RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 TYMPP19971 482 aa10.05□□□□□ -0.8
TNFRSF9-204ENST00000615230 OR1E1P30953 314 aa10.05□□□□□ -0.8
TNFRSF9-204ENST00000615230 NPY2RP49146 381 aa10.05□□□□□ -0.8
TNFRSF9-204ENST00000615230 LIG3P49916 1009 aa10.05□□□□□ -0.8
TNFRSF9-204ENST00000615230 IRF5Q13568 498 aa10.05□□□□□ -0.8
TNFRSF9-204ENST00000615230 PALB2Q86YC2 1186 aa10.05□□□□□ -0.8
TNFRSF9-204ENST00000615230 RGL4Q8IZJ4 473 aa10.05□□□□□ -0.8
TNFRSF9-204ENST00000615230 IRGQQ8WZA9 623 aa10.05□□□□□ -0.8
TNFRSF9-204ENST00000615230 STAMBPL1Q96FJ0 436 aa10.05□□□□□ -0.8
TNFRSF9-204ENST00000615230 BRD9Q9H8M2 597 aa10.05□□□□□ -0.8
TNFRSF9-204ENST00000615230 MARCH2Q9P0N8 246 aa10.05□□□□□ -0.8
TNFRSF9-204ENST00000615230 USP18Q9UMW8 372 aa10.05□□□□□ -0.8
TNFRSF9-204ENST00000615230 CRYL1Q9Y2S2 319 aa10.05□□□□□ -0.8
TNFRSF9-204ENST00000615230 STARD13Q9Y3M8 1113 aa10.05□□□□□ -0.8
TNFRSF9-204ENST00000615230 SPEF2Q9C093 1822 aa10.05□□□□□ -0.8
TNFRSF9-204ENST00000615230 COL2A1P02458 1487 aaPredicted RBP10.05□□□□□ -0.8
TNFRSF9-204ENST00000615230 SOCS7O14512 581 aa10.05□□□□□ -0.8
TNFRSF9-204ENST00000615230 GRM6O15303 877 aa10.05□□□□□ -0.8
TNFRSF9-204ENST00000615230 CST8O60676 142 aa10.05□□□□□ -0.8
TNFRSF9-204ENST00000615230 SLC9A1P19634 815 aa10.05□□□□□ -0.8
TNFRSF9-204ENST00000615230 PSMA3P25788 255 aa10.05□□□□□ -0.8
TNFRSF9-204ENST00000615230 KRT20P35900 424 aa10.05□□□□□ -0.8
TNFRSF9-204ENST00000615230 SARSP49591 514 aaKnown RBP10.05□□□□□ -0.8
TNFRSF9-204ENST00000615230 ACOX1Q15067 660 aa10.05□□□□□ -0.8
TNFRSF9-204ENST00000615230 PLPP4Q5VZY2 271 aa10.05□□□□□ -0.8
TNFRSF9-204ENST00000615230 FBXL19Q6PCT2 694 aa10.05□□□□□ -0.8
TNFRSF9-204ENST00000615230 C1orf54Q8WWF1 131 aa10.05□□□□□ -0.8
TNFRSF9-204ENST00000615230 MAML1Q92585 1016 aa10.05□□□□□ -0.8
TNFRSF9-204ENST00000615230 TTC17Q96AE7 1141 aa10.05□□□□□ -0.8
TNFRSF9-204ENST00000615230 ARMC7Q9H6L4 198 aa10.05□□□□□ -0.8
TNFRSF9-204ENST00000615230 KIAA1522Q9P206 1035 aaPredicted RBP10.05□□□□□ -0.8
TNFRSF9-204ENST00000615230 BAIAP3O94812 1187 aa10.05□□□□□ -0.8
TNFRSF9-204ENST00000615230 GLI1P08151 1106 aa10.05□□□□□ -0.8
TNFRSF9-204ENST00000615230 NPR3P17342 541 aa10.05□□□□□ -0.8
TNFRSF9-204ENST00000615230 MZF1P28698 734 aaPredicted RBP10.05□□□□□ -0.8
TNFRSF9-204ENST00000615230 NOS2P35228 1153 aa10.05□□□□□ -0.8
TNFRSF9-204ENST00000615230 PSMC6P62333 389 aa10.05□□□□□ -0.8
TNFRSF9-204ENST00000615230 ADIGQ0VDE8 80 aa10.05□□□□□ -0.8
TNFRSF9-204ENST00000615230 ARMC12Q5T9G4 340 aa10.05□□□□□ -0.8
TNFRSF9-204ENST00000615230 TPGS2Q68CL5 300 aa10.05□□□□□ -0.8
TNFRSF9-204ENST00000615230 TBK1Q9UHD2 729 aa10.05□□□□□ -0.8
TNFRSF9-204ENST00000615230 PLAAQ9Y263 795 aa10.05□□□□□ -0.8
TNFRSF9-204ENST00000615230 SHPRHQ149N8 1683 aa10.05□□□□□ -0.8
TNFRSF9-204ENST00000615230 KCPQ6ZWJ8 1503 aa10.05□□□□□ -0.8
TNFRSF9-204ENST00000615230 FOXN1O15353 648 aa10.05□□□□□ -0.8
TNFRSF9-204ENST00000615230 HNRNPCL1O60812 293 aaKnown RBP10.05□□□□□ -0.8
TNFRSF9-204ENST00000615230 GLP2RO95838 553 aa10.05□□□□□ -0.8
TNFRSF9-204ENST00000615230 DNTTP04053 509 aa10.05□□□□□ -0.8
TNFRSF9-204ENST00000615230 APRTP07741 180 aa10.05□□□□□ -0.8
TNFRSF9-204ENST00000615230 SNHG28P0DPA3 235 aa10.05□□□□□ -0.8
TNFRSF9-204ENST00000615230 MPPE1Q53F39 396 aa10.05□□□□□ -0.8
TNFRSF9-204ENST00000615230 KLHL35Q6PF15 583 aa10.05□□□□□ -0.8
TNFRSF9-204ENST00000615230 ROPN1BQ9BZX4 212 aaPredicted RBP10.05□□□□□ -0.8
TNFRSF9-204ENST00000615230 ROPN1Q9HAT0 212 aaPredicted RBP10.05□□□□□ -0.8
TNFRSF9-204ENST00000615230 ARIH2O95376 493 aa10.04□□□□□ -0.8
TNFRSF9-204ENST00000615230 HDCP19113 662 aa10.04□□□□□ -0.8
TNFRSF9-204ENST00000615230 PIK3CGP48736 1102 aa10.04□□□□□ -0.8
TNFRSF9-204ENST00000615230 NAA25Q14CX7 972 aa10.04□□□□□ -0.8
TNFRSF9-204ENST00000615230 TCEA2Q15560 299 aa10.04□□□□□ -0.8
TNFRSF9-204ENST00000615230 C11orf63Q6NUN7 778 aa10.04□□□□□ -0.8
TNFRSF9-204ENST00000615230 SLC9A7Q96T83 725 aa10.04□□□□□ -0.8
TNFRSF9-204ENST00000615230 AVENQ9NQS1 362 aaPredicted RBP10.04□□□□□ -0.8
TNFRSF9-204ENST00000615230 FBXO10Q9UK96 956 aa10.04□□□□□ -0.8
TNFRSF9-204ENST00000615230 ATG13O75143 517 aa10.04□□□□□ -0.8
TNFRSF9-204ENST00000615230 ALOX15P16050 662 aaPredicted RBP10.04□□□□□ -0.8
TNFRSF9-204ENST00000615230 ZNF7P17097 686 aaPredicted RBP10.04□□□□□ -0.8
TNFRSF9-204ENST00000615230 COMTP21964 271 aa10.04□□□□□ -0.8
TNFRSF9-204ENST00000615230 CDH8P55286 799 aa10.04□□□□□ -0.8
TNFRSF9-204ENST00000615230 KCNA1Q09470 495 aa10.04□□□□□ -0.8
TNFRSF9-204ENST00000615230 ABHD15Q6UXT9 468 aa10.04□□□□□ -0.8
TNFRSF9-204ENST00000615230 MTSS1LQ765P7 747 aa10.04□□□□□ -0.8
TNFRSF9-204ENST00000615230 CDR2LQ86X02 465 aaPredicted RBP10.04□□□□□ -0.8
TNFRSF9-204ENST00000615230 HES6Q96HZ4 224 aa10.04□□□□□ -0.8
TNFRSF9-204ENST00000615230 POLMQ9NP87 494 aaPredicted RBP10.04□□□□□ -0.8
TNFRSF9-204ENST00000615230 CHCHD3Q9NX63 227 aaKnown RBP10.04□□□□□ -0.8
TNFRSF9-204ENST00000615230 TTC7AQ9ULT0 858 aaPredicted RBP10.04□□□□□ -0.8
TNFRSF9-204ENST00000615230 GUCY1B2O75343 617 aa10.04□□□□□ -0.8
TNFRSF9-204ENST00000615230 PROSCO94903 275 aa10.04□□□□□ -0.8
TNFRSF9-204ENST00000615230 SERPINB4P48594 390 aa10.04□□□□□ -0.8
TNFRSF9-204ENST00000615230 SERPINB8P50452 374 aa10.04□□□□□ -0.8
TNFRSF9-204ENST00000615230 ZNF211Q13398 564 aaPredicted RBP10.04□□□□□ -0.8
TNFRSF9-204ENST00000615230 SYCP2LQ5T4T6 812 aa10.04□□□□□ -0.8
TNFRSF9-204ENST00000615230 RASGRP2Q7LDG7 609 aa10.04□□□□□ -0.8
TNFRSF9-204ENST00000615230 SMG7Q92540 1137 aaKnown RBP10.04□□□□□ -0.8
TNFRSF9-204ENST00000615230 CRYBG1Q9Y4K1 1723 aa10.04□□□□□ -0.8
TNFRSF9-204ENST00000615230 ZNF536O15090 1300 aa10.04□□□□□ -0.8
TNFRSF9-204ENST00000615230 TRPC5OSA6NMA1 111 aa10.04□□□□□ -0.8
TNFRSF9-204ENST00000615230 MEIS2O14770 477 aa10.04□□□□□ -0.8
TNFRSF9-204ENST00000615230 RARGP13631 454 aa10.04□□□□□ -0.8
TNFRSF9-204ENST00000615230 TUBP50607 506 aa10.04□□□□□ -0.8
TNFRSF9-204ENST00000615230 NCALDP61601 193 aa10.04□□□□□ -0.8
TNFRSF9-204ENST00000615230 MUM1Q2TAK8 710 aa10.04□□□□□ -0.8
TNFRSF9-204ENST00000615230 BRMS1LQ5PSV4 323 aa10.04□□□□□ -0.8
TNFRSF9-204ENST00000615230 CENPPQ6IPU0 288 aa10.04□□□□□ -0.8
TNFRSF9-204ENST00000615230 SLC9A9Q8IVB4 645 aa10.04□□□□□ -0.8
TNFRSF9-204ENST00000615230 PXYLP1Q8TE99 480 aa10.04□□□□□ -0.8
TNFRSF9-204ENST00000615230 AGAP3Q96P47 875 aa10.04□□□□□ -0.8
TNFRSF9-204ENST00000615230 RNF186Q9NXI6 227 aa10.04□□□□□ -0.8
TNFRSF9-204ENST00000615230 MAPRE3Q9UPY8 281 aa10.04□□□□□ -0.8
TNFRSF9-204ENST00000615230 EIF3LQ9Y262 564 aaKnown RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms