RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 PLD1Q13393 1074 aa11.24□□□□□ -0.61
FAM3A-221ENST00000612856 POM121L1PQ3SYA9 428 aa11.24□□□□□ -0.61
FAM3A-221ENST00000612856 ZNF618Q5T7W0 954 aa11.24□□□□□ -0.61
FAM3A-221ENST00000612856 TMCO4Q5TGY1 634 aa11.24□□□□□ -0.61
FAM3A-221ENST00000612856 MEI1Q5TIA1 1274 aa11.24□□□□□ -0.61
FAM3A-221ENST00000612856 STK32AQ8WU08 396 aa11.24□□□□□ -0.61
FAM3A-221ENST00000612856 C12orf42Q96LP6 360 aa11.24□□□□□ -0.61
FAM3A-221ENST00000612856 CENPKQ9BS16 269 aa11.24□□□□□ -0.61
FAM3A-221ENST00000612856 MKNK1Q9BUB5 465 aa11.24□□□□□ -0.61
FAM3A-221ENST00000612856 AJAP1Q9UKB5 411 aaPredicted RBP11.24□□□□□ -0.61
FAM3A-221ENST00000612856 A8MX80 341 aa11.24□□□□□ -0.61
FAM3A-221ENST00000612856 CST8O60676 142 aa11.24□□□□□ -0.61
FAM3A-221ENST00000612856 AGTP01019 485 aa11.24□□□□□ -0.61
FAM3A-221ENST00000612856 HOXD13P35453 343 aa11.24□□□□□ -0.61
FAM3A-221ENST00000612856 CSE1LP55060 971 aaKnown RBP11.24□□□□□ -0.61
FAM3A-221ENST00000612856 SLC12A1Q13621 1099 aa11.24□□□□□ -0.61
FAM3A-221ENST00000612856 LDLRAD1Q5T700 205 aa11.24□□□□□ -0.61
FAM3A-221ENST00000612856 CROCCP2Q86T23 111 aa11.24□□□□□ -0.61
FAM3A-221ENST00000612856 RNF135Q8IUD6 432 aa11.24□□□□□ -0.61
FAM3A-221ENST00000612856 TMEM130Q8N3G9 435 aa11.24□□□□□ -0.61
FAM3A-221ENST00000612856 GALNT15Q8N3T1 639 aa11.24□□□□□ -0.61
FAM3A-221ENST00000612856 MREGQ8N565 214 aa11.24□□□□□ -0.61
FAM3A-221ENST00000612856 SCG3Q8WXD2 468 aaKnown RBP11.24□□□□□ -0.61
FAM3A-221ENST00000612856 TTYH3Q9C0H2 523 aa11.24□□□□□ -0.61
FAM3A-221ENST00000612856 LRRC4CQ9HCJ2 640 aa11.24□□□□□ -0.61
FAM3A-221ENST00000612856 AAASQ9NRG9 546 aa11.24□□□□□ -0.61
FAM3A-221ENST00000612856 DDX18Q9NVP1 670 aaKnown RBP11.24□□□□□ -0.61
FAM3A-221ENST00000612856 LAMB1P07942 1786 aa11.24□□□□□ -0.61
FAM3A-221ENST00000612856 MYH7BA7E2Y1 1941 aa11.24□□□□□ -0.61
FAM3A-221ENST00000612856 NOL4O94818 638 aa11.24□□□□□ -0.61
FAM3A-221ENST00000612856 PMLP29590 882 aa11.24□□□□□ -0.61
FAM3A-221ENST00000612856 ATICP31939 592 aa11.24□□□□□ -0.61
FAM3A-221ENST00000612856 OVGP1Q12889 678 aa11.24□□□□□ -0.61
FAM3A-221ENST00000612856 NOL9Q5SY16 702 aaKnown RBP11.24□□□□□ -0.61
FAM3A-221ENST00000612856 HEATR6Q6AI08 1181 aaKnown RBP11.24□□□□□ -0.61
FAM3A-221ENST00000612856 DDI1Q8WTU0 396 aa11.24□□□□□ -0.61
FAM3A-221ENST00000612856 ASIC4Q96FT7 647 aa11.24□□□□□ -0.61
FAM3A-221ENST00000612856 NPHS2Q9NP85 383 aa11.24□□□□□ -0.61
FAM3A-221ENST00000612856 IPPQ9Y573 584 aa11.24□□□□□ -0.61
FAM3A-221ENST00000612856 TTC28Q96AY4 2481 aa11.23□□□□□ -0.61
FAM3A-221ENST00000612856 GIPC1O14908 333 aa11.23□□□□□ -0.61
FAM3A-221ENST00000612856 ESRRAP11474 423 aaPredicted RBP11.23□□□□□ -0.61
FAM3A-221ENST00000612856 NNMTP40261 264 aa11.23□□□□□ -0.61
FAM3A-221ENST00000612856 AP3M2P53677 418 aa11.23□□□□□ -0.61
FAM3A-221ENST00000612856 ARHGAP1Q07960 439 aa11.23□□□□□ -0.61
FAM3A-221ENST00000612856 ZCWPW2Q504Y3 356 aa11.23□□□□□ -0.61
FAM3A-221ENST00000612856 ZNF280DQ6N043 979 aa11.23□□□□□ -0.61
FAM3A-221ENST00000612856 ENOSF1Q7L5Y1 443 aa11.23□□□□□ -0.61
FAM3A-221ENST00000612856 C4orf33Q8N1A6 199 aa11.23□□□□□ -0.61
FAM3A-221ENST00000612856 TMEM199Q8N511 208 aa11.23□□□□□ -0.61
FAM3A-221ENST00000612856 SLC25A41Q8N5S1 370 aa11.23□□□□□ -0.61
FAM3A-221ENST00000612856 DRAXINQ8NBI3 349 aaPredicted RBP11.23□□□□□ -0.61
FAM3A-221ENST00000612856 SLAIN1Q8ND83 568 aa11.23□□□□□ -0.61
FAM3A-221ENST00000612856 C9orf72Q96LT7 481 aa11.23□□□□□ -0.61
FAM3A-221ENST00000612856 ACO2Q99798 780 aaKnown RBP11.23□□□□□ -0.61
FAM3A-221ENST00000612856 ERP44Q9BS26 406 aa11.23□□□□□ -0.61
FAM3A-221ENST00000612856 HSPA1AP0DMV8 641 aaKnown RBP11.23□□□□□ -0.61
FAM3A-221ENST00000612856 HSPA1BP0DMV9 641 aaKnown RBP11.23□□□□□ -0.61
FAM3A-221ENST00000612856 TROVE2P10155 538 aaKnown RBP eCLIP11.23□□□□□ -0.61
FAM3A-221ENST00000612856 DARSP14868 501 aaKnown RBP11.23□□□□□ -0.61
FAM3A-221ENST00000612856 RIPK1Q13546 671 aa11.23□□□□□ -0.61
FAM3A-221ENST00000612856 P3H1Q32P28 736 aa11.23□□□□□ -0.61
FAM3A-221ENST00000612856 GDF6Q6KF10 455 aaPredicted RBP11.23□□□□□ -0.61
FAM3A-221ENST00000612856 ELMSAN1Q6PJG2 1045 aa11.23□□□□□ -0.61
FAM3A-221ENST00000612856 EPM2AIP1Q7L775 607 aaPredicted RBP11.23□□□□□ -0.61
FAM3A-221ENST00000612856 LCA5Q86VQ0 697 aa11.23□□□□□ -0.61
FAM3A-221ENST00000612856 JAMLQ86YT9 394 aa11.23□□□□□ -0.61
FAM3A-221ENST00000612856 ANKMY2Q8IV38 441 aa11.23□□□□□ -0.61
FAM3A-221ENST00000612856 BRSK2Q8IWQ3 736 aa11.23□□□□□ -0.61
FAM3A-221ENST00000612856 TRIM42Q8IWZ5 723 aa11.23□□□□□ -0.61
FAM3A-221ENST00000612856 TMEM176AQ96HP8 235 aa11.23□□□□□ -0.61
FAM3A-221ENST00000612856 CORO1BQ9BR76 489 aa11.23□□□□□ -0.61
FAM3A-221ENST00000612856 PREBQ9HCU5 417 aa11.23□□□□□ -0.61
FAM3A-221ENST00000612856 PFDN4Q9NQP4 134 aa11.23□□□□□ -0.61
FAM3A-221ENST00000612856 TAS2R14Q9NYV8 317 aa11.23□□□□□ -0.61
FAM3A-221ENST00000612856 AFF4Q9UHB7 1163 aaKnown RBP11.23□□□□□ -0.61
FAM3A-221ENST00000612856 NFASCO94856 1347 aa11.23□□□□□ -0.61
FAM3A-221ENST00000612856 UMODL1Q5DID0 1318 aa11.23□□□□□ -0.61
FAM3A-221ENST00000612856 RPTORQ8N122 1335 aa11.23□□□□□ -0.61
FAM3A-221ENST00000612856 KCNN4O15554 427 aa11.23□□□□□ -0.61
FAM3A-221ENST00000612856 PMPCBO75439 489 aa11.23□□□□□ -0.61
FAM3A-221ENST00000612856 VHLP40337 213 aa11.23□□□□□ -0.61
FAM3A-221ENST00000612856 MCL1Q07820 350 aa11.23□□□□□ -0.61
FAM3A-221ENST00000612856 ZNF235Q14590 738 aa11.23□□□□□ -0.61
FAM3A-221ENST00000612856 PLPPR4Q7Z2D5 763 aa11.23□□□□□ -0.61
FAM3A-221ENST00000612856 RHOT1Q8IXI2 618 aa11.23□□□□□ -0.61
FAM3A-221ENST00000612856 ST13P4Q8IZP2 240 aaPredicted RBP11.23□□□□□ -0.61
FAM3A-221ENST00000612856 RXFP1Q9HBX9 757 aa11.23□□□□□ -0.61
FAM3A-221ENST00000612856 ZNF112Q9UJU3 913 aa11.23□□□□□ -0.61
FAM3A-221ENST00000612856 PCDHA2Q9Y5H9 948 aa11.23□□□□□ -0.61
FAM3A-221ENST00000612856 MROH7Q68CQ1 1323 aa11.23□□□□□ -0.61
FAM3A-221ENST00000612856 TJP3O95049 919 aa11.22□□□□□ -0.61
FAM3A-221ENST00000612856 SERPINB6P35237 376 aa11.22□□□□□ -0.61
FAM3A-221ENST00000612856 CCNFP41002 786 aa11.22□□□□□ -0.61
FAM3A-221ENST00000612856 DUSP4Q13115 394 aa11.22□□□□□ -0.61
FAM3A-221ENST00000612856 TRIM60Q495X7 471 aa11.22□□□□□ -0.61
FAM3A-221ENST00000612856 NOMO2Q5JPE7 1267 aa11.22□□□□□ -0.61
FAM3A-221ENST00000612856 TDRD10Q5VZ19 366 aaKnown RBP11.22□□□□□ -0.61
FAM3A-221ENST00000612856 AADACL2Q6P093 401 aa11.22□□□□□ -0.61
FAM3A-221ENST00000612856 CCDC137Q6PK04 289 aaKnown RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms