RNA–Protein interactions for RNA: ENST00000612045.4

CBWD1-220, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-220ENST00000612045 SLCO2A1Q92959 643 aa12.82□□□□□ -0.36
CBWD1-220ENST00000612045 PGAP3Q96FM1 320 aaPredicted RBP12.82□□□□□ -0.36
CBWD1-220ENST00000612045 FAM118BQ9BPY3 351 aa12.82□□□□□ -0.36
CBWD1-220ENST00000612045 ERP44Q9BS26 406 aa12.82□□□□□ -0.36
CBWD1-220ENST00000612045 TRIM62Q9BVG3 475 aa12.82□□□□□ -0.36
CBWD1-220ENST00000612045 RAB17Q9H0T7 212 aa12.82□□□□□ -0.36
CBWD1-220ENST00000612045 CRISPLD1Q9H336 500 aa12.82□□□□□ -0.36
CBWD1-220ENST00000612045 COX16Q9P0S2 106 aa12.82□□□□□ -0.36
CBWD1-220ENST00000612045 RASAL2Q9UJF2 1139 aa12.82□□□□□ -0.36
CBWD1-220ENST00000612045 SLC27A5Q9Y2P5 690 aa12.82□□□□□ -0.36
CBWD1-220ENST00000612045 CARNS1A5YM72 827 aa12.81□□□□□ -0.36
CBWD1-220ENST00000612045 ADAM12O43184 909 aa12.81□□□□□ -0.36
CBWD1-220ENST00000612045 GJB5O95377 273 aa12.81□□□□□ -0.36
CBWD1-220ENST00000612045 ECEL1O95672 775 aa12.81□□□□□ -0.36
CBWD1-220ENST00000612045 IL4RP24394 825 aa12.81□□□□□ -0.36
CBWD1-220ENST00000612045 DEUP1Q05D60 604 aa12.81□□□□□ -0.36
CBWD1-220ENST00000612045 MMRN1Q13201 1228 aa12.81□□□□□ -0.36
CBWD1-220ENST00000612045 NME3Q13232 169 aa12.81□□□□□ -0.36
CBWD1-220ENST00000612045 CUL1Q13616 776 aa12.81□□□□□ -0.36
CBWD1-220ENST00000612045 DPYSL2Q16555 572 aa12.81□□□□□ -0.36
CBWD1-220ENST00000612045 VSIG1Q86XK7 387 aa12.81□□□□□ -0.36
CBWD1-220ENST00000612045 RFX6Q8HWS3 928 aa12.81□□□□□ -0.36
CBWD1-220ENST00000612045 C7orf61Q8IZ16 206 aa12.81□□□□□ -0.36
CBWD1-220ENST00000612045 ATL2Q8NHH9 583 aa12.81□□□□□ -0.36
CBWD1-220ENST00000612045 ADAM32Q8TC27 787 aa12.81□□□□□ -0.36
CBWD1-220ENST00000612045 MAK16Q9BXY0 300 aaKnown RBP12.81□□□□□ -0.36
CBWD1-220ENST00000612045 PCDH18Q9HCL0 1135 aa12.81□□□□□ -0.36
CBWD1-220ENST00000612045 PIGVQ9NUD9 493 aa12.81□□□□□ -0.36
CBWD1-220ENST00000612045 SPG21Q9NZD8 308 aa12.81□□□□□ -0.36
CBWD1-220ENST00000612045 FEZ2Q9UHY8 353 aaPredicted RBP12.81□□□□□ -0.36
CBWD1-220ENST00000612045 AP4E1Q9UPM8 1137 aa12.81□□□□□ -0.36
CBWD1-220ENST00000612045 COL4A4P53420 1690 aaPredicted RBP12.81□□□□□ -0.36
CBWD1-220ENST00000612045 WDR27A2RRH5 827 aa12.81□□□□□ -0.36
CBWD1-220ENST00000612045 C2CD2LO14523 706 aa12.81□□□□□ -0.36
CBWD1-220ENST00000612045 DAPK3O43293 454 aa12.81□□□□□ -0.36
CBWD1-220ENST00000612045 LIASO43766 372 aa12.81□□□□□ -0.36
CBWD1-220ENST00000612045 SOAT2O75908 522 aa12.81□□□□□ -0.36
CBWD1-220ENST00000612045 RPL17P18621 184 aaKnown RBP12.81□□□□□ -0.36
CBWD1-220ENST00000612045 L1CAMP32004 1257 aa12.81□□□□□ -0.36
CBWD1-220ENST00000612045 OR1D2P34982 312 aa12.81□□□□□ -0.36
CBWD1-220ENST00000612045 EPHB4P54760 987 aa12.81□□□□□ -0.36
CBWD1-220ENST00000612045 YWHAGP61981 247 aaKnown RBP eCLIP12.81□□□□□ -0.36
CBWD1-220ENST00000612045 DYNLT1P63172 113 aa12.81□□□□□ -0.36
CBWD1-220ENST00000612045 HTRA4P83105 476 aaPredicted RBP12.81□□□□□ -0.36
CBWD1-220ENST00000612045 ROR1Q01973 937 aa12.81□□□□□ -0.36
CBWD1-220ENST00000612045 DSG1Q02413 1049 aa12.81□□□□□ -0.36
CBWD1-220ENST00000612045 DUSP4Q13115 394 aa12.81□□□□□ -0.36
CBWD1-220ENST00000612045 MGAT5BQ3V5L5 792 aa12.81□□□□□ -0.36
CBWD1-220ENST00000612045 PPP6R3Q5H9R7 873 aaPredicted RBP12.81□□□□□ -0.36
CBWD1-220ENST00000612045 TMEM240Q5SV17 173 aa12.81□□□□□ -0.36
CBWD1-220ENST00000612045 DUPD1Q68J44 220 aa12.81□□□□□ -0.36
CBWD1-220ENST00000612045 DRICH1Q6PGQ1 229 aaPredicted RBP12.81□□□□□ -0.36
CBWD1-220ENST00000612045 DDX42Q86XP3 938 aaKnown RBP eCLIP12.81□□□□□ -0.36
CBWD1-220ENST00000612045 PSTKQ8IV42 348 aaKnown RBP12.81□□□□□ -0.36
CBWD1-220ENST00000612045 STKLD1Q8NE28 680 aa12.81□□□□□ -0.36
CBWD1-220ENST00000612045 AENQ8WTP8 325 aaKnown RBP12.81□□□□□ -0.36
CBWD1-220ENST00000612045 GRK7Q8WTQ7 553 aa12.81□□□□□ -0.36
CBWD1-220ENST00000612045 HAUS1Q96CS2 278 aa12.81□□□□□ -0.36
CBWD1-220ENST00000612045 RNF157Q96PX1 679 aa12.81□□□□□ -0.36
CBWD1-220ENST00000612045 SEPT5Q99719 369 aaPredicted RBP12.81□□□□□ -0.36
CBWD1-220ENST00000612045 ZNF670Q9BS34 389 aa12.81□□□□□ -0.36
CBWD1-220ENST00000612045 HERC2P3Q9BVR0 1158 aa12.81□□□□□ -0.36
CBWD1-220ENST00000612045 FBXO44Q9H4M3 255 aa12.81□□□□□ -0.36
CBWD1-220ENST00000612045 DHX35Q9H5Z1 703 aaKnown RBP12.81□□□□□ -0.36
CBWD1-220ENST00000612045 WDR6Q9NNW5 1121 aaKnown RBP12.81□□□□□ -0.36
CBWD1-220ENST00000612045 ABCC13Q9NSE7 274 aa12.81□□□□□ -0.36
CBWD1-220ENST00000612045 MTMR10Q9NXD2 777 aa12.81□□□□□ -0.36
CBWD1-220ENST00000612045 CXXC1Q9P0U4 656 aaPredicted RBP12.81□□□□□ -0.36
CBWD1-220ENST00000612045 DNPEPQ9ULA0 475 aa12.81□□□□□ -0.36
CBWD1-220ENST00000612045 FZD10Q9ULW2 581 aa12.81□□□□□ -0.36
CBWD1-220ENST00000612045 NFU1Q9UMS0 254 aa12.81□□□□□ -0.36
CBWD1-220ENST00000612045 SCML2Q9UQR0 700 aa12.81□□□□□ -0.36
CBWD1-220ENST00000612045 ZNF487B1APH4 448 aa12.8□□□□□ -0.36
CBWD1-220ENST00000612045 HAPLN1P10915 354 aaPredicted RBP12.8□□□□□ -0.36
CBWD1-220ENST00000612045 GLUD2P49448 558 aa12.8□□□□□ -0.36
CBWD1-220ENST00000612045 PGFP49763 221 aa12.8□□□□□ -0.36
CBWD1-220ENST00000612045 USP46P62068 366 aa12.8□□□□□ -0.36
CBWD1-220ENST00000612045 BYSLQ13895 437 aaKnown RBP12.8□□□□□ -0.36
CBWD1-220ENST00000612045 TFDP2Q14188 446 aa12.8□□□□□ -0.36
CBWD1-220ENST00000612045 ANKRD20A8PQ5CZ79 823 aa12.8□□□□□ -0.36
CBWD1-220ENST00000612045 PSRC1Q6PGN9 363 aaPredicted RBP12.8□□□□□ -0.36
CBWD1-220ENST00000612045 DENND5BQ6ZUT9 1274 aa12.8□□□□□ -0.36
CBWD1-220ENST00000612045 SCD5Q86SK9 330 aa12.8□□□□□ -0.36
CBWD1-220ENST00000612045 DDX53Q86TM3 631 aaKnown RBP12.8□□□□□ -0.36
CBWD1-220ENST00000612045 EIF1ADQ8N9N8 165 aaKnown RBP12.8□□□□□ -0.36
CBWD1-220ENST00000612045 TTC13Q8NBP0 860 aa12.8□□□□□ -0.36
CBWD1-220ENST00000612045 GPR152Q8TDT2 470 aa12.8□□□□□ -0.36
CBWD1-220ENST00000612045 FAF2Q96CS3 445 aa12.8□□□□□ -0.36
CBWD1-220ENST00000612045 SPATA17Q96L03 361 aa12.8□□□□□ -0.36
CBWD1-220ENST00000612045 CCDC114Q96M63 670 aa12.8□□□□□ -0.36
CBWD1-220ENST00000612045 KCTD15Q96SI1 283 aaPredicted RBP12.8□□□□□ -0.36
CBWD1-220ENST00000612045 SLC9A7Q96T83 725 aa12.8□□□□□ -0.36
CBWD1-220ENST00000612045 CLSTN3Q9BQT9 956 aa12.8□□□□□ -0.36
CBWD1-220ENST00000612045 FRMD8P1Q9BZ68 369 aaPredicted RBP12.8□□□□□ -0.36
CBWD1-220ENST00000612045 MAGEB5Q9BZ81 275 aa12.8□□□□□ -0.36
CBWD1-220ENST00000612045 TRIM31Q9BZY9 425 aa12.8□□□□□ -0.36
CBWD1-220ENST00000612045 DPH5Q9H2P9 285 aa12.8□□□□□ -0.36
CBWD1-220ENST00000612045 FAM204AQ9H8W3 233 aa12.8□□□□□ -0.36
CBWD1-220ENST00000612045 FAM114A2Q9NRY5 505 aa12.8□□□□□ -0.36
CBWD1-220ENST00000612045 DDIT4Q9NX09 232 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms