RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 DDX3XO00571 662 aaKnown RBP eCLIP9.27□□□□□ -0.93
SMAD4-217ENST00000611848 NRG2O14511 850 aaPredicted RBP9.27□□□□□ -0.93
SMAD4-217ENST00000611848 XPO1O14980 1071 aaKnown RBP9.27□□□□□ -0.93
SMAD4-217ENST00000611848 PALMO75781 387 aa9.27□□□□□ -0.93
SMAD4-217ENST00000611848 SETSIPP0DME0 302 aa9.27□□□□□ -0.93
SMAD4-217ENST00000611848 ALADP13716 330 aa9.27□□□□□ -0.93
SMAD4-217ENST00000611848 GNA15P30679 374 aa9.27□□□□□ -0.93
SMAD4-217ENST00000611848 USP8P40818 1118 aa9.27□□□□□ -0.93
SMAD4-217ENST00000611848 PDE6CP51160 858 aa9.27□□□□□ -0.93
SMAD4-217ENST00000611848 CYP4F8P98187 520 aa9.27□□□□□ -0.93
SMAD4-217ENST00000611848 TAF10Q12962 218 aa9.27□□□□□ -0.93
SMAD4-217ENST00000611848 DRAP1Q14919 205 aaPredicted RBP9.27□□□□□ -0.93
SMAD4-217ENST00000611848 GOLGA7BQ2TAP0 167 aa9.27□□□□□ -0.93
SMAD4-217ENST00000611848 FAM78AQ5JUQ0 283 aa9.27□□□□□ -0.93
SMAD4-217ENST00000611848 ALKBH5Q6P6C2 394 aaKnown RBP9.27□□□□□ -0.93
SMAD4-217ENST00000611848 PARM1Q6UWI2 310 aa9.27□□□□□ -0.93
SMAD4-217ENST00000611848 HDXQ7Z353 690 aa9.27□□□□□ -0.93
SMAD4-217ENST00000611848 VPS36Q86VN1 386 aa9.27□□□□□ -0.93
SMAD4-217ENST00000611848 MON1AQ86VX9 555 aa9.27□□□□□ -0.93
SMAD4-217ENST00000611848 TTC30AQ86WT1 665 aa9.27□□□□□ -0.93
SMAD4-217ENST00000611848 SPATA4Q8NEY3 305 aa9.27□□□□□ -0.93
SMAD4-217ENST00000611848 SCAMP5Q8TAC9 235 aa9.27□□□□□ -0.93
SMAD4-217ENST00000611848 ZSCAN18Q8TBC5 510 aaPredicted RBP9.27□□□□□ -0.93
SMAD4-217ENST00000611848 ZNF606Q8WXB4 792 aa9.27□□□□□ -0.93
SMAD4-217ENST00000611848 TFAP2BQ92481 460 aa9.27□□□□□ -0.93
SMAD4-217ENST00000611848 FBXO32Q969P5 355 aa9.27□□□□□ -0.93
SMAD4-217ENST00000611848 ELSPBP1Q96BH3 223 aa9.27□□□□□ -0.93
SMAD4-217ENST00000611848 ZSWIM3Q96MP5 696 aa9.27□□□□□ -0.93
SMAD4-217ENST00000611848 TRPV4Q9HBA0 871 aa9.27□□□□□ -0.93
SMAD4-217ENST00000611848 ZFP14Q9HCL3 533 aa9.27□□□□□ -0.93
SMAD4-217ENST00000611848 MUTYHQ9UIF7 546 aa9.27□□□□□ -0.93
SMAD4-217ENST00000611848 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.27□□□□□ -0.93
SMAD4-217ENST00000611848 NCANO14594 1321 aa9.26□□□□□ -0.93
SMAD4-217ENST00000611848 MYO16Q9Y6X6 1858 aa9.26□□□□□ -0.93
SMAD4-217ENST00000611848 GRID2IPA4D2P6 1211 aa9.26□□□□□ -0.93
SMAD4-217ENST00000611848 ZNF840PA6NDX5 716 aa9.26□□□□□ -0.93
SMAD4-217ENST00000611848 CES2O00748 559 aa9.26□□□□□ -0.93
SMAD4-217ENST00000611848 DCXO43602 365 aa9.26□□□□□ -0.93
SMAD4-217ENST00000611848 ECI2O75521 394 aa9.26□□□□□ -0.93
SMAD4-217ENST00000611848 ASGR2P07307 311 aa9.26□□□□□ -0.93
SMAD4-217ENST00000611848 ZDHHC11BP0C7U3 371 aa9.26□□□□□ -0.93
SMAD4-217ENST00000611848 CCDC172P0C7W6 258 aa9.26□□□□□ -0.93
SMAD4-217ENST00000611848 BRD2P25440 801 aaKnown RBP9.26□□□□□ -0.93
SMAD4-217ENST00000611848 AVPR1AP37288 418 aa9.26□□□□□ -0.93
SMAD4-217ENST00000611848 FAM193AP78312 1265 aa9.26□□□□□ -0.93
SMAD4-217ENST00000611848 PDE4CQ08493 712 aa9.26□□□□□ -0.93
SMAD4-217ENST00000611848 IFRD2Q12894 506 aaPredicted RBP9.26□□□□□ -0.93
SMAD4-217ENST00000611848 TDGQ13569 410 aa9.26□□□□□ -0.93
SMAD4-217ENST00000611848 IFI16Q16666 785 aaKnown RBP9.26□□□□□ -0.93
SMAD4-217ENST00000611848 PKDCCQ504Y2 493 aa9.26□□□□□ -0.93
SMAD4-217ENST00000611848 RAB41Q5JT25 222 aa9.26□□□□□ -0.93
SMAD4-217ENST00000611848 STXBP5Q5T5C0 1151 aa9.26□□□□□ -0.93
SMAD4-217ENST00000611848 SNX30Q5VWJ9 437 aa9.26□□□□□ -0.93
SMAD4-217ENST00000611848 TXNDC8Q6A555 127 aa9.26□□□□□ -0.93
SMAD4-217ENST00000611848 PIGZQ86VD9 579 aa9.26□□□□□ -0.93
SMAD4-217ENST00000611848 ARID3BQ8IVW6 561 aaPredicted RBP9.26□□□□□ -0.93
SMAD4-217ENST00000611848 UBALD2Q8IYN6 164 aa9.26□□□□□ -0.93
SMAD4-217ENST00000611848 FAM71AQ8IYT1 594 aa9.26□□□□□ -0.93
SMAD4-217ENST00000611848 CMTM8Q8IZV2 173 aa9.26□□□□□ -0.93
SMAD4-217ENST00000611848 MAB21L3Q8N8X9 362 aa9.26□□□□□ -0.93
SMAD4-217ENST00000611848 LRRC57Q8N9N7 239 aa9.26□□□□□ -0.93
SMAD4-217ENST00000611848 KCTD13Q8WZ19 329 aa9.26□□□□□ -0.93
SMAD4-217ENST00000611848 FGF14Q92915 247 aa9.26□□□□□ -0.93
SMAD4-217ENST00000611848 HSFY1Q96LI6 401 aa9.26□□□□□ -0.93
SMAD4-217ENST00000611848 ZSWIM1Q9BR11 485 aa9.26□□□□□ -0.93
SMAD4-217ENST00000611848 SLC46A2Q9BY10 475 aa9.26□□□□□ -0.93
SMAD4-217ENST00000611848 OBP2AQ9NY56 170 aa9.26□□□□□ -0.93
SMAD4-217ENST00000611848 SCML2Q9UQR0 700 aa9.26□□□□□ -0.93
SMAD4-217ENST00000611848 USP3Q9Y6I4 520 aa9.26□□□□□ -0.93
SMAD4-217ENST00000611848 NUMBLQ9Y6R0 609 aa9.26□□□□□ -0.93
SMAD4-217ENST00000611848 F5P12259 2224 aa9.25□□□□□ -0.93
SMAD4-217ENST00000611848 MUC3AQ02505 3323 aa9.25□□□□□ -0.93
SMAD4-217ENST00000611848 TRAV19A0A0A6YYK7 116 aa9.25□□□□□ -0.93
SMAD4-217ENST00000611848 PI4K2BG5E9Z4 385 aa9.25□□□□□ -0.93
SMAD4-217ENST00000611848 M0QYV0 167 aa9.25□□□□□ -0.93
SMAD4-217ENST00000611848 DLL1O00548 723 aa9.25□□□□□ -0.93
SMAD4-217ENST00000611848 DPYSL4O14531 572 aa9.25□□□□□ -0.93
SMAD4-217ENST00000611848 CYP26A1O43174 497 aa9.25□□□□□ -0.93
SMAD4-217ENST00000611848 THAP12O43422 761 aa9.25□□□□□ -0.93
SMAD4-217ENST00000611848 H2AFZP0C0S5 128 aa9.25□□□□□ -0.93
SMAD4-217ENST00000611848 TUBP50607 506 aa9.25□□□□□ -0.93
SMAD4-217ENST00000611848 NAP1L1P55209 391 aaKnown RBP9.25□□□□□ -0.93
SMAD4-217ENST00000611848 C2orf54Q08AI8 447 aa9.25□□□□□ -0.93
SMAD4-217ENST00000611848 TANGO2Q6ICL3 276 aa9.25□□□□□ -0.93
SMAD4-217ENST00000611848 H2AFVQ71UI9 128 aa9.25□□□□□ -0.93
SMAD4-217ENST00000611848 GPRIN1Q7Z2K8 1008 aa9.25□□□□□ -0.93
SMAD4-217ENST00000611848 SLFN11Q7Z7L1 901 aa9.25□□□□□ -0.93
SMAD4-217ENST00000611848 SLC44A3Q8N4M1 653 aa9.25□□□□□ -0.93
SMAD4-217ENST00000611848 UBA3Q8TBC4 463 aa9.25□□□□□ -0.93
SMAD4-217ENST00000611848 DEPDC1BQ8WUY9 529 aa9.25□□□□□ -0.93
SMAD4-217ENST00000611848 SLC35F5Q8WV83 523 aa9.25□□□□□ -0.93
SMAD4-217ENST00000611848 RSAD2Q8WXG1 361 aa9.25□□□□□ -0.93
SMAD4-217ENST00000611848 LRRC4Q9HBW1 653 aa9.25□□□□□ -0.93
SMAD4-217ENST00000611848 TLR8Q9NR97 1041 aaKnown RBP9.25□□□□□ -0.93
SMAD4-217ENST00000611848 CHORDC1Q9UHD1 332 aaPredicted RBP9.25□□□□□ -0.93
SMAD4-217ENST00000611848 DUSP12Q9UNI6 340 aa9.25□□□□□ -0.93
SMAD4-217ENST00000611848 ARIH1Q9Y4X5 557 aaPredicted RBP9.25□□□□□ -0.93
SMAD4-217ENST00000611848 TECTAO75443 2155 aa9.24□□□□□ -0.93
SMAD4-217ENST00000611848 CALCAP01258 141 aa9.24□□□□□ -0.93
SMAD4-217ENST00000611848 USP17L7P0C7H9 530 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms