RNA–Protein interactions for RNA: ENST00000608858.5

CTCFL-220, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 905 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-220ENST00000608858 FAM47DPA6NHR8 397 aa9.85□□□□□ -0.83
CTCFL-220ENST00000608858 F8VP50 259 aa9.85□□□□□ -0.83
CTCFL-220ENST00000608858 MT-CO3P00414 261 aa9.85□□□□□ -0.83
CTCFL-220ENST00000608858 ITGB3P05106 788 aa9.85□□□□□ -0.83
CTCFL-220ENST00000608858 KRT19P08727 400 aa9.85□□□□□ -0.83
CTCFL-220ENST00000608858 C1SP09871 688 aa9.85□□□□□ -0.83
CTCFL-220ENST00000608858 DGKGP49619 791 aa9.85□□□□□ -0.83
CTCFL-220ENST00000608858 CACNA2D1P54289 1103 aa9.85□□□□□ -0.83
CTCFL-220ENST00000608858 C21orf59P57076 290 aa9.85□□□□□ -0.83
CTCFL-220ENST00000608858 PCBP4P57723 403 aaKnown RBP9.85□□□□□ -0.83
CTCFL-220ENST00000608858 INSM1Q01101 510 aaPredicted RBP9.85□□□□□ -0.83
CTCFL-220ENST00000608858 SHBQ15464 509 aa9.85□□□□□ -0.83
CTCFL-220ENST00000608858 CFAP221Q4G0U5 840 aa9.85□□□□□ -0.83
CTCFL-220ENST00000608858 HAUS3Q68CZ6 603 aa9.85□□□□□ -0.83
CTCFL-220ENST00000608858 ADALQ6DHV7 355 aa9.85□□□□□ -0.83
CTCFL-220ENST00000608858 FAM171BQ6P995 826 aa9.85□□□□□ -0.83
CTCFL-220ENST00000608858 HS2ST1Q7LGA3 356 aa9.85□□□□□ -0.83
CTCFL-220ENST00000608858 METTL3Q86U44 580 aaKnown RBP9.85□□□□□ -0.83
CTCFL-220ENST00000608858 CSGALNACT2Q8N6G5 542 aa9.85□□□□□ -0.83
CTCFL-220ENST00000608858 SORCS1Q8WY21 1168 aa9.85□□□□□ -0.83
CTCFL-220ENST00000608858 SPATA17Q96L03 361 aa9.85□□□□□ -0.83
CTCFL-220ENST00000608858 XPO6Q96QU8 1125 aaKnown RBP9.85□□□□□ -0.83
CTCFL-220ENST00000608858 TSPAN18Q96SJ8 248 aa9.85□□□□□ -0.83
CTCFL-220ENST00000608858 CCSER1Q9C0I3 900 aa9.85□□□□□ -0.83
CTCFL-220ENST00000608858 C17orf75Q9HAS0 396 aa9.85□□□□□ -0.83
CTCFL-220ENST00000608858 CRTAC1Q9NQ79 661 aa9.85□□□□□ -0.83
CTCFL-220ENST00000608858 RYDENQ9NUL5 291 aaKnown RBP9.85□□□□□ -0.83
CTCFL-220ENST00000608858 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.85□□□□□ -0.83
CTCFL-220ENST00000608858 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.85□□□□□ -0.83
CTCFL-220ENST00000608858 AHCTF1Q8WYP5 2266 aa9.85□□□□□ -0.83
CTCFL-220ENST00000608858 SPTAN1Q13813 2472 aaKnown RBP9.84□□□□□ -0.83
CTCFL-220ENST00000608858 LAD1O00515 517 aa9.84□□□□□ -0.83
CTCFL-220ENST00000608858 TERTO14746 1132 aaKnown RBP9.84□□□□□ -0.83
CTCFL-220ENST00000608858 OLFM2O95897 454 aa9.84□□□□□ -0.83
CTCFL-220ENST00000608858 TBX18O95935 607 aa9.84□□□□□ -0.83
CTCFL-220ENST00000608858 PFKLP17858 780 aa9.84□□□□□ -0.83
CTCFL-220ENST00000608858 MUTP22033 750 aa9.84□□□□□ -0.83
CTCFL-220ENST00000608858 COPAP53621 1224 aa9.84□□□□□ -0.83
CTCFL-220ENST00000608858 UCNP55089 124 aa9.84□□□□□ -0.83
CTCFL-220ENST00000608858 WNT7BP56706 349 aa9.84□□□□□ -0.83
CTCFL-220ENST00000608858 DHX8Q14562 1220 aaKnown RBP9.84□□□□□ -0.83
CTCFL-220ENST00000608858 SOWAHAQ2M3V2 549 aa9.84□□□□□ -0.83
CTCFL-220ENST00000608858 INAVAQ3KP66 663 aa9.84□□□□□ -0.83
CTCFL-220ENST00000608858 ATG14Q6ZNE5 492 aa9.84□□□□□ -0.83
CTCFL-220ENST00000608858 C4orf50Q6ZRC1 276 aa9.84□□□□□ -0.83
CTCFL-220ENST00000608858 DDX42Q86XP3 938 aaKnown RBP eCLIP9.84□□□□□ -0.83
CTCFL-220ENST00000608858 ADGRF2Q8IZF7 708 aa9.84□□□□□ -0.83
CTCFL-220ENST00000608858 WASF1Q92558 559 aa9.84□□□□□ -0.83
CTCFL-220ENST00000608858 P2RY11Q96G91 374 aa9.84□□□□□ -0.83
CTCFL-220ENST00000608858 HIC2Q96JB3 615 aa9.84□□□□□ -0.83
CTCFL-220ENST00000608858 ZHX3Q9H4I2 956 aa9.84□□□□□ -0.83
CTCFL-220ENST00000608858 ASB7Q9H672 318 aa9.84□□□□□ -0.83
CTCFL-220ENST00000608858 DERAQ9Y315 318 aa9.84□□□□□ -0.83
CTCFL-220ENST00000608858 MYH11P35749 1972 aa9.83□□□□□ -0.84
CTCFL-220ENST00000608858 CREBBPQ92793 2442 aa9.83□□□□□ -0.84
CTCFL-220ENST00000608858 GFRA2O00451 464 aa9.83□□□□□ -0.84
CTCFL-220ENST00000608858 CLDN5O00501 218 aa9.83□□□□□ -0.84
CTCFL-220ENST00000608858 WNT9AO14904 365 aa9.83□□□□□ -0.84
CTCFL-220ENST00000608858 USP12O75317 370 aa9.83□□□□□ -0.84
CTCFL-220ENST00000608858 KRT38O76015 456 aa9.83□□□□□ -0.84
CTCFL-220ENST00000608858 WNT1P04628 370 aa9.83□□□□□ -0.84
CTCFL-220ENST00000608858 EPHX1P07099 455 aa9.83□□□□□ -0.84
CTCFL-220ENST00000608858 YWHAQP27348 245 aa9.83□□□□□ -0.84
CTCFL-220ENST00000608858 MAGEA11P43364 429 aa9.83□□□□□ -0.84
CTCFL-220ENST00000608858 GRIA4P48058 902 aa9.83□□□□□ -0.84
CTCFL-220ENST00000608858 PPP3CCP48454 512 aa9.83□□□□□ -0.84
CTCFL-220ENST00000608858 LHX1P48742 406 aa9.83□□□□□ -0.84
CTCFL-220ENST00000608858 PGFP49763 221 aa9.83□□□□□ -0.84
CTCFL-220ENST00000608858 CDH8P55286 799 aa9.83□□□□□ -0.84
CTCFL-220ENST00000608858 GABREP78334 506 aa9.83□□□□□ -0.84
CTCFL-220ENST00000608858 GEN1Q17RS7 908 aa9.83□□□□□ -0.84
CTCFL-220ENST00000608858 ARSHQ5FYA8 562 aa9.83□□□□□ -0.84
CTCFL-220ENST00000608858 ARSIQ5FYB1 569 aa9.83□□□□□ -0.84
CTCFL-220ENST00000608858 MDH1BQ5I0G3 518 aa9.83□□□□□ -0.84
CTCFL-220ENST00000608858 HECTD3Q5T447 861 aa9.83□□□□□ -0.84
CTCFL-220ENST00000608858 CRELD2Q6UXH1 353 aaPredicted RBP9.83□□□□□ -0.84
CTCFL-220ENST00000608858 MYCT1Q8N699 235 aa9.83□□□□□ -0.84
CTCFL-220ENST00000608858 ZNF366Q8N895 744 aa9.83□□□□□ -0.84
CTCFL-220ENST00000608858 C4orf32Q8N8J7 132 aa9.83□□□□□ -0.84
CTCFL-220ENST00000608858 ZSWIM2Q8NEG5 633 aa9.83□□□□□ -0.84
CTCFL-220ENST00000608858 SCAMP5Q8TAC9 235 aa9.83□□□□□ -0.84
CTCFL-220ENST00000608858 SAP25Q8TEE9 199 aa9.83□□□□□ -0.84
CTCFL-220ENST00000608858 OTUB2Q96DC9 234 aa9.83□□□□□ -0.84
CTCFL-220ENST00000608858 PCED1BQ96HM7 432 aa9.83□□□□□ -0.84
CTCFL-220ENST00000608858 FUBP3Q96I24 572 aaKnown RBP eCLIP9.83□□□□□ -0.84
CTCFL-220ENST00000608858 ZNF578Q96N58 590 aaPredicted RBP9.83□□□□□ -0.84
CTCFL-220ENST00000608858 SLC6A18Q96N87 628 aa9.83□□□□□ -0.84
CTCFL-220ENST00000608858 ELF4Q99607 663 aaPredicted RBP9.83□□□□□ -0.84
CTCFL-220ENST00000608858 SYT15Q9BQS2 421 aa9.83□□□□□ -0.84
CTCFL-220ENST00000608858 TTLL2Q9BWV7 592 aa9.83□□□□□ -0.84
CTCFL-220ENST00000608858 KRTAP3-3Q9BYR6 98 aa9.83□□□□□ -0.84
CTCFL-220ENST00000608858 KRTAP3-2Q9BYR7 98 aa9.83□□□□□ -0.84
CTCFL-220ENST00000608858 NACA2Q9H009 215 aa9.83□□□□□ -0.84
CTCFL-220ENST00000608858 TMEM30AQ9NV96 361 aa9.83□□□□□ -0.84
CTCFL-220ENST00000608858 WDR35Q9P2L0 1181 aa9.83□□□□□ -0.84
CTCFL-220ENST00000608858 AGO2Q9UKV8 859 aaKnown RBP9.83□□□□□ -0.84
CTCFL-220ENST00000608858 C2CD2Q9Y426 696 aa9.83□□□□□ -0.84
CTCFL-220ENST00000608858 BOD1L1Q8NFC6 3051 aa9.83□□□□□ -0.84
CTCFL-220ENST00000608858 K7ENP7 123 aa9.82□□□□□ -0.84
CTCFL-220ENST00000608858 GABRDO14764 452 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms