RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 MAP1SQ66K74 1059 aaPredicted RBP21.15■□□□□ 0.98
SSBP3-216ENST00000610401 TMPRSS6Q8IU80 811 aa21.15■□□□□ 0.98
SSBP3-216ENST00000610401 WDR49Q8IV35 697 aa21.15■□□□□ 0.98
SSBP3-216ENST00000610401 ADAM32Q8TC27 787 aa21.15■□□□□ 0.98
SSBP3-216ENST00000610401 AGAP3Q96P47 875 aa21.15■□□□□ 0.98
SSBP3-216ENST00000610401 PCYT2Q99447 389 aa21.15■□□□□ 0.98
SSBP3-216ENST00000610401 OXCT2Q9BYC2 517 aaPredicted RBP21.15■□□□□ 0.98
SSBP3-216ENST00000610401 ADGRA2Q96PE1 1338 aa21.15■□□□□ 0.98
SSBP3-216ENST00000610401 NEMP1O14524 444 aa21.14■□□□□ 0.98
SSBP3-216ENST00000610401 MSCO60682 206 aa21.14■□□□□ 0.98
SSBP3-216ENST00000610401 SNUPNO95149 360 aaKnown RBP21.14■□□□□ 0.98
SSBP3-216ENST00000610401 PGM3O95394 542 aa21.14■□□□□ 0.98
SSBP3-216ENST00000610401 SLC18A1P54219 525 aa21.14■□□□□ 0.98
SSBP3-216ENST00000610401 BACE1P56817 501 aa21.14■□□□□ 0.98
SSBP3-216ENST00000610401 PTPN11Q06124 597 aaPredicted RBP21.14■□□□□ 0.98
SSBP3-216ENST00000610401 USP4Q13107 963 aa21.14■□□□□ 0.98
SSBP3-216ENST00000610401 GJC2Q5T442 439 aaPredicted RBP21.14■□□□□ 0.98
SSBP3-216ENST00000610401 FAM183BPQ6ZVS7 135 aa21.14■□□□□ 0.98
SSBP3-216ENST00000610401 NDRG1Q92597 394 aaKnown RBP21.14■□□□□ 0.98
SSBP3-216ENST00000610401 MYOCOSA0A1B0GUC4 107 aa21.14■□□□□ 0.97
SSBP3-216ENST00000610401 E9PBE3 544 aa21.14■□□□□ 0.97
SSBP3-216ENST00000610401 GOLGA8TH3BQL2 631 aa21.14■□□□□ 0.97
SSBP3-216ENST00000610401 LIN7AO14910 233 aaPredicted RBP21.14■□□□□ 0.97
SSBP3-216ENST00000610401 OGTO15294 1046 aa21.14■□□□□ 0.97
SSBP3-216ENST00000610401 KLHL41O60662 606 aa21.14■□□□□ 0.97
SSBP3-216ENST00000610401 RNASEH1O60930 286 aaKnown RBP21.14■□□□□ 0.97
SSBP3-216ENST00000610401 LSM8O95777 96 aaKnown RBP21.14■□□□□ 0.97
SSBP3-216ENST00000610401 LYNP07948 512 aa21.14■□□□□ 0.97
SSBP3-216ENST00000610401 HOXC6P09630 235 aa21.14■□□□□ 0.97
SSBP3-216ENST00000610401 PLD5Q8N7P1 536 aa21.14■□□□□ 0.97
SSBP3-216ENST00000610401 TMPRSS4Q9NRS4 437 aa21.14■□□□□ 0.97
SSBP3-216ENST00000610401 HPS6Q86YV9 775 aa21.13■□□□□ 0.97
SSBP3-216ENST00000610401 ARHGAP24Q8N264 748 aa21.13■□□□□ 0.97
SSBP3-216ENST00000610401 SLC4A11Q8NBS3 891 aa21.13■□□□□ 0.97
SSBP3-216ENST00000610401 CLEC4CQ8WTT0 213 aa21.13■□□□□ 0.97
SSBP3-216ENST00000610401 FAM172AQ8WUF8 416 aa21.13■□□□□ 0.97
SSBP3-216ENST00000610401 AZIN2Q96A70 460 aa21.13■□□□□ 0.97
SSBP3-216ENST00000610401 ACO2Q99798 780 aaKnown RBP21.13■□□□□ 0.97
SSBP3-216ENST00000610401 ACAD9Q9H845 621 aa21.13■□□□□ 0.97
SSBP3-216ENST00000610401 IFT122Q9HBG6 1241 aa21.13■□□□□ 0.97
SSBP3-216ENST00000610401 DSG1Q02413 1049 aa21.13■□□□□ 0.97
SSBP3-216ENST00000610401 N4BP2L1Q5TBK1 243 aaPredicted RBP21.13■□□□□ 0.97
SSBP3-216ENST00000610401 DPY19L2Q6NUT2 758 aa21.13■□□□□ 0.97
SSBP3-216ENST00000610401 CMC1Q7Z7K0 106 aa21.13■□□□□ 0.97
SSBP3-216ENST00000610401 C1orf127Q8N9H9 656 aa21.13■□□□□ 0.97
SSBP3-216ENST00000610401 WWP1Q9H0M0 922 aa21.13■□□□□ 0.97
SSBP3-216ENST00000610401 PLAC1Q9HBJ0 212 aa21.13■□□□□ 0.97
SSBP3-216ENST00000610401 XAB2Q9HCS7 855 aaKnown RBP21.13■□□□□ 0.97
SSBP3-216ENST00000610401 ETNK2Q9NVF9 386 aa21.13■□□□□ 0.97
SSBP3-216ENST00000610401 BTBD7Q9P203 1132 aa21.13■□□□□ 0.97
SSBP3-216ENST00000610401 TAGLN3Q9UI15 199 aa21.13■□□□□ 0.97
SSBP3-216ENST00000610401 PSAT1Q9Y617 370 aa21.13■□□□□ 0.97
SSBP3-216ENST00000610401 SPATA31C2B4DYI2 1134 aa21.13■□□□□ 0.97
SSBP3-216ENST00000610401 E7ESA3 106 aa21.13■□□□□ 0.97
SSBP3-216ENST00000610401 NOP56O00567 594 aaKnown RBP21.13■□□□□ 0.97
SSBP3-216ENST00000610401 DHRS4L1P0CG22 281 aa21.13■□□□□ 0.97
SSBP3-216ENST00000610401 CALRP27797 417 aaKnown RBP21.13■□□□□ 0.97
SSBP3-216ENST00000610401 KCNJ11Q14654 390 aa21.13■□□□□ 0.97
SSBP3-216ENST00000610401 ATG16L1Q676U5 607 aa21.13■□□□□ 0.97
SSBP3-216ENST00000610401 JADE1Q6IE81 842 aa21.13■□□□□ 0.97
SSBP3-216ENST00000610401 PYROXD2Q8N2H3 581 aa21.13■□□□□ 0.97
SSBP3-216ENST00000610401 STKLD1Q8NE28 680 aa21.13■□□□□ 0.97
SSBP3-216ENST00000610401 CNKSR2Q8WXI2 1034 aa21.13■□□□□ 0.97
SSBP3-216ENST00000610401 RSAD1Q9HA92 442 aa21.13■□□□□ 0.97
SSBP3-216ENST00000610401 POPDC2Q9HBU9 364 aa21.13■□□□□ 0.97
SSBP3-216ENST00000610401 ASNSD1Q9NWL6 643 aa21.13■□□□□ 0.97
SSBP3-216ENST00000610401 STYXL1Q9Y6J8 313 aa21.13■□□□□ 0.97
SSBP3-216ENST00000610401 RTP1P59025 263 aa21.12■□□□□ 0.97
SSBP3-216ENST00000610401 CDC16Q13042 620 aa21.12■□□□□ 0.97
SSBP3-216ENST00000610401 TRIP10Q15642 601 aa21.12■□□□□ 0.97
SSBP3-216ENST00000610401 RABGAP1LQ5R372 815 aa21.12■□□□□ 0.97
SSBP3-216ENST00000610401 SIX4Q9UIU6 781 aa21.12■□□□□ 0.97
SSBP3-216ENST00000610401 HACL1Q9UJ83 578 aa21.12■□□□□ 0.97
SSBP3-216ENST00000610401 CNTN6Q9UQ52 1028 aa21.12■□□□□ 0.97
SSBP3-216ENST00000610401 HBS1LQ9Y450 684 aaKnown RBP21.12■□□□□ 0.97
SSBP3-216ENST00000610401 ZNF831Q5JPB2 1677 aa21.12■□□□□ 0.97
SSBP3-216ENST00000610401 NFASCO94856 1347 aa21.12■□□□□ 0.97
SSBP3-216ENST00000610401 SLC15A5A6NIM6 579 aa21.12■□□□□ 0.97
SSBP3-216ENST00000610401 CFLARO15519 480 aa21.12■□□□□ 0.97
SSBP3-216ENST00000610401 DCXO43602 365 aa21.12■□□□□ 0.97
SSBP3-216ENST00000610401 OR6B1O95007 311 aa21.12■□□□□ 0.97
SSBP3-216ENST00000610401 DPEP1P16444 411 aa21.12■□□□□ 0.97
SSBP3-216ENST00000610401 PEX2P28328 305 aa21.12■□□□□ 0.97
SSBP3-216ENST00000610401 AP2B1P63010 937 aa21.12■□□□□ 0.97
SSBP3-216ENST00000610401 CUL3Q13618 768 aa21.12■□□□□ 0.97
SSBP3-216ENST00000610401 ATF7IP2Q5U623 682 aa21.12■□□□□ 0.97
SSBP3-216ENST00000610401 SH2D5Q6ZV89 423 aa21.12■□□□□ 0.97
SSBP3-216ENST00000610401 PCDH19Q8TAB3 1148 aa21.12■□□□□ 0.97
SSBP3-216ENST00000610401 LGMNQ99538 433 aa21.12■□□□□ 0.97
SSBP3-216ENST00000610401 KLC2Q9H0B6 622 aa21.12■□□□□ 0.97
SSBP3-216ENST00000610401 RPF1Q9H9Y2 349 aaKnown RBP21.12■□□□□ 0.97
SSBP3-216ENST00000610401 USP29Q9HBJ7 922 aa21.12■□□□□ 0.97
SSBP3-216ENST00000610401 ANGPTL2Q9UKU9 493 aa21.12■□□□□ 0.97
SSBP3-216ENST00000610401 LRRC37AA6NMS7 1700 aa21.12■□□□□ 0.97
SSBP3-216ENST00000610401 QSER1Q2KHR3 1735 aa21.12■□□□□ 0.97
SSBP3-216ENST00000610401 HMX2A2RU54 273 aa21.11■□□□□ 0.97
SSBP3-216ENST00000610401 LACTBL1A8MY62 500 aa21.11■□□□□ 0.97
SSBP3-216ENST00000610401 TBC1D12O60347 775 aa21.11■□□□□ 0.97
SSBP3-216ENST00000610401 IQCF3P0C7M6 154 aa21.11■□□□□ 0.97
SSBP3-216ENST00000610401 GSTT1P30711 240 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms