RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 MMP19Q99542 508 aa10.96□□□□□ -0.65
CLTCL1-209ENST00000617103 RRN3Q9NYV6 651 aa10.96□□□□□ -0.65
CLTCL1-209ENST00000617103 CLIC5Q9NZA1 410 aa10.96□□□□□ -0.65
CLTCL1-209ENST00000617103 KDM6AO15550 1401 aaPredicted RBP10.96□□□□□ -0.65
CLTCL1-209ENST00000617103 M0QYT0 321 aa10.96□□□□□ -0.65
CLTCL1-209ENST00000617103 MRASO14807 208 aa10.96□□□□□ -0.65
CLTCL1-209ENST00000617103 PEX1O43933 1283 aa10.96□□□□□ -0.65
CLTCL1-209ENST00000617103 ITGB3P05106 788 aa10.96□□□□□ -0.65
CLTCL1-209ENST00000617103 PCSK1P29120 753 aa10.96□□□□□ -0.65
CLTCL1-209ENST00000617103 RPA3P35244 121 aaPredicted RBP10.96□□□□□ -0.65
CLTCL1-209ENST00000617103 KRT20P35900 424 aa10.96□□□□□ -0.65
CLTCL1-209ENST00000617103 SREBF1P36956 1147 aa10.96□□□□□ -0.65
CLTCL1-209ENST00000617103 NCF4Q15080 339 aa10.96□□□□□ -0.65
CLTCL1-209ENST00000617103 SV2CQ496J9 727 aa10.96□□□□□ -0.65
CLTCL1-209ENST00000617103 Q4G0T1 1027 aa10.96□□□□□ -0.65
CLTCL1-209ENST00000617103 SYTL3Q4VX76 610 aa10.96□□□□□ -0.65
CLTCL1-209ENST00000617103 KYAT3Q6YP21 454 aaKnown RBP10.96□□□□□ -0.65
CLTCL1-209ENST00000617103 SEPHS2Q99611 448 aa10.96□□□□□ -0.65
CLTCL1-209ENST00000617103 VTA1Q9NP79 307 aa10.96□□□□□ -0.65
CLTCL1-209ENST00000617103 STK39Q9UEW8 545 aa10.96□□□□□ -0.65
CLTCL1-209ENST00000617103 DRG1Q9Y295 367 aaKnown RBP10.96□□□□□ -0.65
CLTCL1-209ENST00000617103 RNF17Q9BXT8 1623 aaKnown RBP10.96□□□□□ -0.65
CLTCL1-209ENST00000617103 KRT87PA6NCN2 255 aa10.96□□□□□ -0.66
CLTCL1-209ENST00000617103 F8W810 466 aa10.96□□□□□ -0.66
CLTCL1-209ENST00000617103 NBNO60934 754 aa10.96□□□□□ -0.66
CLTCL1-209ENST00000617103 KRT36O76013 467 aa10.96□□□□□ -0.66
CLTCL1-209ENST00000617103 BAIAP3O94812 1187 aa10.96□□□□□ -0.66
CLTCL1-209ENST00000617103 MRPS22P82650 360 aaKnown RBP10.96□□□□□ -0.66
CLTCL1-209ENST00000617103 AMPD2Q01433 879 aa10.96□□□□□ -0.66
CLTCL1-209ENST00000617103 TKFCQ3LXA3 575 aa10.96□□□□□ -0.66
CLTCL1-209ENST00000617103 ZRANB3Q5FWF4 1079 aa10.96□□□□□ -0.66
CLTCL1-209ENST00000617103 EXOC3L1Q86VI1 746 aa10.96□□□□□ -0.66
CLTCL1-209ENST00000617103 RAB42Q8N4Z0 105 aa10.96□□□□□ -0.66
CLTCL1-209ENST00000617103 C19orf18Q8NEA5 215 aa10.96□□□□□ -0.66
CLTCL1-209ENST00000617103 FNIP1Q8TF40 1166 aa10.96□□□□□ -0.66
CLTCL1-209ENST00000617103 GPRC5CQ9NQ84 441 aa10.96□□□□□ -0.66
CLTCL1-209ENST00000617103 AVENQ9NQS1 362 aaPredicted RBP10.96□□□□□ -0.66
CLTCL1-209ENST00000617103 GPATCH2LQ9NWQ4 482 aa10.96□□□□□ -0.66
CLTCL1-209ENST00000617103 WWOXQ9NZC7 414 aa10.96□□□□□ -0.66
CLTCL1-209ENST00000617103 CEMIPQ8WUJ3 1361 aa10.96□□□□□ -0.66
CLTCL1-209ENST00000617103 PTPRUQ92729 1446 aa10.96□□□□□ -0.66
CLTCL1-209ENST00000617103 ABCA6Q8N139 1617 aa10.96□□□□□ -0.66
CLTCL1-209ENST00000617103 MAP3K13O43283 966 aa10.96□□□□□ -0.66
CLTCL1-209ENST00000617103 PRKCIP41743 596 aa10.96□□□□□ -0.66
CLTCL1-209ENST00000617103 ALDH1A3P47895 512 aa10.96□□□□□ -0.66
CLTCL1-209ENST00000617103 NPTX2P47972 431 aa10.96□□□□□ -0.66
CLTCL1-209ENST00000617103 SERPINH1P50454 418 aaKnown RBP10.96□□□□□ -0.66
CLTCL1-209ENST00000617103 CCT8P50990 548 aa10.96□□□□□ -0.66
CLTCL1-209ENST00000617103 PDK3Q15120 406 aa10.96□□□□□ -0.66
CLTCL1-209ENST00000617103 EARS2Q5JPH6 523 aaKnown RBP10.96□□□□□ -0.66
CLTCL1-209ENST00000617103 IQCKQ8N0W5 287 aa10.96□□□□□ -0.66
CLTCL1-209ENST00000617103 STKLD1Q8NE28 680 aa10.96□□□□□ -0.66
CLTCL1-209ENST00000617103 LRRC39Q96DD0 335 aa10.96□□□□□ -0.66
CLTCL1-209ENST00000617103 GPAMQ9HCL2 828 aa10.96□□□□□ -0.66
CLTCL1-209ENST00000617103 DDIT4Q9NX09 232 aa10.96□□□□□ -0.66
CLTCL1-209ENST00000617103 KLHL3Q9UH77 587 aa10.96□□□□□ -0.66
CLTCL1-209ENST00000617103 MAGEB16A2A368 324 aa10.95□□□□□ -0.66
CLTCL1-209ENST00000617103 PPP3CCP48454 512 aa10.95□□□□□ -0.66
CLTCL1-209ENST00000617103 CYP24A1Q07973 514 aa10.95□□□□□ -0.66
CLTCL1-209ENST00000617103 VAC14Q08AM6 782 aa10.95□□□□□ -0.66
CLTCL1-209ENST00000617103 RIPK1Q13546 671 aa10.95□□□□□ -0.66
CLTCL1-209ENST00000617103 FASTKQ14296 549 aaKnown RBP10.95□□□□□ -0.66
CLTCL1-209ENST00000617103 PDK4Q16654 411 aa10.95□□□□□ -0.66
CLTCL1-209ENST00000617103 ZNF618Q5T7W0 954 aa10.95□□□□□ -0.66
CLTCL1-209ENST00000617103 PPP1R10Q96QC0 940 aaKnown RBP10.95□□□□□ -0.66
CLTCL1-209ENST00000617103 POP1Q99575 1024 aaKnown RBP10.95□□□□□ -0.66
CLTCL1-209ENST00000617103 CGRRF1Q99675 332 aa10.95□□□□□ -0.66
CLTCL1-209ENST00000617103 GORASP1Q9BQQ3 440 aa10.95□□□□□ -0.66
CLTCL1-209ENST00000617103 ROGDIQ9GZN7 287 aa10.95□□□□□ -0.66
CLTCL1-209ENST00000617103 PLGRKTQ9HBL7 147 aa10.95□□□□□ -0.66
CLTCL1-209ENST00000617103 CHST7Q9NS84 486 aa10.95□□□□□ -0.66
CLTCL1-209ENST00000617103 PCYOX1Q9UHG3 505 aa10.95□□□□□ -0.66
CLTCL1-209ENST00000617103 STX7O15400 261 aaKnown RBP10.95□□□□□ -0.66
CLTCL1-209ENST00000617103 HSMCR30P0CW71 290 aa10.95□□□□□ -0.66
CLTCL1-209ENST00000617103 HMGCS2P54868 508 aa10.95□□□□□ -0.66
CLTCL1-209ENST00000617103 ITGADQ13349 1161 aa10.95□□□□□ -0.66
CLTCL1-209ENST00000617103 CSHL1Q14406 222 aa10.95□□□□□ -0.66
CLTCL1-209ENST00000617103 RGS21Q2M5E4 152 aa10.95□□□□□ -0.66
CLTCL1-209ENST00000617103 PARP6Q2NL67 630 aa10.95□□□□□ -0.66
CLTCL1-209ENST00000617103 WDR59Q6PJI9 974 aa10.95□□□□□ -0.66
CLTCL1-209ENST00000617103 ARHGEF19Q8IW93 802 aa10.95□□□□□ -0.66
CLTCL1-209ENST00000617103 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.95□□□□□ -0.661e-6■■■■■ 92.8
CLTCL1-209ENST00000617103 EMC1Q8N766 993 aa10.95□□□□□ -0.66
CLTCL1-209ENST00000617103 SETD9Q8NE22 299 aa10.95□□□□□ -0.66
CLTCL1-209ENST00000617103 MAGEC3Q8TD91 643 aa10.95□□□□□ -0.66
CLTCL1-209ENST00000617103 DNPEPQ9ULA0 475 aa10.95□□□□□ -0.66
CLTCL1-209ENST00000617103 TMCC3Q9ULS5 477 aa10.95□□□□□ -0.66
CLTCL1-209ENST00000617103 POLIQ9UNA4 740 aa10.95□□□□□ -0.66
CLTCL1-209ENST00000617103 TPRKBQ9Y3C4 175 aa10.95□□□□□ -0.66
CLTCL1-209ENST00000617103 ZC3H4Q9UPT8 1303 aaKnown RBP10.95□□□□□ -0.66
CLTCL1-209ENST00000617103 TRDMT1O14717 391 aaKnown RBP10.95□□□□□ -0.66
CLTCL1-209ENST00000617103 TSC22D2O75157 780 aa10.95□□□□□ -0.66
CLTCL1-209ENST00000617103 VPS26AO75436 327 aa10.95□□□□□ -0.66
CLTCL1-209ENST00000617103 PGM3O95394 542 aa10.95□□□□□ -0.66
CLTCL1-209ENST00000617103 RRM2P31350 389 aa10.95□□□□□ -0.66
CLTCL1-209ENST00000617103 IL12RB1P42701 662 aa10.95□□□□□ -0.66
CLTCL1-209ENST00000617103 TTLL9Q3SXZ7 439 aa10.95□□□□□ -0.66
CLTCL1-209ENST00000617103 SPANXN2Q5MJ10 180 aa10.95□□□□□ -0.66
CLTCL1-209ENST00000617103 GRTP1Q5TC63 336 aa10.95□□□□□ -0.66
CLTCL1-209ENST00000617103 MFSD7Q6UXD7 560 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms