RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 A0A1B0GUL6 1792 aa13□□□□□ -0.33
CTCFL-218ENST00000608440 CLIC2O15247 247 aa12.99□□□□□ -0.33
CTCFL-218ENST00000608440 GABRB3P28472 473 aa12.99□□□□□ -0.33
CTCFL-218ENST00000608440 ADGRE1Q14246 886 aa12.99□□□□□ -0.33
CTCFL-218ENST00000608440 CRY2Q49AN0 593 aa12.99□□□□□ -0.33
CTCFL-218ENST00000608440 ANKRD26P1Q6NSI1 321 aa12.99□□□□□ -0.33
CTCFL-218ENST00000608440 TMEM26Q6ZUK4 368 aa12.99□□□□□ -0.33
CTCFL-218ENST00000608440 CYP4V2Q6ZWL3 525 aaPredicted RBP12.99□□□□□ -0.33
CTCFL-218ENST00000608440 LYSMD3Q7Z3D4 306 aa12.99□□□□□ -0.33
CTCFL-218ENST00000608440 DEFB132Q7Z7B7 95 aa12.99□□□□□ -0.33
CTCFL-218ENST00000608440 DSG4Q86SJ6 1040 aa12.99□□□□□ -0.33
CTCFL-218ENST00000608440 NLGN1Q8N2Q7 840 aa12.99□□□□□ -0.33
CTCFL-218ENST00000608440 FBXW8Q8N3Y1 598 aa12.99□□□□□ -0.33
CTCFL-218ENST00000608440 GLIS1Q8NBF1 620 aa12.99□□□□□ -0.33
CTCFL-218ENST00000608440 MED30Q96HR3 178 aa12.99□□□□□ -0.33
CTCFL-218ENST00000608440 CAMKK2Q96RR4 588 aa12.99□□□□□ -0.33
CTCFL-218ENST00000608440 SLC2A11Q9BYW1 496 aa12.99□□□□□ -0.33
CTCFL-218ENST00000608440 IFT122Q9HBG6 1241 aa12.99□□□□□ -0.33
CTCFL-218ENST00000608440 COL1A1P02452 1464 aaPredicted RBP12.99□□□□□ -0.33
CTCFL-218ENST00000608440 HOXD10P28358 340 aa12.99□□□□□ -0.33
CTCFL-218ENST00000608440 BST1Q10588 318 aa12.99□□□□□ -0.33
CTCFL-218ENST00000608440 OXA1LQ15070 435 aa12.99□□□□□ -0.33
CTCFL-218ENST00000608440 SLC15A2Q16348 729 aa12.99□□□□□ -0.33
CTCFL-218ENST00000608440 TJAP1Q5JTD0 557 aa12.99□□□□□ -0.33
CTCFL-218ENST00000608440 NOP9Q86U38 636 aaKnown RBP12.99□□□□□ -0.33
CTCFL-218ENST00000608440 RALGPS2Q86X27 583 aaPredicted RBP12.99□□□□□ -0.33
CTCFL-218ENST00000608440 ATP6V0D2Q8N8Y2 350 aa12.99□□□□□ -0.33
CTCFL-218ENST00000608440 CCDC89Q8N998 374 aa12.99□□□□□ -0.33
CTCFL-218ENST00000608440 PKP2Q99959 881 aa12.99□□□□□ -0.33
CTCFL-218ENST00000608440 TMEM79Q9BSE2 394 aa12.99□□□□□ -0.33
CTCFL-218ENST00000608440 CXorf21Q9HAI6 301 aa12.99□□□□□ -0.33
CTCFL-218ENST00000608440 WDR6Q9NNW5 1121 aaKnown RBP12.99□□□□□ -0.33
CTCFL-218ENST00000608440 DSEQ9UL01 958 aa12.99□□□□□ -0.33
CTCFL-218ENST00000608440 ZNF804BA4D1E1 1349 aa12.98□□□□□ -0.33
CTCFL-218ENST00000608440 H3BNH8 94 aa12.98□□□□□ -0.33
CTCFL-218ENST00000608440 CCRL2O00421 344 aa12.98□□□□□ -0.33
CTCFL-218ENST00000608440 RSL1D1O76021 490 aaKnown RBP12.98□□□□□ -0.33
CTCFL-218ENST00000608440 MT-ND3P03897 115 aa12.98□□□□□ -0.33
CTCFL-218ENST00000608440 EPHA3P29320 983 aa12.98□□□□□ -0.33
CTCFL-218ENST00000608440 HNRNPFP52597 415 aaKnown RBP12.98□□□□□ -0.33
CTCFL-218ENST00000608440 PRAMEP78395 509 aa12.98□□□□□ -0.33
CTCFL-218ENST00000608440 LSM12Q3MHD2 195 aaKnown RBP12.98□□□□□ -0.33
CTCFL-218ENST00000608440 CAVIN4Q5BKX8 364 aa12.98□□□□□ -0.33
CTCFL-218ENST00000608440 CEP78Q5JTW2 689 aa12.98□□□□□ -0.33
CTCFL-218ENST00000608440 KRT79Q5XKE5 535 aa12.98□□□□□ -0.33
CTCFL-218ENST00000608440 EEPD1Q7L9B9 569 aa12.98□□□□□ -0.33
CTCFL-218ENST00000608440 ANKS1BQ7Z6G8 1248 aa12.98□□□□□ -0.33
CTCFL-218ENST00000608440 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.98□□□□□ -0.33
CTCFL-218ENST00000608440 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.98□□□□□ -0.33
CTCFL-218ENST00000608440 FLAD1Q8NFF5 587 aa12.98□□□□□ -0.33
CTCFL-218ENST00000608440 PAFAH2Q99487 392 aa12.98□□□□□ -0.33
CTCFL-218ENST00000608440 B3GNT4Q9C0J1 378 aa12.98□□□□□ -0.33
CTCFL-218ENST00000608440 BMP2KQ9NSY1 1161 aaPredicted RBP12.98□□□□□ -0.33
CTCFL-218ENST00000608440 TXNDC16Q9P2K2 825 aa12.98□□□□□ -0.33
CTCFL-218ENST00000608440 STRIP2Q9ULQ0 834 aa12.98□□□□□ -0.33
CTCFL-218ENST00000608440 C7orf72A4D263 438 aa12.98□□□□□ -0.33
CTCFL-218ENST00000608440 KRT18P05783 430 aaKnown RBP12.98□□□□□ -0.33
CTCFL-218ENST00000608440 SERPINA6P08185 405 aa12.98□□□□□ -0.33
CTCFL-218ENST00000608440 ETS1P14921 441 aa12.98□□□□□ -0.33
CTCFL-218ENST00000608440 PTPN1P18031 435 aaKnown RBP12.98□□□□□ -0.33
CTCFL-218ENST00000608440 CXCR2P25025 360 aa12.98□□□□□ -0.33
CTCFL-218ENST00000608440 CREB5Q02930 508 aa12.98□□□□□ -0.33
CTCFL-218ENST00000608440 ALCAMQ13740 583 aa12.98□□□□□ -0.33
CTCFL-218ENST00000608440 CALCRLQ16602 461 aa12.98□□□□□ -0.33
CTCFL-218ENST00000608440 ZBED5Q49AG3 693 aa12.98□□□□□ -0.33
CTCFL-218ENST00000608440 UBE2UQ5VVX9 321 aa12.98□□□□□ -0.33
CTCFL-218ENST00000608440 CES4AQ5XG92 561 aa12.98□□□□□ -0.33
CTCFL-218ENST00000608440 SYDE1Q6ZW31 735 aaPredicted RBP12.98□□□□□ -0.33
CTCFL-218ENST00000608440 CYP2U1Q7Z449 544 aa12.98□□□□□ -0.33
CTCFL-218ENST00000608440 FRMD5Q7Z6J6 570 aa12.98□□□□□ -0.33
CTCFL-218ENST00000608440 NEK8Q86SG6 692 aa12.98□□□□□ -0.33
CTCFL-218ENST00000608440 RELL1Q8IUW5 271 aa12.98□□□□□ -0.33
CTCFL-218ENST00000608440 ZC3H7AQ8IWR0 971 aaKnown RBP12.98□□□□□ -0.33
CTCFL-218ENST00000608440 MYO1HQ8N1T3 1032 aa12.98□□□□□ -0.33
CTCFL-218ENST00000608440 ZNF564Q8TBZ8 553 aaPredicted RBP12.98□□□□□ -0.33
CTCFL-218ENST00000608440 HCAR2Q8TDS4 363 aa12.98□□□□□ -0.33
CTCFL-218ENST00000608440 TBCKQ8TEA7 893 aa12.98□□□□□ -0.33
CTCFL-218ENST00000608440 TRUB1Q8WWH5 349 aaKnown RBP12.98□□□□□ -0.33
CTCFL-218ENST00000608440 SLC35C1Q96A29 364 aa12.98□□□□□ -0.33
CTCFL-218ENST00000608440 FEM1CQ96JP0 617 aa12.98□□□□□ -0.33
CTCFL-218ENST00000608440 FAM84BQ96KN1 310 aaPredicted RBP12.98□□□□□ -0.33
CTCFL-218ENST00000608440 ALPK1Q96QP1 1244 aa12.98□□□□□ -0.33
CTCFL-218ENST00000608440 AGPAT1Q99943 283 aa12.98□□□□□ -0.33
CTCFL-218ENST00000608440 SEMA6AQ9H2E6 1030 aa12.98□□□□□ -0.33
CTCFL-218ENST00000608440 CPVLQ9H3G5 476 aa12.98□□□□□ -0.33
CTCFL-218ENST00000608440 SLC24A2Q9UI40 661 aa12.98□□□□□ -0.33
CTCFL-218ENST00000608440 CDH7Q9ULB5 785 aa12.98□□□□□ -0.33
CTCFL-218ENST00000608440 POLIQ9UNA4 740 aa12.98□□□□□ -0.33
CTCFL-218ENST00000608440 MYO3BQ8WXR4 1341 aa12.98□□□□□ -0.33
CTCFL-218ENST00000608440 TBKBP1A7MCY6 615 aa12.97□□□□□ -0.33
CTCFL-218ENST00000608440 E9PMD0 336 aa12.97□□□□□ -0.33
CTCFL-218ENST00000608440 ALOX15BO15296 676 aa12.97□□□□□ -0.33
CTCFL-218ENST00000608440 ZBTB7AO95365 584 aa12.97□□□□□ -0.33
CTCFL-218ENST00000608440 ITGAXP20702 1163 aa12.97□□□□□ -0.33
CTCFL-218ENST00000608440 GRK2P25098 689 aa12.97□□□□□ -0.33
CTCFL-218ENST00000608440 GRM5P41594 1212 aa12.97□□□□□ -0.33
CTCFL-218ENST00000608440 SCARA3Q6AZY7 606 aa12.97□□□□□ -0.33
CTCFL-218ENST00000608440 TXNRD3Q86VQ6 643 aa12.97□□□□□ -0.33
CTCFL-218ENST00000608440 CHERPQ8IWX8 916 aaKnown RBP12.97□□□□□ -0.33
CTCFL-218ENST00000608440 COQ7Q99807 217 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms