RNA–Protein interactions for RNA: ENST00000625275.2

R3HCC1-210, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-210ENST00000625275 SLC47A2Q86VL8 602 aa21■□□□□ 0.95
R3HCC1-210ENST00000625275 TFAP2BQ92481 460 aa21■□□□□ 0.95
R3HCC1-210ENST00000625275 ZSWIM1Q9BR11 485 aa21■□□□□ 0.95
R3HCC1-210ENST00000625275 LUC7L2Q9Y383 392 aaKnown RBP21■□□□□ 0.95
R3HCC1-210ENST00000625275 ATG13O75143 517 aa20.99■□□□□ 0.95
R3HCC1-210ENST00000625275 OLFM2O95897 454 aa20.99■□□□□ 0.95
R3HCC1-210ENST00000625275 GALK1P51570 392 aa20.99■□□□□ 0.95
R3HCC1-210ENST00000625275 SLC7A9P82251 487 aa20.99■□□□□ 0.95
R3HCC1-210ENST00000625275 IFRD2Q12894 506 aaPredicted RBP20.99■□□□□ 0.95
R3HCC1-210ENST00000625275 SIM2Q14190 667 aaPredicted RBP20.99■□□□□ 0.95
R3HCC1-210ENST00000625275 E4F1Q66K89 784 aaPredicted RBP20.99■□□□□ 0.95
R3HCC1-210ENST00000625275 NAIF1Q69YI7 327 aaPredicted RBP20.99■□□□□ 0.95
R3HCC1-210ENST00000625275 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.99■□□□□ 0.95
R3HCC1-210ENST00000625275 FUKQ8N0W3 1084 aa20.99■□□□□ 0.95
R3HCC1-210ENST00000625275 FBRSL1Q9HCM7 1045 aaKnown RBP20.99■□□□□ 0.95
R3HCC1-210ENST00000625275 NUP205Q92621 2012 aa20.99■□□□□ 0.95
R3HCC1-210ENST00000625275 LEFTY2O00292 366 aa20.98■□□□□ 0.95
R3HCC1-210ENST00000625275 HRO43593 1189 aa20.98■□□□□ 0.95
R3HCC1-210ENST00000625275 RNF40O75150 1001 aa20.98■□□□□ 0.95
R3HCC1-210ENST00000625275 RTN3O95197 1032 aaPredicted RBP20.98■□□□□ 0.95
R3HCC1-210ENST00000625275 NFATC1O95644 943 aa20.98■□□□□ 0.95
R3HCC1-210ENST00000625275 ABL1P00519 1130 aa20.98■□□□□ 0.95
R3HCC1-210ENST00000625275 OAS1P00973 400 aaKnown RBP20.98■□□□□ 0.95
R3HCC1-210ENST00000625275 VDRP11473 427 aa20.98■□□□□ 0.95
R3HCC1-210ENST00000625275 BRD2P25440 801 aaKnown RBP20.98■□□□□ 0.95
R3HCC1-210ENST00000625275 GNA15P30679 374 aa20.98■□□□□ 0.95
R3HCC1-210ENST00000625275 ZXDBP98169 803 aa20.98■□□□□ 0.95
R3HCC1-210ENST00000625275 ARID5AQ03989 594 aa20.98■□□□□ 0.95
R3HCC1-210ENST00000625275 PTK2Q05397 1052 aa20.98■□□□□ 0.95
R3HCC1-210ENST00000625275 NR1H3Q13133 447 aa20.98■□□□□ 0.95
R3HCC1-210ENST00000625275 SRSF5Q13243 272 aaKnown RBP20.98■□□□□ 0.95
R3HCC1-210ENST00000625275 SGO2Q562F6 1265 aa20.98■□□□□ 0.95
R3HCC1-210ENST00000625275 PPP1R26Q5T8A7 1209 aaPredicted RBP20.98■□□□□ 0.95
R3HCC1-210ENST00000625275 PAQR9Q6ZVX9 377 aa20.98■□□□□ 0.95
R3HCC1-210ENST00000625275 WDR5BQ86VZ2 330 aa20.98■□□□□ 0.95
R3HCC1-210ENST00000625275 NUP93Q8N1F7 819 aa20.98■□□□□ 0.95
R3HCC1-210ENST00000625275 ZNF397Q8NF99 534 aaPredicted RBP20.98■□□□□ 0.95
R3HCC1-210ENST00000625275 SLC2A14Q8TDB8 520 aa20.98■□□□□ 0.95
R3HCC1-210ENST00000625275 CD101Q93033 1021 aa20.98■□□□□ 0.95
R3HCC1-210ENST00000625275 CYFIP2Q96F07 1278 aa20.98■□□□□ 0.95
R3HCC1-210ENST00000625275 SMARCD1Q96GM5 515 aa20.98■□□□□ 0.95
R3HCC1-210ENST00000625275 MED10Q9BTT4 135 aa20.98■□□□□ 0.95
R3HCC1-210ENST00000625275 DMAP1Q9NPF5 467 aaPredicted RBP20.98■□□□□ 0.95
R3HCC1-210ENST00000625275 KIAA1257Q9ULG3 409 aa20.98■□□□□ 0.95
R3HCC1-210ENST00000625275 TPM1P09493 284 aa20.97■□□□□ 0.95
R3HCC1-210ENST00000625275 CYP11B1P15538 503 aa20.97■□□□□ 0.95
R3HCC1-210ENST00000625275 YWHAQP27348 245 aa20.97■□□□□ 0.95
R3HCC1-210ENST00000625275 HOXC13P31276 330 aa20.97■□□□□ 0.95
R3HCC1-210ENST00000625275 KRT9P35527 623 aa20.97■□□□□ 0.95
R3HCC1-210ENST00000625275 GOLGA8FQ08AF8 430 aa20.97■□□□□ 0.95
R3HCC1-210ENST00000625275 GOLGA8DPQ0D2H9 430 aa20.97■□□□□ 0.95
R3HCC1-210ENST00000625275 PUM1Q14671 1186 aaKnown RBP eCLIP20.97■□□□□ 0.95
R3HCC1-210ENST00000625275 FBXO43Q4G163 708 aa20.97■□□□□ 0.95
R3HCC1-210ENST00000625275 SFMBT2Q5VUG0 894 aa20.97■□□□□ 0.95
R3HCC1-210ENST00000625275 ARHGAP17Q68EM7 881 aa20.97■□□□□ 0.95
R3HCC1-210ENST00000625275 DRC7Q8IY82 874 aa20.97■□□□□ 0.95
R3HCC1-210ENST00000625275 KIAA1958Q8N8K9 716 aa20.97■□□□□ 0.95
R3HCC1-210ENST00000625275 PDZD8Q8NEN9 1154 aa20.97■□□□□ 0.95
R3HCC1-210ENST00000625275 HNRNPABQ99729 332 aaKnown RBP20.97■□□□□ 0.95
R3HCC1-210ENST00000625275 RNF38Q9H0F5 515 aa20.97■□□□□ 0.95
R3HCC1-210ENST00000625275 LINC00597Q9H2U6 94 aa20.97■□□□□ 0.95
R3HCC1-210ENST00000625275 AIPL1Q9NZN9 384 aa20.97■□□□□ 0.95
R3HCC1-210ENST00000625275 USP18Q9UMW8 372 aa20.97■□□□□ 0.95
R3HCC1-210ENST00000625275 CPQQ9Y646 472 aa20.97■□□□□ 0.95
R3HCC1-210ENST00000625275 O00370 1275 aa20.96■□□□□ 0.95
R3HCC1-210ENST00000625275 MFAP3LO75121 409 aa20.96■□□□□ 0.95
R3HCC1-210ENST00000625275 ADORA2BP29275 332 aa20.96■□□□□ 0.95
R3HCC1-210ENST00000625275 BPIFB4P59827 614 aa20.96■□□□□ 0.95
R3HCC1-210ENST00000625275 LMNB2Q03252 620 aa20.96■□□□□ 0.95
R3HCC1-210ENST00000625275 IRF2BP2Q7Z5L9 587 aa20.96■□□□□ 0.95
R3HCC1-210ENST00000625275 SPC24Q8NBT2 197 aa20.96■□□□□ 0.95
R3HCC1-210ENST00000625275 EPS8L1Q8TE68 723 aa20.96■□□□□ 0.95
R3HCC1-210ENST00000625275 ZNF606Q8WXB4 792 aa20.96■□□□□ 0.95
R3HCC1-210ENST00000625275 OVCA2Q8WZ82 227 aa20.96■□□□□ 0.95
R3HCC1-210ENST00000625275 FBXO32Q969P5 355 aa20.96■□□□□ 0.95
R3HCC1-210ENST00000625275 KCNK16Q96T55 309 aa20.96■□□□□ 0.95
R3HCC1-210ENST00000625275 NUCKS1Q9H1E3 243 aaKnown RBP20.96■□□□□ 0.95
R3HCC1-210ENST00000625275 PARD6AQ9NPB6 346 aa20.96■□□□□ 0.95
R3HCC1-210ENST00000625275 KRT82Q9NSB4 513 aa20.96■□□□□ 0.95
R3HCC1-210ENST00000625275 DLL3Q9NYJ7 618 aa20.96■□□□□ 0.95
R3HCC1-210ENST00000625275 SLC8A2Q9UPR5 921 aa20.96■□□□□ 0.95
R3HCC1-210ENST00000625275 THADAQ6YHU6 1953 aa20.96■□□□□ 0.95
R3HCC1-210ENST00000625275 THAP12O43422 761 aa20.95■□□□□ 0.94
R3HCC1-210ENST00000625275 RETP07949 1114 aa20.95■□□□□ 0.94
R3HCC1-210ENST00000625275 FERP16591 822 aa20.95■□□□□ 0.94
R3HCC1-210ENST00000625275 TGM1P22735 817 aa20.95■□□□□ 0.94
R3HCC1-210ENST00000625275 ADKP55263 362 aaKnown RBP20.95■□□□□ 0.94
R3HCC1-210ENST00000625275 RSPO4Q2I0M5 234 aaPredicted RBP20.95■□□□□ 0.94
R3HCC1-210ENST00000625275 NOP9Q86U38 636 aaKnown RBP20.95■□□□□ 0.94
R3HCC1-210ENST00000625275 FMNL3Q8IVF7 1028 aa20.95■□□□□ 0.94
R3HCC1-210ENST00000625275 SYN2Q92777 582 aaPredicted RBP20.95■□□□□ 0.94
R3HCC1-210ENST00000625275 EZH1Q92800 747 aaPredicted RBP20.95■□□□□ 0.94
R3HCC1-210ENST00000625275 SMPD4Q9NXE4 827 aa20.95■□□□□ 0.94
R3HCC1-210ENST00000625275 NOCTQ9UK39 431 aaKnown RBP20.95■□□□□ 0.94
R3HCC1-210ENST00000625275 TSPAN16Q9UKR8 245 aa20.95■□□□□ 0.94
R3HCC1-210ENST00000625275 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.95■□□□□ 0.94
R3HCC1-210ENST00000625275 NCOR2Q9Y618 2525 aa20.95■□□□□ 0.94
R3HCC1-210ENST00000625275 CCDC163A0A0D9SF12 145 aa20.94■□□□□ 0.94
R3HCC1-210ENST00000625275 AP1G2O75843 785 aa20.94■□□□□ 0.94
R3HCC1-210ENST00000625275 MBL2P11226 248 aaPredicted RBP20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms