RNA–Protein interactions for RNA: ENST00000618516.4

SYCP1-210, Transcript of synaptonemal complex protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP1, Length 3,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-210ENST00000618516 MMRN1Q13201 1228 aa4.83□□□□□ -1.64
SYCP1-210ENST00000618516 SRSF5Q13243 272 aaKnown RBP4.83□□□□□ -1.64
SYCP1-210ENST00000618516 PDCLQ13371 301 aa4.83□□□□□ -1.64
SYCP1-210ENST00000618516 SFMBT2Q5VUG0 894 aa4.83□□□□□ -1.64
SYCP1-210ENST00000618516 RAP1GAP2Q684P5 730 aa4.83□□□□□ -1.64
SYCP1-210ENST00000618516 FAM183BPQ6ZVS7 135 aa4.83□□□□□ -1.64
SYCP1-210ENST00000618516 FAM124AQ86V42 546 aa4.83□□□□□ -1.64
SYCP1-210ENST00000618516 CPNE8Q86YQ8 564 aa4.83□□□□□ -1.64
SYCP1-210ENST00000618516 TMC8Q8IU68 726 aa4.83□□□□□ -1.64
SYCP1-210ENST00000618516 FMNL3Q8IVF7 1028 aa4.83□□□□□ -1.64
SYCP1-210ENST00000618516 SUGP1Q8IWZ8 645 aaKnown RBP4.83□□□□□ -1.64
SYCP1-210ENST00000618516 DEFB106AQ8N104 65 aa4.83□□□□□ -1.64
SYCP1-210ENST00000618516 ANKRD52Q8NB46 1076 aa4.83□□□□□ -1.64
SYCP1-210ENST00000618516 BPIFB1Q8TDL5 484 aa4.83□□□□□ -1.64
SYCP1-210ENST00000618516 EPS8L1Q8TE68 723 aa4.83□□□□□ -1.64
SYCP1-210ENST00000618516 RLN3Q8WXF3 142 aa4.83□□□□□ -1.64
SYCP1-210ENST00000618516 NECTIN4Q96NY8 510 aa4.83□□□□□ -1.64
SYCP1-210ENST00000618516 PSMB7Q99436 277 aa4.83□□□□□ -1.64
SYCP1-210ENST00000618516 TPSD1Q9BZJ3 242 aa4.83□□□□□ -1.64
SYCP1-210ENST00000618516 CYP3A43Q9HB55 503 aa4.83□□□□□ -1.64
SYCP1-210ENST00000618516 RTN4Q9NQC3 1192 aaKnown RBP4.83□□□□□ -1.64
SYCP1-210ENST00000618516 TLR8Q9NR97 1041 aaKnown RBP4.83□□□□□ -1.64
SYCP1-210ENST00000618516 ADAM22Q9P0K1 906 aa4.83□□□□□ -1.64
SYCP1-210ENST00000618516 VANGL2Q9ULK5 521 aa4.83□□□□□ -1.64
SYCP1-210ENST00000618516 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.83□□□□□ -1.64
SYCP1-210ENST00000618516 PRRC2CQ9Y520 2896 aaKnown RBP4.82□□□□□ -1.64
SYCP1-210ENST00000618516 ZNF638Q14966 1978 aaKnown RBP4.82□□□□□ -1.64
SYCP1-210ENST00000618516 KRBA1A5PL33 1030 aa4.82□□□□□ -1.64
SYCP1-210ENST00000618516 F11P03951 625 aa4.82□□□□□ -1.64
SYCP1-210ENST00000618516 GYPCP04921 128 aa4.82□□□□□ -1.64
SYCP1-210ENST00000618516 TPM1P09493 284 aa4.82□□□□□ -1.64
SYCP1-210ENST00000618516 HNRNPA1P09651 372 aaKnown RBP eCLIP4.82□□□□□ -1.64
SYCP1-210ENST00000618516 SOX5P35711 763 aa4.82□□□□□ -1.64
SYCP1-210ENST00000618516 CLDN10P78369 228 aa4.82□□□□□ -1.64
SYCP1-210ENST00000618516 CENPCQ03188 943 aa4.82□□□□□ -1.64
SYCP1-210ENST00000618516 ACCSLQ4AC99 568 aa4.82□□□□□ -1.64
SYCP1-210ENST00000618516 ANO7Q6IWH7 933 aa4.82□□□□□ -1.64
SYCP1-210ENST00000618516 VSTM1Q6UX27 236 aa4.82□□□□□ -1.64
SYCP1-210ENST00000618516 ARMCX6Q7L4S7 300 aa4.82□□□□□ -1.64
SYCP1-210ENST00000618516 SCD5Q86SK9 330 aa4.82□□□□□ -1.64
SYCP1-210ENST00000618516 CCDC50Q8IVM0 306 aa4.82□□□□□ -1.64
SYCP1-210ENST00000618516 SHC3Q92529 594 aa4.82□□□□□ -1.64
SYCP1-210ENST00000618516 SUSD6Q92537 303 aa4.82□□□□□ -1.64
SYCP1-210ENST00000618516 PCDHB18PQ96TA0 734 aa4.82□□□□□ -1.64
SYCP1-210ENST00000618516 HNRNPABQ99729 332 aaKnown RBP4.82□□□□□ -1.64
SYCP1-210ENST00000618516 SPON2Q9BUD6 331 aa4.82□□□□□ -1.64
SYCP1-210ENST00000618516 PACSIN1Q9BY11 444 aa4.82□□□□□ -1.64
SYCP1-210ENST00000618516 NUCKS1Q9H1E3 243 aaKnown RBP4.82□□□□□ -1.64
SYCP1-210ENST00000618516 SLC6A17Q9H1V8 727 aa4.82□□□□□ -1.64
SYCP1-210ENST00000618516 TASP1Q9H6P5 420 aa4.82□□□□□ -1.64
SYCP1-210ENST00000618516 ZWILCHQ9H900 591 aa4.82□□□□□ -1.64
SYCP1-210ENST00000618516 ARHGEF3Q9NR81 526 aa4.82□□□□□ -1.64
SYCP1-210ENST00000618516 MPP6Q9NZW5 540 aa4.82□□□□□ -1.64
SYCP1-210ENST00000618516 SIK3Q9Y2K2 1263 aa4.82□□□□□ -1.64
SYCP1-210ENST00000618516 RAD54BQ9Y620 910 aa4.82□□□□□ -1.64
SYCP1-210ENST00000618516 AGRPO00253 132 aa4.82□□□□□ -1.64
SYCP1-210ENST00000618516 LTFP02788 710 aa4.82□□□□□ -1.64
SYCP1-210ENST00000618516 FTLP02792 175 aaPredicted RBP4.82□□□□□ -1.64
SYCP1-210ENST00000618516 RALAP11233 206 aa4.82□□□□□ -1.64
SYCP1-210ENST00000618516 HLA-EP13747 358 aa4.82□□□□□ -1.64
SYCP1-210ENST00000618516 RRM1P23921 792 aa4.82□□□□□ -1.64
SYCP1-210ENST00000618516 EIF4A3P38919 411 aaKnown RBP4.82□□□□□ -1.64
SYCP1-210ENST00000618516 GPD2P43304 727 aa4.82□□□□□ -1.64
SYCP1-210ENST00000618516 SULT1E1P49888 294 aa4.82□□□□□ -1.64
SYCP1-210ENST00000618516 GCNT1Q02742 428 aa4.82□□□□□ -1.64
SYCP1-210ENST00000618516 INCA1Q0VD86 236 aa4.82□□□□□ -1.64
SYCP1-210ENST00000618516 PKN3Q6P5Z2 889 aa4.82□□□□□ -1.64
SYCP1-210ENST00000618516 C1orf228Q6PIY5 440 aa4.82□□□□□ -1.64
SYCP1-210ENST00000618516 TOGARAM2Q6ZUX3 1019 aa4.82□□□□□ -1.64
SYCP1-210ENST00000618516 APTXQ7Z2E3 356 aaKnown RBP4.82□□□□□ -1.64
SYCP1-210ENST00000618516 ZNF571Q7Z3V5 609 aaPredicted RBP4.82□□□□□ -1.64
SYCP1-210ENST00000618516 UNC93AQ86WB7 457 aa4.82□□□□□ -1.64
SYCP1-210ENST00000618516 CHSY1Q86X52 802 aa4.82□□□□□ -1.64
SYCP1-210ENST00000618516 CHPFQ8IZ52 775 aa4.82□□□□□ -1.64
SYCP1-210ENST00000618516 CRYBG2Q8N1P7 616 aa4.82□□□□□ -1.64
SYCP1-210ENST00000618516 CARNMT1Q8N4J0 409 aa4.82□□□□□ -1.64
SYCP1-210ENST00000618516 TAB3Q8N5C8 712 aaPredicted RBP4.82□□□□□ -1.64
SYCP1-210ENST00000618516 TMEM35BQ8NCS4 154 aa4.82□□□□□ -1.64
SYCP1-210ENST00000618516 ZNF397Q8NF99 534 aaPredicted RBP4.82□□□□□ -1.64
SYCP1-210ENST00000618516 JOSD2Q8TAC2 188 aa4.82□□□□□ -1.64
SYCP1-210ENST00000618516 CYB5D2Q8WUJ1 264 aa4.82□□□□□ -1.64
SYCP1-210ENST00000618516 TAF4BQ92750 862 aa4.82□□□□□ -1.64
SYCP1-210ENST00000618516 C18orf8Q96DM3 657 aa4.82□□□□□ -1.64
SYCP1-210ENST00000618516 NOX5Q96PH1 765 aa4.82□□□□□ -1.64
SYCP1-210ENST00000618516 GANQ9H2C0 597 aa4.82□□□□□ -1.64
SYCP1-210ENST00000618516 TBC1D17Q9HA65 648 aa4.82□□□□□ -1.64
SYCP1-210ENST00000618516 DNAJC17Q9NVM6 304 aaKnown RBP4.82□□□□□ -1.64
SYCP1-210ENST00000618516 LIMA1Q9UHB6 759 aaKnown RBP4.82□□□□□ -1.64
SYCP1-210ENST00000618516 STRIP2Q9ULQ0 834 aa4.82□□□□□ -1.64
SYCP1-210ENST00000618516 CLEC4EQ9ULY5 219 aa4.82□□□□□ -1.64
SYCP1-210ENST00000618516 SORCS3Q9UPU3 1222 aa4.82□□□□□ -1.64
SYCP1-210ENST00000618516 COQ4Q9Y3A0 265 aa4.82□□□□□ -1.64
SYCP1-210ENST00000618516 ATG2AQ2TAZ0 1938 aa4.82□□□□□ -1.64
SYCP1-210ENST00000618516 PLXNA3P51805 1871 aa4.82□□□□□ -1.64
SYCP1-210ENST00000618516 C2orf16Q68DN1 1984 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 A0A0U1RQJ8 604 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 MED7O43513 233 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 BUB1O43683 1085 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 EFEMP2O95967 443 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 KLKB1P03952 638 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms