RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 XXYLT1Q8NBI6 393 aa18.32■□□□□ 0.52
CHMP4A-211ENST00000609024 WBP2Q969T9 261 aa18.32■□□□□ 0.52
CHMP4A-211ENST00000609024 CD93Q9NPY3 652 aa18.32■□□□□ 0.52
CHMP4A-211ENST00000609024 SCUBE2Q9NQ36 999 aa18.32■□□□□ 0.52
CHMP4A-211ENST00000609024 WSB2Q9NYS7 404 aaPredicted RBP18.32■□□□□ 0.52
CHMP4A-211ENST00000609024 MARK1Q9P0L2 795 aa18.32■□□□□ 0.52
CHMP4A-211ENST00000609024 STON1Q9Y6Q2 735 aa18.32■□□□□ 0.52
CHMP4A-211ENST00000609024 WASH3PC4AMC7 463 aa18.31■□□□□ 0.52
CHMP4A-211ENST00000609024 EIF3DO15371 548 aaKnown RBP eCLIP18.31■□□□□ 0.52
CHMP4A-211ENST00000609024 FLRT2O43155 660 aa18.31■□□□□ 0.52
CHMP4A-211ENST00000609024 CILPO75339 1184 aa18.31■□□□□ 0.52
CHMP4A-211ENST00000609024 STAU1O95793 577 aaKnown RBP18.31■□□□□ 0.52
CHMP4A-211ENST00000609024 ZDHHC11BP0C7U3 371 aa18.31■□□□□ 0.52
CHMP4A-211ENST00000609024 ZNF883P0CG24 379 aa18.31■□□□□ 0.52
CHMP4A-211ENST00000609024 PDCP20941 246 aa18.31■□□□□ 0.52
CHMP4A-211ENST00000609024 ZNF132P52740 706 aa18.31■□□□□ 0.52
CHMP4A-211ENST00000609024 ARID5AQ03989 594 aa18.31■□□□□ 0.52
CHMP4A-211ENST00000609024 FUT11Q495W5 492 aa18.31■□□□□ 0.52
CHMP4A-211ENST00000609024 TADA2BQ86TJ2 420 aa18.31■□□□□ 0.52
CHMP4A-211ENST00000609024 METTL3Q86U44 580 aaKnown RBP18.31■□□□□ 0.52
CHMP4A-211ENST00000609024 DNASE2BQ8WZ79 361 aa18.31■□□□□ 0.52
CHMP4A-211ENST00000609024 PRCCQ92733 491 aaPredicted RBP18.31■□□□□ 0.52
CHMP4A-211ENST00000609024 KLF16Q9BXK1 252 aaPredicted RBP18.31■□□□□ 0.52
CHMP4A-211ENST00000609024 SMYD3Q9H7B4 428 aa18.31■□□□□ 0.52
CHMP4A-211ENST00000609024 ITM2CQ9NQX7 267 aa18.31■□□□□ 0.52
CHMP4A-211ENST00000609024 AGPAT3Q9NRZ7 376 aa18.31■□□□□ 0.52
CHMP4A-211ENST00000609024 IL37Q9NZH6 218 aa18.31■□□□□ 0.52
CHMP4A-211ENST00000609024 CLIC2O15247 247 aa18.3■□□□□ 0.52
CHMP4A-211ENST00000609024 TBX18O95935 607 aa18.3■□□□□ 0.52
CHMP4A-211ENST00000609024 CDH8P55286 799 aa18.3■□□□□ 0.52
CHMP4A-211ENST00000609024 MAP3K7CLP57077 242 aa18.3■□□□□ 0.52
CHMP4A-211ENST00000609024 SNRPFP62306 86 aaKnown RBP18.3■□□□□ 0.52
CHMP4A-211ENST00000609024 ASIC1P78348 528 aa18.3■□□□□ 0.52
CHMP4A-211ENST00000609024 SCARA5Q6ZMJ2 495 aa18.3■□□□□ 0.52
CHMP4A-211ENST00000609024 TMPRSS7Q7RTY8 843 aa18.3■□□□□ 0.52
CHMP4A-211ENST00000609024 ACOT1Q86TX2 421 aa18.3■□□□□ 0.52
CHMP4A-211ENST00000609024 SNX19Q92543 992 aa18.3■□□□□ 0.52
CHMP4A-211ENST00000609024 HPS3Q969F9 1004 aa18.3■□□□□ 0.52
CHMP4A-211ENST00000609024 SIPA1Q96FS4 1042 aa18.3■□□□□ 0.52
CHMP4A-211ENST00000609024 NUP58Q9BVL2 599 aa18.3■□□□□ 0.52
CHMP4A-211ENST00000609024 TNMDQ9H2S6 317 aa18.3■□□□□ 0.52
CHMP4A-211ENST00000609024 UPF2Q9HAU5 1272 aaKnown RBP18.3■□□□□ 0.52
CHMP4A-211ENST00000609024 IL21RQ9HBE5 538 aa18.3■□□□□ 0.52
CHMP4A-211ENST00000609024 CD248Q9HCU0 757 aa18.3■□□□□ 0.52
CHMP4A-211ENST00000609024 PLK2Q9NYY3 685 aa18.3■□□□□ 0.52
CHMP4A-211ENST00000609024 FREM2Q5SZK8 3169 aa18.3■□□□□ 0.52
CHMP4A-211ENST00000609024 FAM92AA1XBS5 289 aa18.29■□□□□ 0.52
CHMP4A-211ENST00000609024 CBFA2T3O75081 653 aa18.29■□□□□ 0.52
CHMP4A-211ENST00000609024 PLA2G4AP47712 749 aa18.29■□□□□ 0.52
CHMP4A-211ENST00000609024 TEAD4Q15561 434 aa18.29■□□□□ 0.52
CHMP4A-211ENST00000609024 HLA-BQ31612 363 aa18.29■□□□□ 0.52
CHMP4A-211ENST00000609024 CCDC157Q569K6 752 aa18.29■□□□□ 0.52
CHMP4A-211ENST00000609024 TMPRSS6Q8IU80 811 aa18.29■□□□□ 0.52
CHMP4A-211ENST00000609024 GLIS3Q8NEA6 775 aa18.29■□□□□ 0.52
CHMP4A-211ENST00000609024 SLC2A14Q8TDB8 520 aa18.29■□□□□ 0.52
CHMP4A-211ENST00000609024 JAKMIP2Q96AA8 810 aa18.29■□□□□ 0.52
CHMP4A-211ENST00000609024 EIF2B4Q9UI10 523 aaKnown RBP18.29■□□□□ 0.52
CHMP4A-211ENST00000609024 DNMT3LQ9UJW3 386 aa18.29■□□□□ 0.52
CHMP4A-211ENST00000609024 PCDHGB2Q9Y5G2 931 aa18.29■□□□□ 0.52
CHMP4A-211ENST00000609024 METTL12A8MUP2 240 aa18.28■□□□□ 0.52
CHMP4A-211ENST00000609024 EXOC3O60645 756 aa18.28■□□□□ 0.52
CHMP4A-211ENST00000609024 CISD3P0C7P0 127 aa18.28■□□□□ 0.52
CHMP4A-211ENST00000609024 CCDC130P13994 396 aa18.28■□□□□ 0.52
CHMP4A-211ENST00000609024 TPMTP51580 245 aa18.28■□□□□ 0.52
CHMP4A-211ENST00000609024 AP3M2P53677 418 aa18.28■□□□□ 0.52
CHMP4A-211ENST00000609024 CYP4F3Q08477 520 aa18.28■□□□□ 0.52
CHMP4A-211ENST00000609024 FAM26FQ5R3K3 315 aa18.28■□□□□ 0.52
CHMP4A-211ENST00000609024 C10orf120Q5SQS8 335 aa18.28■□□□□ 0.52
CHMP4A-211ENST00000609024 NELFCDQ8IXH7 590 aa18.28■□□□□ 0.52
CHMP4A-211ENST00000609024 FUKQ8N0W3 1084 aa18.28■□□□□ 0.52
CHMP4A-211ENST00000609024 ZNF507Q8TCN5 953 aa18.28■□□□□ 0.52
CHMP4A-211ENST00000609024 DNAI2Q9GZS0 605 aa18.28■□□□□ 0.52
CHMP4A-211ENST00000609024 CYLDQ9NQC7 956 aa18.28■□□□□ 0.52
CHMP4A-211ENST00000609024 USP36Q9P275 1121 aaKnown RBP18.28■□□□□ 0.52
CHMP4A-211ENST00000609024 DKK4Q9UBT3 224 aa18.28■□□□□ 0.52
CHMP4A-211ENST00000609024 FNDC3AQ9Y2H6 1198 aaKnown RBP18.28■□□□□ 0.52
CHMP4A-211ENST00000609024 ZNF510Q9Y2H8 683 aa18.28■□□□□ 0.52
CHMP4A-211ENST00000609024 GCN1Q92616 2671 aaKnown RBP18.27■□□□□ 0.52
CHMP4A-211ENST00000609024 UBE4BO95155 1302 aa18.27■□□□□ 0.52
CHMP4A-211ENST00000609024 TRABD2BA6NFA1 517 aa18.27■□□□□ 0.52
CHMP4A-211ENST00000609024 CYBBP04839 570 aa18.27■□□□□ 0.52
CHMP4A-211ENST00000609024 ATXN1LP0C7T5 689 aaKnown RBP18.27■□□□□ 0.52
CHMP4A-211ENST00000609024 FAM200BP0CF97 657 aa18.27■□□□□ 0.52
CHMP4A-211ENST00000609024 RARGP13631 454 aa18.27■□□□□ 0.52
CHMP4A-211ENST00000609024 CHKAP35790 457 aa18.27■□□□□ 0.52
CHMP4A-211ENST00000609024 AFF3P51826 1226 aaKnown RBP18.27■□□□□ 0.52
CHMP4A-211ENST00000609024 NCOA4Q13772 614 aa18.27■□□□□ 0.52
CHMP4A-211ENST00000609024 PAQR9Q6ZVX9 377 aa18.27■□□□□ 0.52
CHMP4A-211ENST00000609024 CACUL1Q86Y37 369 aa18.27■□□□□ 0.52
CHMP4A-211ENST00000609024 ZNF516Q92618 1163 aa18.27■□□□□ 0.52
CHMP4A-211ENST00000609024 SMOQ99835 787 aa18.27■□□□□ 0.52
CHMP4A-211ENST00000609024 MKRN2Q9H000 416 aaKnown RBP18.27■□□□□ 0.52
CHMP4A-211ENST00000609024 XYLT2Q9H1B5 865 aa18.27■□□□□ 0.52
CHMP4A-211ENST00000609024 CGNQ9P2M7 1197 aaKnown RBP18.27■□□□□ 0.52
CHMP4A-211ENST00000609024 IGSF10Q6WRI0 2623 aa18.27■□□□□ 0.51
CHMP4A-211ENST00000609024 PLXNB3Q9ULL4 1909 aa18.27■□□□□ 0.51
CHMP4A-211ENST00000609024 ACACAQ13085 2346 aa18.27■□□□□ 0.51
CHMP4A-211ENST00000609024 LAMA5O15230 3695 aa18.27■□□□□ 0.51
CHMP4A-211ENST00000609024 MYH10P35580 1976 aa18.26■□□□□ 0.51
CHMP4A-211ENST00000609024 RALAP11233 206 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms