RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 ASB16Q96NS5 453 aa14.27□□□□□ -0.13
NEK3-210ENST00000620675 CLIC5Q9NZA1 410 aa14.27□□□□□ -0.13
NEK3-210ENST00000620675 CNOT8Q9UFF9 292 aaKnown RBP14.27□□□□□ -0.13
NEK3-210ENST00000620675 GOLGA6L6A8MZA4 724 aa14.26□□□□□ -0.13
NEK3-210ENST00000620675 FGF19O95750 216 aa14.26□□□□□ -0.13
NEK3-210ENST00000620675 BMP1P13497 986 aa14.26□□□□□ -0.13
NEK3-210ENST00000620675 OGDHQ02218 1023 aa14.26□□□□□ -0.13
NEK3-210ENST00000620675 MAMLD1Q13495 774 aa14.26□□□□□ -0.13
NEK3-210ENST00000620675 SH3PXD2AQ5TCZ1 1133 aa14.26□□□□□ -0.13
NEK3-210ENST00000620675 TANGO2Q6ICL3 276 aa14.26□□□□□ -0.13
NEK3-210ENST00000620675 C3orf20Q8ND61 904 aa14.26□□□□□ -0.13
NEK3-210ENST00000620675 DQX1Q8TE96 717 aaKnown RBP14.26□□□□□ -0.13
NEK3-210ENST00000620675 SLC2A13Q96QE2 648 aa14.26□□□□□ -0.13
NEK3-210ENST00000620675 PLA2G2FQ9BZM2 168 aa14.26□□□□□ -0.13
NEK3-210ENST00000620675 POPDC2Q9HBU9 364 aa14.26□□□□□ -0.13
NEK3-210ENST00000620675 ABCC13Q9NSE7 274 aa14.26□□□□□ -0.13
NEK3-210ENST00000620675 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.26□□□□□ -0.13
NEK3-210ENST00000620675 CPQQ9Y646 472 aa14.26□□□□□ -0.13
NEK3-210ENST00000620675 TICRRQ7Z2Z1 1910 aa14.26□□□□□ -0.13
NEK3-210ENST00000620675 HSF2BPO75031 334 aa14.26□□□□□ -0.13
NEK3-210ENST00000620675 LCA5LO95447 670 aa14.26□□□□□ -0.13
NEK3-210ENST00000620675 MBL2P11226 248 aaPredicted RBP14.26□□□□□ -0.13
NEK3-210ENST00000620675 PPP3CCP48454 512 aa14.26□□□□□ -0.13
NEK3-210ENST00000620675 ATXN1P54253 815 aaKnown RBP14.26□□□□□ -0.13
NEK3-210ENST00000620675 GSCP56915 257 aaPredicted RBP14.26□□□□□ -0.13
NEK3-210ENST00000620675 ARHGAP15Q53QZ3 475 aa14.26□□□□□ -0.13
NEK3-210ENST00000620675 EFHC1Q5JVL4 640 aa14.26□□□□□ -0.13
NEK3-210ENST00000620675 PLEKHA7Q6IQ23 1121 aa14.26□□□□□ -0.13
NEK3-210ENST00000620675 DNAJC24Q6P3W2 148 aa14.26□□□□□ -0.13
NEK3-210ENST00000620675 RSRC2Q7L4I2 434 aaKnown RBP14.26□□□□□ -0.13
NEK3-210ENST00000620675 TAC4Q86UU9 113 aa14.26□□□□□ -0.13
NEK3-210ENST00000620675 MSANTD4Q8NCY6 345 aa14.26□□□□□ -0.13
NEK3-210ENST00000620675 ANP32BQ92688 251 aaKnown RBP14.26□□□□□ -0.13
NEK3-210ENST00000620675 BTBD6Q96KE9 485 aa14.26□□□□□ -0.13
NEK3-210ENST00000620675 CFAP57Q96MR6 1250 aa14.26□□□□□ -0.13
NEK3-210ENST00000620675 MCEEQ96PE7 176 aa14.26□□□□□ -0.13
NEK3-210ENST00000620675 KXD1Q9BQD3 176 aa14.26□□□□□ -0.13
NEK3-210ENST00000620675 RASAL2Q9UJF2 1139 aa14.26□□□□□ -0.13
NEK3-210ENST00000620675 MIA3Q5JRA6 1907 aa14.25□□□□□ -0.13
NEK3-210ENST00000620675 SYNJ2BP-COX16A0A087WUM0 186 aa14.25□□□□□ -0.13
NEK3-210ENST00000620675 TRAV19A0A0A6YYK7 116 aa14.25□□□□□ -0.13
NEK3-210ENST00000620675 ASGR2P07307 311 aa14.25□□□□□ -0.13
NEK3-210ENST00000620675 HMBSP08397 361 aa14.25□□□□□ -0.13
NEK3-210ENST00000620675 IRF1P10914 325 aa14.25□□□□□ -0.13
NEK3-210ENST00000620675 KRT3P12035 628 aa14.25□□□□□ -0.13
NEK3-210ENST00000620675 PSEN1P49768 467 aa14.25□□□□□ -0.13
NEK3-210ENST00000620675 ZNF252P-AS1Q0IIN9 211 aa14.25□□□□□ -0.13
NEK3-210ENST00000620675 C15orf59Q2T9L4 293 aaPredicted RBP14.25□□□□□ -0.13
NEK3-210ENST00000620675 ZDHHC17Q8IUH5 632 aa14.25□□□□□ -0.13
NEK3-210ENST00000620675 CCDC170Q8IYT3 715 aa14.25□□□□□ -0.13
NEK3-210ENST00000620675 VCPIP1Q96JH7 1222 aa14.25□□□□□ -0.13
NEK3-210ENST00000620675 NECAB3Q96P71 396 aaPredicted RBP14.25□□□□□ -0.13
NEK3-210ENST00000620675 ASB2Q96Q27 587 aa14.25□□□□□ -0.13
NEK3-210ENST00000620675 GDE1Q9NZC3 331 aa14.25□□□□□ -0.13
NEK3-210ENST00000620675 COX16Q9P0S2 106 aa14.25□□□□□ -0.13
NEK3-210ENST00000620675 LIMD1Q9UGP4 676 aa14.25□□□□□ -0.13
NEK3-210ENST00000620675 STRIP2Q9ULQ0 834 aa14.25□□□□□ -0.13
NEK3-210ENST00000620675 ATG2BQ96BY7 2078 aa14.25□□□□□ -0.13
NEK3-210ENST00000620675 ANKRD62A6NC57 917 aa14.24□□□□□ -0.13
NEK3-210ENST00000620675 SIGLEC16A6NMB1 481 aa14.24□□□□□ -0.13
NEK3-210ENST00000620675 EIF3CLB5ME19 914 aaKnown RBP14.24□□□□□ -0.13
NEK3-210ENST00000620675 SART1O43290 800 aaKnown RBP14.24□□□□□ -0.13
NEK3-210ENST00000620675 DAB1O75553 588 aa14.24□□□□□ -0.13
NEK3-210ENST00000620675 RALAP11233 206 aa14.24□□□□□ -0.13
NEK3-210ENST00000620675 ATP5C1P36542 298 aaKnown RBP14.24□□□□□ -0.13
NEK3-210ENST00000620675 AVPR1AP37288 418 aa14.24□□□□□ -0.13
NEK3-210ENST00000620675 TUBP50607 506 aa14.24□□□□□ -0.13
NEK3-210ENST00000620675 DAB2IPQ5VWQ8 1189 aa14.24□□□□□ -0.13
NEK3-210ENST00000620675 OTOP3Q7RTS5 596 aa14.24□□□□□ -0.13
NEK3-210ENST00000620675 CPNE8Q86YQ8 564 aa14.24□□□□□ -0.13
NEK3-210ENST00000620675 ARHGAP18Q8N392 663 aa14.24□□□□□ -0.13
NEK3-210ENST00000620675 TDRD5Q8NAT2 981 aaKnown RBP14.24□□□□□ -0.13
NEK3-210ENST00000620675 RXFP2Q8WXD0 754 aa14.24□□□□□ -0.13
NEK3-210ENST00000620675 SMARCD2Q92925 531 aa14.24□□□□□ -0.13
NEK3-210ENST00000620675 EIF3CQ99613 913 aaKnown RBP14.24□□□□□ -0.13
NEK3-210ENST00000620675 SELENOOQ9BVL4 669 aa14.24□□□□□ -0.13
NEK3-210ENST00000620675 KLF16Q9BXK1 252 aaPredicted RBP14.24□□□□□ -0.13
NEK3-210ENST00000620675 CD320Q9NPF0 282 aa14.24□□□□□ -0.13
NEK3-210ENST00000620675 OSGEPQ9NPF4 335 aa14.24□□□□□ -0.13
NEK3-210ENST00000620675 ASNSD1Q9NWL6 643 aa14.24□□□□□ -0.13
NEK3-210ENST00000620675 MARCH2Q9P0N8 246 aa14.24□□□□□ -0.13
NEK3-210ENST00000620675 USTQ9Y2C2 406 aa14.24□□□□□ -0.13
NEK3-210ENST00000620675 C2CD4BA6NLJ0 364 aa14.24□□□□□ -0.13
NEK3-210ENST00000620675 CAPN9O14815 690 aa14.24□□□□□ -0.13
NEK3-210ENST00000620675 H2AFZP0C0S5 128 aa14.24□□□□□ -0.13
NEK3-210ENST00000620675 CYLC1P35663 651 aaPredicted RBP14.24□□□□□ -0.13
NEK3-210ENST00000620675 MATKP42679 507 aa14.24□□□□□ -0.13
NEK3-210ENST00000620675 MAGEA1P43355 309 aa14.24□□□□□ -0.13
NEK3-210ENST00000620675 SNX16P57768 344 aa14.24□□□□□ -0.13
NEK3-210ENST00000620675 SLC7A9P82251 487 aa14.24□□□□□ -0.13
NEK3-210ENST00000620675 ZP2Q05996 745 aa14.24□□□□□ -0.13
NEK3-210ENST00000620675 MSANTD2Q6P1R3 559 aa14.24□□□□□ -0.13
NEK3-210ENST00000620675 H2AFVQ71UI9 128 aa14.24□□□□□ -0.13
NEK3-210ENST00000620675 SH3RF2Q8TEC5 729 aa14.24□□□□□ -0.13
NEK3-210ENST00000620675 RNF139Q8WU17 664 aa14.24□□□□□ -0.13
NEK3-210ENST00000620675 PPP1R9BQ96SB3 815 aa14.24□□□□□ -0.13
NEK3-210ENST00000620675 TBCBQ99426 244 aa14.24□□□□□ -0.13
NEK3-210ENST00000620675 LACRTQ9GZZ8 138 aa14.24□□□□□ -0.13
NEK3-210ENST00000620675 NACA2Q9H009 215 aa14.24□□□□□ -0.13
NEK3-210ENST00000620675 TDP1Q9NUW8 608 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms