-209ENST00000627620 RCN1Q15293 331 aa13.17□□□□□ -0.3
SCN8A-209ENST00000627620 DEFB128Q7Z7B8 93 aa13.17□□□□□ -0.3
SCN8A-209ENST00000627620 C10orf53Q8N6V4 93 aa13.17□□□□□ -0.3
SCN8A-209ENST00000627620 ZNF606Q8WXB4 792 aa13.17□□□□□ -0.3
SCN8A-209ENST00000627620 SALL1Q9NSC2 1324 aa13.17□□□□□ -0.3
SCN8A-209ENST00000627620 FAM86B1E9PN63 330 aa13.17□□□□□ -0.3
SCN8A-209ENST00000627620 PIK3CDO00329 1044 aa13.17□□□□□ -0.3
SCN8A-209ENST00000627620 RASSF9O75901 435 aa13.17□□□□□ -0.3
SCN8A-209ENST00000627620 SLITRK3O94933 977 aa13.17□□□□□ -0.3
SCN8A-209ENST00000627620 FAM86B2P0C5J1 330 aa13.17□□□□□ -0.3
SCN8A-209ENST00000627620 ACAT1P24752 427 aaKnown RBP13.17□□□□□ -0.3
SCN8A-209ENST00000627620 TMEM245Q9H330 911 aa13.17□□□□□ -0.3
SCN8A-209ENST00000627620 WEE1P30291 646 aa13.17□□□□□ -0.3
SCN8A-209ENST00000627620 CHRNB3Q05901 458 aa13.17□□□□□ -0.3
SCN8A-209ENST00000627620 MGAT5Q09328 741 aa13.17□□□□□ -0.3
SCN8A-209ENST00000627620 ELAVL2Q12926 359 aaKnown RBP13.17□□□□□ -0.3
SCN8A-209ENST00000627620 BNC2Q6ZN30 1099 aaPredicted RBP13.17□□□□□ -0.3
SCN8A-209ENST00000627620 KRT78Q8N1N4 520 aa13.17□□□□□ -0.3
SCN8A-209ENST00000627620 AKT1S1Q96B36 256 aa13.17□□□□□ -0.3
SCN8A-209ENST00000627620 NCKIPSDQ9NZQ3 722 aa13.17□□□□□ -0.3
SCN8A-209ENST00000627620 ATP6V1B1P15313 513 aa13.17□□□□□ -0.3
SCN8A-209ENST00000627620 BGNP21810 368 aa13.17□□□□□ -0.3
SCN8A-209ENST00000627620 RANBP1P43487 201 aa13.17□□□□□ -0.3
SCN8A-209ENST00000627620 DSG1Q02413 1049 aa13.17□□□□□ -0.3
SCN8A-209ENST00000627620 ARHGEF19Q8IW93 802 aa13.17□□□□□ -0.3
SCN8A-209ENST00000627620 REPS2Q8NFH8 660 aa13.17□□□□□ -0.3
SCN8A-209ENST00000627620 GPRC5DQ9NZD1 345 aa13.17□□□□□ -0.3
SCN8A-209ENST00000627620 LNPEPQ9UIQ6 1025 aa13.17□□□□□ -0.3
SCN8A-209ENST00000627620 CPSF4O95639 269 aaKnown RBP13.17□□□□□ -0.3
SCN8A-209ENST00000627620 ATP6AP1LQ52LC2 224 aa13.17□□□□□ -0.3
SCN8A-209ENST00000627620 MARC1Q5VT66 337 aa13.17□□□□□ -0.3
SCN8A-209ENST00000627620 CHMP1BQ7LBR1 199 aa13.17□□□□□ -0.3
SCN8A-209ENST00000627620 TMC7Q7Z402 723 aa13.17□□□□□ -0.3
SCN8A-209ENST00000627620 PHACTR4Q8IZ21 702 aa13.17□□□□□ -0.3
SCN8A-209ENST00000627620 FAM9CQ8IZT9 166 aa13.17□□□□□ -0.3
SCN8A-209ENST00000627620 ZNF786Q8N393 782 aa13.17□□□□□ -0.3
SCN8A-209ENST00000627620 MTFR1LQ9H019 292 aa13.17□□□□□ -0.3
SCN8A-209ENST00000627620 INTS13Q9NVM9 706 aa13.17□□□□□ -0.3
SCN8A-209ENST00000627620 IPPQ9Y573 584 aa13.17□□□□□ -0.3
SCN8A-209ENST00000627620 MGAT4DA6NG13 374 aa13.16□□□□□ -0.3
SCN8A-209ENST00000627620 E9PBE3 544 aa13.16□□□□□ -0.3
SCN8A-209ENST00000627620 RNF103O00237 685 aa13.16□□□□□ -0.3
SCN8A-209ENST00000627620 KLHL41O60662 606 aa13.16□□□□□ -0.3
SCN8A-209ENST00000627620 MYL4P12829 197 aa13.16□□□□□ -0.3
SCN8A-209ENST00000627620 GRK2P25098 689 aa13.16□□□□□ -0.3
SCN8A-209ENST00000627620 ADIGQ0VDE8 80 aa13.16□□□□□ -0.3
SCN8A-209ENST00000627620 TDRD5Q8NAT2 981 aaKnown RBP13.16□□□□□ -0.3
SCN8A-209ENST00000627620 LPCAT1Q8NF37 534 aa13.16□□□□□ -0.3
SCN8A-209ENST00000627620 ELMO3Q96BJ8 720 aa13.16□□□□□ -0.3
SCN8A-209ENST00000627620 TMEM120AQ9BXJ8 343 aa13.16□□□□□ -0.3
SCN8A-209ENST00000627620 CEP41Q9BYV8 373 aa13.16□□□□□ -0.3
SCN8A-209ENST00000627620 PCDH9Q9HC56 1237 aa13.16□□□□□ -0.3
SCN8A-209ENST00000627620 DLGAP2Q9P1A6 1054 aa13.16□□□□□ -0.3
SCN8A-209ENST00000627620 KANSL3Q9P2N6 904 aa13.16□□□□□ -0.3
SCN8A-209ENST00000627620 PCDHB5Q9Y5E4 795 aa13.16□□□□□ -0.3
SCN8A-209ENST00000627620 GNG14A0A1W2PPG7 69 aa13.16□□□□□ -0.3
SCN8A-209ENST00000627620 NR5A2O00482 541 aa13.16□□□□□ -0.3
SCN8A-209ENST00000627620 PHKG1Q16816 387 aa13.16□□□□□ -0.3
SCN8A-209ENST00000627620 OTOP1Q7RTM1 612 aa13.16□□□□□ -0.3
SCN8A-209ENST00000627620 SCUBE1Q8IWY4 988 aa13.16□□□□□ -0.3
SCN8A-209ENST00000627620 MTG1Q9BT17 334 aaPredicted RBP13.16□□□□□ -0.3
SCN8A-209ENST00000627620 DMGDHQ9UI17 866 aaKnown RBP13.16□□□□□ -0.3
SCN8A-209ENST00000627620 PLA2G4CQ9UP65 541 aa13.16□□□□□ -0.3
SCN8A-209ENST00000627620 SNX13Q9Y5W8 968 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms