RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 ATF2P15336 505 aa13.23□□□□□ -0.29
TNFAIP3-209ENST00000619035 NOS2P35228 1153 aa13.23□□□□□ -0.29
TNFAIP3-209ENST00000619035 GRIK1P39086 918 aa13.23□□□□□ -0.29
TNFAIP3-209ENST00000619035 TAZQ16635 292 aa13.23□□□□□ -0.29
TNFAIP3-209ENST00000619035 VARS2Q5ST30 1063 aaKnown RBP13.23□□□□□ -0.29
TNFAIP3-209ENST00000619035 C4orf50Q6ZRC1 276 aa13.23□□□□□ -0.29
TNFAIP3-209ENST00000619035 SYDE1Q6ZW31 735 aaPredicted RBP13.23□□□□□ -0.29
TNFAIP3-209ENST00000619035 GLIS1Q8NBF1 620 aa13.23□□□□□ -0.29
TNFAIP3-209ENST00000619035 SLC7A14Q8TBB6 771 aa13.23□□□□□ -0.29
TNFAIP3-209ENST00000619035 TEKT4Q8WW24 435 aa13.23□□□□□ -0.29
TNFAIP3-209ENST00000619035 ART4Q93070 314 aa13.23□□□□□ -0.29
TNFAIP3-209ENST00000619035 PAWRQ96IZ0 340 aaKnown RBP13.23□□□□□ -0.29
TNFAIP3-209ENST00000619035 TMEM175Q9BSA9 504 aa13.23□□□□□ -0.29
TNFAIP3-209ENST00000619035 MAGEB5Q9BZ81 275 aa13.23□□□□□ -0.29
TNFAIP3-209ENST00000619035 GPR62Q9BZJ7 368 aa13.23□□□□□ -0.29
TNFAIP3-209ENST00000619035 PCDH18Q9HCL0 1135 aa13.23□□□□□ -0.29
TNFAIP3-209ENST00000619035 STAP1Q9ULZ2 295 aa13.23□□□□□ -0.29
TNFAIP3-209ENST00000619035 AP4E1Q9UPM8 1137 aa13.23□□□□□ -0.29
TNFAIP3-209ENST00000619035 SGK1O00141 431 aa13.22□□□□□ -0.29
TNFAIP3-209ENST00000619035 SYN3O14994 580 aa13.22□□□□□ -0.29
TNFAIP3-209ENST00000619035 MDM4O15151 490 aa13.22□□□□□ -0.29
TNFAIP3-209ENST00000619035 IFNB1P01574 187 aa13.22□□□□□ -0.29
TNFAIP3-209ENST00000619035 LTFP02788 710 aa13.22□□□□□ -0.29
TNFAIP3-209ENST00000619035 PECAM1P16284 738 aaPredicted RBP13.22□□□□□ -0.29
TNFAIP3-209ENST00000619035 ACTN2P35609 894 aa13.22□□□□□ -0.29
TNFAIP3-209ENST00000619035 CHKAP35790 457 aa13.22□□□□□ -0.29
TNFAIP3-209ENST00000619035 ARSEP51690 589 aa13.22□□□□□ -0.29
TNFAIP3-209ENST00000619035 VCPP55072 806 aaKnown RBP13.22□□□□□ -0.29
TNFAIP3-209ENST00000619035 ARPP19P56211 112 aa13.22□□□□□ -0.29
TNFAIP3-209ENST00000619035 LMNB2Q03252 620 aa13.22□□□□□ -0.29
TNFAIP3-209ENST00000619035 MTMR3Q13615 1198 aa13.22□□□□□ -0.29
TNFAIP3-209ENST00000619035 PDK2Q15119 407 aa13.22□□□□□ -0.29
TNFAIP3-209ENST00000619035 FAM182AQ5T1J6 154 aa13.22□□□□□ -0.29
TNFAIP3-209ENST00000619035 CNKSR3Q6P9H4 555 aa13.22□□□□□ -0.29
TNFAIP3-209ENST00000619035 NPNTQ6UXI9 565 aa13.22□□□□□ -0.29
TNFAIP3-209ENST00000619035 LRIG3Q6UXM1 1119 aa13.22□□□□□ -0.29
TNFAIP3-209ENST00000619035 LRRC31Q6UY01 552 aa13.22□□□□□ -0.29
TNFAIP3-209ENST00000619035 STRADAQ7RTN6 431 aa13.22□□□□□ -0.29
TNFAIP3-209ENST00000619035 SCN4BQ8IWT1 228 aa13.22□□□□□ -0.29
TNFAIP3-209ENST00000619035 TTC13Q8NBP0 860 aa13.22□□□□□ -0.29
TNFAIP3-209ENST00000619035 EDEM1Q92611 657 aa13.22□□□□□ -0.29
TNFAIP3-209ENST00000619035 SNF8Q96H20 258 aa13.22□□□□□ -0.29
TNFAIP3-209ENST00000619035 PGLYRP2Q96PD5 576 aa13.22□□□□□ -0.29
TNFAIP3-209ENST00000619035 COLEC11Q9BWP8 271 aa13.22□□□□□ -0.29
TNFAIP3-209ENST00000619035 C11orf49Q9H6J7 331 aa13.22□□□□□ -0.29
TNFAIP3-209ENST00000619035 PRDM5Q9NQX1 630 aaPredicted RBP13.22□□□□□ -0.29
TNFAIP3-209ENST00000619035 GOLGA6L10A6NI86 522 aa13.22□□□□□ -0.29
TNFAIP3-209ENST00000619035 OAZ2O95190 189 aa13.22□□□□□ -0.29
TNFAIP3-209ENST00000619035 CLTBP09497 229 aa13.22□□□□□ -0.29
TNFAIP3-209ENST00000619035 ZSCAN5DPP0CG00 497 aa13.22□□□□□ -0.29
TNFAIP3-209ENST00000619035 ETS1P14921 441 aa13.22□□□□□ -0.29
TNFAIP3-209ENST00000619035 IVDP26440 423 aa13.22□□□□□ -0.29
TNFAIP3-209ENST00000619035 GBP1P32455 592 aa13.22□□□□□ -0.29
TNFAIP3-209ENST00000619035 HNRNPH2P55795 449 aaKnown RBP13.22□□□□□ -0.29
TNFAIP3-209ENST00000619035 GNGT1P63211 74 aa13.22□□□□□ -0.29
TNFAIP3-209ENST00000619035 DEUP1Q05D60 604 aa13.22□□□□□ -0.29
TNFAIP3-209ENST00000619035 IFFO1Q0D2I5 559 aa13.22□□□□□ -0.29
TNFAIP3-209ENST00000619035 IKBKEQ14164 716 aa13.22□□□□□ -0.29
TNFAIP3-209ENST00000619035 SLC29A2Q14542 456 aa13.22□□□□□ -0.29
TNFAIP3-209ENST00000619035 KRT71Q3SY84 523 aa13.22□□□□□ -0.29
TNFAIP3-209ENST00000619035 CTXN3Q4LDR2 81 aa13.22□□□□□ -0.29
TNFAIP3-209ENST00000619035 OTUD1Q5VV17 481 aaPredicted RBP13.22□□□□□ -0.29
TNFAIP3-209ENST00000619035 C1orf228Q6PIY5 440 aa13.22□□□□□ -0.29
TNFAIP3-209ENST00000619035 B4GALNT4Q76KP1 1039 aa13.22□□□□□ -0.29
TNFAIP3-209ENST00000619035 SCAMP5Q8TAC9 235 aa13.22□□□□□ -0.29
TNFAIP3-209ENST00000619035 RNF157Q96PX1 679 aa13.22□□□□□ -0.29
TNFAIP3-209ENST00000619035 SLC2A13Q96QE2 648 aa13.22□□□□□ -0.29
TNFAIP3-209ENST00000619035 CAPS2Q9BXY5 557 aa13.22□□□□□ -0.29
TNFAIP3-209ENST00000619035 PNPLA8Q9NP80 782 aa13.22□□□□□ -0.29
TNFAIP3-209ENST00000619035 TMPRSS4Q9NRS4 437 aa13.22□□□□□ -0.29
TNFAIP3-209ENST00000619035 MARCH5Q9NX47 278 aa13.22□□□□□ -0.29
TNFAIP3-209ENST00000619035 MTRF1LQ9UGC7 380 aaKnown RBP13.22□□□□□ -0.29
TNFAIP3-209ENST00000619035 SF3B1O75533 1304 aaKnown RBP eCLIP13.21□□□□□ -0.29
TNFAIP3-209ENST00000619035 APOC4-APOC2K7ER74 178 aa13.21□□□□□ -0.29
TNFAIP3-209ENST00000619035 ENDOD1O94919 500 aa13.21□□□□□ -0.29
TNFAIP3-209ENST00000619035 APOC2P02655 101 aa13.21□□□□□ -0.29
TNFAIP3-209ENST00000619035 FYNP06241 537 aa13.21□□□□□ -0.29
TNFAIP3-209ENST00000619035 NR1D1P20393 614 aa13.21□□□□□ -0.29
TNFAIP3-209ENST00000619035 RDXP35241 583 aaKnown RBP13.21□□□□□ -0.29
TNFAIP3-209ENST00000619035 ITGA8P53708 1063 aa13.21□□□□□ -0.29
TNFAIP3-209ENST00000619035 GUCY1A3Q02108 690 aa13.21□□□□□ -0.29
TNFAIP3-209ENST00000619035 ELAVL2Q12926 359 aaKnown RBP13.21□□□□□ -0.29
TNFAIP3-209ENST00000619035 TFDP2Q14188 446 aa13.21□□□□□ -0.29
TNFAIP3-209ENST00000619035 OASLQ15646 514 aaKnown RBP13.21□□□□□ -0.29
TNFAIP3-209ENST00000619035 ZSCAN26Q16670 478 aa13.21□□□□□ -0.29
TNFAIP3-209ENST00000619035 ANKRD20A8PQ5CZ79 823 aa13.21□□□□□ -0.29
TNFAIP3-209ENST00000619035 FUT10Q6P4F1 479 aa13.21□□□□□ -0.29
TNFAIP3-209ENST00000619035 DRICH1Q6PGQ1 229 aaPredicted RBP13.21□□□□□ -0.29
TNFAIP3-209ENST00000619035 TMEM173Q86WV6 379 aaPredicted RBP13.21□□□□□ -0.29
TNFAIP3-209ENST00000619035 DCP1BQ8IZD4 617 aaKnown RBP13.21□□□□□ -0.29
TNFAIP3-209ENST00000619035 PYROXD2Q8N2H3 581 aa13.21□□□□□ -0.29
TNFAIP3-209ENST00000619035 ALLCQ8N6M5 410 aa13.21□□□□□ -0.29
TNFAIP3-209ENST00000619035 CCDC89Q8N998 374 aa13.21□□□□□ -0.29
TNFAIP3-209ENST00000619035 STKLD1Q8NE28 680 aa13.21□□□□□ -0.29
TNFAIP3-209ENST00000619035 P3H4Q92791 437 aa13.21□□□□□ -0.29
TNFAIP3-209ENST00000619035 NPY6RQ99463 290 aa13.21□□□□□ -0.29
TNFAIP3-209ENST00000619035 ZCWPW1Q9H0M4 648 aa13.21□□□□□ -0.29
TNFAIP3-209ENST00000619035 PABPC3Q9H361 631 aaKnown RBP13.21□□□□□ -0.29
TNFAIP3-209ENST00000619035 AAASQ9NRG9 546 aa13.21□□□□□ -0.29
TNFAIP3-209ENST00000619035 HEY1Q9Y5J3 304 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms