RNA–Protein interactions for RNA: ENST00000621093.4

POLR2J3-221, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene POLR2J3, Length 348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-221ENST00000621093 OTUD1Q5VV17 481 aaPredicted RBP11.43□□□□□ -0.58
POLR2J3-221ENST00000621093 TANGO2Q6ICL3 276 aa11.43□□□□□ -0.58
POLR2J3-221ENST00000621093 DNAJC24Q6P3W2 148 aa11.43□□□□□ -0.58
POLR2J3-221ENST00000621093 RSRC2Q7L4I2 434 aaKnown RBP11.43□□□□□ -0.58
POLR2J3-221ENST00000621093 OTOP3Q7RTS5 596 aa11.43□□□□□ -0.58
POLR2J3-221ENST00000621093 MIB1Q86YT6 1006 aa11.43□□□□□ -0.58
POLR2J3-221ENST00000621093 ZDHHC17Q8IUH5 632 aa11.43□□□□□ -0.58
POLR2J3-221ENST00000621093 LRRC8AQ8IWT6 810 aa11.43□□□□□ -0.58
POLR2J3-221ENST00000621093 TDRD5Q8NAT2 981 aaKnown RBP11.43□□□□□ -0.58
POLR2J3-221ENST00000621093 ACRBPQ8NEB7 543 aa11.43□□□□□ -0.58
POLR2J3-221ENST00000621093 TTC16Q8NEE8 873 aa11.43□□□□□ -0.58
POLR2J3-221ENST00000621093 ADAMTS19Q8TE59 1207 aa11.43□□□□□ -0.58
POLR2J3-221ENST00000621093 DQX1Q8TE96 717 aaKnown RBP11.43□□□□□ -0.58
POLR2J3-221ENST00000621093 ATXN2LQ8WWM7 1075 aaKnown RBP11.43□□□□□ -0.58
POLR2J3-221ENST00000621093 RSAD2Q8WXG1 361 aa11.43□□□□□ -0.58
POLR2J3-221ENST00000621093 ANP32BQ92688 251 aaKnown RBP11.43□□□□□ -0.58
POLR2J3-221ENST00000621093 GOLGA1Q92805 767 aa11.43□□□□□ -0.58
POLR2J3-221ENST00000621093 FGF14Q92915 247 aa11.43□□□□□ -0.58
POLR2J3-221ENST00000621093 VCPIP1Q96JH7 1222 aa11.43□□□□□ -0.58
POLR2J3-221ENST00000621093 ZFRQ96KR1 1074 aaKnown RBP11.43□□□□□ -0.58
POLR2J3-221ENST00000621093 ZNF830Q96NB3 372 aaPredicted RBP11.43□□□□□ -0.58
POLR2J3-221ENST00000621093 KXD1Q9BQD3 176 aa11.43□□□□□ -0.58
POLR2J3-221ENST00000621093 SELENOOQ9BVL4 669 aa11.43□□□□□ -0.58
POLR2J3-221ENST00000621093 TRIM7Q9C029 511 aa11.43□□□□□ -0.58
POLR2J3-221ENST00000621093 RAB6CQ9H0N0 254 aa11.43□□□□□ -0.58
POLR2J3-221ENST00000621093 POPDC2Q9HBU9 364 aa11.43□□□□□ -0.58
POLR2J3-221ENST00000621093 ASNSD1Q9NWL6 643 aa11.43□□□□□ -0.58
POLR2J3-221ENST00000621093 GDE1Q9NZC3 331 aa11.43□□□□□ -0.58
POLR2J3-221ENST00000621093 CALCOCO1Q9P1Z2 691 aa11.43□□□□□ -0.58
POLR2J3-221ENST00000621093 WDR35Q9P2L0 1181 aa11.43□□□□□ -0.58
POLR2J3-221ENST00000621093 EPS15L1Q9UBC2 864 aa11.43□□□□□ -0.58
POLR2J3-221ENST00000621093 LIMD1Q9UGP4 676 aa11.43□□□□□ -0.58
POLR2J3-221ENST00000621093 STRIP2Q9ULQ0 834 aa11.43□□□□□ -0.58
POLR2J3-221ENST00000621093 FAM50BQ9Y247 325 aa11.43□□□□□ -0.58
POLR2J3-221ENST00000621093 USTQ9Y2C2 406 aa11.43□□□□□ -0.58
POLR2J3-221ENST00000621093 REXO2Q9Y3B8 237 aaKnown RBP11.43□□□□□ -0.58
POLR2J3-221ENST00000621093 EPN1Q9Y6I3 576 aaPredicted RBP11.43□□□□□ -0.58
POLR2J3-221ENST00000621093 SYNJ2BP-COX16A0A087WUM0 186 aa11.42□□□□□ -0.58
POLR2J3-221ENST00000621093 A0A0U1RQJ8 604 aa11.42□□□□□ -0.58
POLR2J3-221ENST00000621093 SLC12A8A0AV02 714 aa11.42□□□□□ -0.58
POLR2J3-221ENST00000621093 ANKRD62A6NC57 917 aa11.42□□□□□ -0.58
POLR2J3-221ENST00000621093 SIGLEC16A6NMB1 481 aa11.42□□□□□ -0.58
POLR2J3-221ENST00000621093 EIF3CLB5ME19 914 aaKnown RBP11.42□□□□□ -0.58
POLR2J3-221ENST00000621093 LOC730098B7Z3J9 87 aa11.42□□□□□ -0.58
POLR2J3-221ENST00000621093 CAPN9O14815 690 aa11.42□□□□□ -0.58
POLR2J3-221ENST00000621093 NDUFA10O95299 355 aa11.42□□□□□ -0.58
POLR2J3-221ENST00000621093 LCA5LO95447 670 aa11.42□□□□□ -0.58
POLR2J3-221ENST00000621093 GLI1P08151 1106 aa11.42□□□□□ -0.58
POLR2J3-221ENST00000621093 H2AFZP0C0S5 128 aa11.42□□□□□ -0.58
POLR2J3-221ENST00000621093 KRT3P12035 628 aa11.42□□□□□ -0.58
POLR2J3-221ENST00000621093 RFC1P35251 1148 aaPredicted RBP11.42□□□□□ -0.58
POLR2J3-221ENST00000621093 CYLC1P35663 651 aaPredicted RBP11.42□□□□□ -0.58
POLR2J3-221ENST00000621093 SCNN1AP37088 669 aa11.42□□□□□ -0.58
POLR2J3-221ENST00000621093 AVPR1AP37288 418 aa11.42□□□□□ -0.58
POLR2J3-221ENST00000621093 MAGEA1P43355 309 aa11.42□□□□□ -0.58
POLR2J3-221ENST00000621093 SLC7A9P82251 487 aa11.42□□□□□ -0.58
POLR2J3-221ENST00000621093 OGDHQ02218 1023 aa11.42□□□□□ -0.58
POLR2J3-221ENST00000621093 ZP2Q05996 745 aa11.42□□□□□ -0.58
POLR2J3-221ENST00000621093 MAMLD1Q13495 774 aa11.42□□□□□ -0.58
POLR2J3-221ENST00000621093 PLEKHA7Q6IQ23 1121 aa11.42□□□□□ -0.58
POLR2J3-221ENST00000621093 PPP1R2P3Q6NXS1 205 aa11.42□□□□□ -0.58
POLR2J3-221ENST00000621093 MSANTD2Q6P1R3 559 aa11.42□□□□□ -0.58
POLR2J3-221ENST00000621093 VITQ6UXI7 678 aa11.42□□□□□ -0.58
POLR2J3-221ENST00000621093 H2AFVQ71UI9 128 aa11.42□□□□□ -0.58
POLR2J3-221ENST00000621093 TAC4Q86UU9 113 aa11.42□□□□□ -0.58
POLR2J3-221ENST00000621093 CCDC170Q8IYT3 715 aa11.42□□□□□ -0.58
POLR2J3-221ENST00000621093 ZNF276Q8N554 614 aa11.42□□□□□ -0.58
POLR2J3-221ENST00000621093 C3orf20Q8ND61 904 aa11.42□□□□□ -0.58
POLR2J3-221ENST00000621093 RNF139Q8WU17 664 aa11.42□□□□□ -0.58
POLR2J3-221ENST00000621093 RXFP2Q8WXD0 754 aa11.42□□□□□ -0.58
POLR2J3-221ENST00000621093 ATRIPQ8WXE1 791 aa11.42□□□□□ -0.58
POLR2J3-221ENST00000621093 SMARCD2Q92925 531 aa11.42□□□□□ -0.58
POLR2J3-221ENST00000621093 ACSF2Q96CM8 615 aaPredicted RBP11.42□□□□□ -0.58
POLR2J3-221ENST00000621093 NECAB3Q96P71 396 aaPredicted RBP11.42□□□□□ -0.58
POLR2J3-221ENST00000621093 MCEEQ96PE7 176 aa11.42□□□□□ -0.58
POLR2J3-221ENST00000621093 EIF3CQ99613 913 aaKnown RBP11.42□□□□□ -0.58
POLR2J3-221ENST00000621093 DESI2Q9BSY9 194 aa11.42□□□□□ -0.58
POLR2J3-221ENST00000621093 KLF16Q9BXK1 252 aaPredicted RBP11.42□□□□□ -0.58
POLR2J3-221ENST00000621093 NACA2Q9H009 215 aa11.42□□□□□ -0.58
POLR2J3-221ENST00000621093 TDP1Q9NUW8 608 aa11.42□□□□□ -0.58
POLR2J3-221ENST00000621093 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.42□□□□□ -0.58
POLR2J3-221ENST00000621093 MARCH2Q9P0N8 246 aa11.42□□□□□ -0.58
POLR2J3-221ENST00000621093 COX16Q9P0S2 106 aa11.42□□□□□ -0.58
POLR2J3-221ENST00000621093 DNMT3LQ9UJW3 386 aa11.42□□□□□ -0.58
POLR2J3-221ENST00000621093 NR2E1Q9Y466 385 aa11.42□□□□□ -0.58
POLR2J3-221ENST00000621093 COL4A2P08572 1712 aa11.42□□□□□ -0.58
POLR2J3-221ENST00000621093 C5orf42Q9H799 3197 aa11.41□□□□□ -0.58
POLR2J3-221ENST00000621093 COL4A3Q01955 1670 aa11.41□□□□□ -0.58
POLR2J3-221ENST00000621093 RCCD1A6NED2 376 aa11.41□□□□□ -0.58
POLR2J3-221ENST00000621093 C2CD4BA6NLJ0 364 aa11.41□□□□□ -0.58
POLR2J3-221ENST00000621093 SOBPA7XYQ1 873 aa11.41□□□□□ -0.58
POLR2J3-221ENST00000621093 HEPACAM2A8MVW5 462 aa11.41□□□□□ -0.58
POLR2J3-221ENST00000621093 ANHXE9PGG2 379 aa11.41□□□□□ -0.58
POLR2J3-221ENST00000621093 LEFTY2O00292 366 aa11.41□□□□□ -0.58
POLR2J3-221ENST00000621093 TRUB2O95900 331 aaKnown RBP11.41□□□□□ -0.58
POLR2J3-221ENST00000621093 CYP1A2P05177 515 aa11.41□□□□□ -0.58
POLR2J3-221ENST00000621093 PTMAP06454 111 aaKnown RBP11.41□□□□□ -0.58
POLR2J3-221ENST00000621093 ASGR2P07307 311 aa11.41□□□□□ -0.58
POLR2J3-221ENST00000621093 NOS2P35228 1153 aa11.41□□□□□ -0.58
POLR2J3-221ENST00000621093 MATKP42679 507 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms