RNA–Protein interactions for RNA: ENST00000608425.5

CTCFL-217, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,915 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-217ENST00000608425 C17orf75Q9HAS0 396 aa12.31□□□□□ -0.44
CTCFL-217ENST00000608425 KLQ9UEF7 1012 aa12.31□□□□□ -0.44
CTCFL-217ENST00000608425 RABGEF1Q9UJ41 708 aa12.31□□□□□ -0.44
CTCFL-217ENST00000608425 SOX13Q9UN79 622 aa12.31□□□□□ -0.44
CTCFL-217ENST00000608425 C1orf232A0A0U1RR37 186 aa12.31□□□□□ -0.44
CTCFL-217ENST00000608425 CFAP99D6REC4 459 aa12.31□□□□□ -0.44
CTCFL-217ENST00000608425 PLOD2O00469 737 aa12.31□□□□□ -0.44
CTCFL-217ENST00000608425 RSL1D1O76021 490 aaKnown RBP12.31□□□□□ -0.44
CTCFL-217ENST00000608425 CRKP46108 304 aa12.31□□□□□ -0.44
CTCFL-217ENST00000608425 MLLT10P55197 1068 aa12.31□□□□□ -0.44
CTCFL-217ENST00000608425 ZNF543Q08ER8 600 aa12.31□□□□□ -0.44
CTCFL-217ENST00000608425 GPATCH4Q5T3I0 446 aaKnown RBP12.31□□□□□ -0.44
CTCFL-217ENST00000608425 UBE2UQ5VVX9 321 aa12.31□□□□□ -0.44
CTCFL-217ENST00000608425 BRSK1Q8TDC3 778 aa12.31□□□□□ -0.44
CTCFL-217ENST00000608425 TRPC4APQ8TEL6 797 aa12.31□□□□□ -0.44
CTCFL-217ENST00000608425 FAM111AQ96PZ2 611 aa12.31□□□□□ -0.44
CTCFL-217ENST00000608425 NUF2Q9BZD4 464 aa12.31□□□□□ -0.44
CTCFL-217ENST00000608425 CPVLQ9H3G5 476 aa12.31□□□□□ -0.44
CTCFL-217ENST00000608425 BCS1LQ9Y276 419 aa12.31□□□□□ -0.44
CTCFL-217ENST00000608425 ENTPD3O75355 529 aa12.31□□□□□ -0.44
CTCFL-217ENST00000608425 GMNNO75496 209 aa12.31□□□□□ -0.44
CTCFL-217ENST00000608425 PRDX6P30041 224 aa12.31□□□□□ -0.44
CTCFL-217ENST00000608425 IFNA8P32881 189 aa12.31□□□□□ -0.44
CTCFL-217ENST00000608425 IST1P53990 364 aa12.31□□□□□ -0.44
CTCFL-217ENST00000608425 TUBA1BP68363 451 aa12.31□□□□□ -0.44
CTCFL-217ENST00000608425 ARHGAP4P98171 946 aa12.31□□□□□ -0.44
CTCFL-217ENST00000608425 NME3Q13232 169 aa12.31□□□□□ -0.44
CTCFL-217ENST00000608425 TJAP1Q5JTD0 557 aa12.31□□□□□ -0.44
CTCFL-217ENST00000608425 CYP4A22Q5TCH4 519 aa12.31□□□□□ -0.44
CTCFL-217ENST00000608425 IZUMO3Q5VZ72 239 aa12.31□□□□□ -0.44
CTCFL-217ENST00000608425 CYP4V2Q6ZWL3 525 aaPredicted RBP12.31□□□□□ -0.44
CTCFL-217ENST00000608425 TUBA1AQ71U36 451 aa12.31□□□□□ -0.44
CTCFL-217ENST00000608425 LILRA2Q8N149 483 aa12.31□□□□□ -0.44
CTCFL-217ENST00000608425 CCDC138Q96M89 665 aa12.31□□□□□ -0.44
CTCFL-217ENST00000608425 RILPQ96NA2 401 aa12.31□□□□□ -0.44
CTCFL-217ENST00000608425 CALN1Q9BXU9 219 aa12.31□□□□□ -0.44
CTCFL-217ENST00000608425 PLEKHA5Q9HAU0 1116 aa12.31□□□□□ -0.44
CTCFL-217ENST00000608425 CDH22Q9UJ99 828 aa12.31□□□□□ -0.44
CTCFL-217ENST00000608425 RAB26Q9ULW5 256 aa12.31□□□□□ -0.44
CTCFL-217ENST00000608425 CTDP1Q9Y5B0 961 aaPredicted RBP12.31□□□□□ -0.44
CTCFL-217ENST00000608425 SRCAPQ6ZRS2 3230 aa12.3□□□□□ -0.44
CTCFL-217ENST00000608425 SF3B1O75533 1304 aaKnown RBP eCLIP12.3□□□□□ -0.44
CTCFL-217ENST00000608425 FRMPD4Q14CM0 1322 aa12.3□□□□□ -0.44
CTCFL-217ENST00000608425 LOC100653049A0A140TA62 436 aa12.3□□□□□ -0.44
CTCFL-217ENST00000608425 CCDC195A0A1B0GUA6 201 aa12.3□□□□□ -0.44
CTCFL-217ENST00000608425 ATP2A1O14983 1001 aa12.3□□□□□ -0.44
CTCFL-217ENST00000608425 KRT34O76011 436 aa12.3□□□□□ -0.44
CTCFL-217ENST00000608425 ZNF182P17025 639 aaPredicted RBP12.3□□□□□ -0.44
CTCFL-217ENST00000608425 HSPA6P17066 643 aa12.3□□□□□ -0.44
CTCFL-217ENST00000608425 EIF3EP60228 445 aaKnown RBP12.3□□□□□ -0.44
CTCFL-217ENST00000608425 RPL26P61254 145 aaKnown RBP12.3□□□□□ -0.44
CTCFL-217ENST00000608425 DNASE1L3Q13609 305 aa12.3□□□□□ -0.44
CTCFL-217ENST00000608425 GPR107Q5VW38 600 aa12.3□□□□□ -0.44
CTCFL-217ENST00000608425 GALNT18Q6P9A2 607 aa12.3□□□□□ -0.44
CTCFL-217ENST00000608425 LYSMD3Q7Z3D4 306 aa12.3□□□□□ -0.44
CTCFL-217ENST00000608425 RHOT2Q8IXI1 618 aa12.3□□□□□ -0.44
CTCFL-217ENST00000608425 LRRC47Q8N1G4 583 aaKnown RBP12.3□□□□□ -0.44
CTCFL-217ENST00000608425 LARP4BQ92615 738 aaKnown RBP12.3□□□□□ -0.44
CTCFL-217ENST00000608425 FERMT1Q9BQL6 677 aa12.3□□□□□ -0.44
CTCFL-217ENST00000608425 IDI2Q9BXS1 227 aa12.3□□□□□ -0.44
CTCFL-217ENST00000608425 COL2A1P02458 1487 aaPredicted RBP12.3□□□□□ -0.44
CTCFL-217ENST00000608425 CCRL2O00421 344 aa12.3□□□□□ -0.44
CTCFL-217ENST00000608425 GIPC1O14908 333 aa12.3□□□□□ -0.44
CTCFL-217ENST00000608425 CCNT1O60563 726 aaKnown RBP12.3□□□□□ -0.44
CTCFL-217ENST00000608425 CCNT2O60583 730 aaKnown RBP12.3□□□□□ -0.44
CTCFL-217ENST00000608425 ZNF135P52742 658 aaPredicted RBP12.3□□□□□ -0.44
CTCFL-217ENST00000608425 AQP5P55064 265 aa12.3□□□□□ -0.44
CTCFL-217ENST00000608425 JAM2P57087 298 aa12.3□□□□□ -0.44
CTCFL-217ENST00000608425 MRPS22P82650 360 aaKnown RBP12.3□□□□□ -0.44
CTCFL-217ENST00000608425 COASYQ13057 564 aa12.3□□□□□ -0.44
CTCFL-217ENST00000608425 KBTBD6Q86V97 674 aa12.3□□□□□ -0.44
CTCFL-217ENST00000608425 KIAA2013Q8IYS2 634 aa12.3□□□□□ -0.44
CTCFL-217ENST00000608425 LRRC19Q9H756 370 aa12.3□□□□□ -0.44
CTCFL-217ENST00000608425 RPF2Q9H7B2 306 aaKnown RBP12.3□□□□□ -0.44
CTCFL-217ENST00000608425 CCDC177Q9NQR7 707 aaPredicted RBP12.3□□□□□ -0.44
CTCFL-217ENST00000608425 TBKBP1A7MCY6 615 aa12.29□□□□□ -0.44
CTCFL-217ENST00000608425 H3BMQ9 156 aa12.29□□□□□ -0.44
CTCFL-217ENST00000608425 EIF2AK2P19525 551 aaKnown RBP12.29□□□□□ -0.44
CTCFL-217ENST00000608425 IL4RP24394 825 aa12.29□□□□□ -0.44
CTCFL-217ENST00000608425 EPHA3P29320 983 aa12.29□□□□□ -0.44
CTCFL-217ENST00000608425 DACT2Q5SW24 774 aa12.29□□□□□ -0.44
CTCFL-217ENST00000608425 RWDD4Q6NW29 188 aaKnown RBP12.29□□□□□ -0.44
CTCFL-217ENST00000608425 TTC23LQ6PF05 361 aa12.29□□□□□ -0.44
CTCFL-217ENST00000608425 NSMFQ6X4W1 530 aa12.29□□□□□ -0.44
CTCFL-217ENST00000608425 TMEM26Q6ZUK4 368 aa12.29□□□□□ -0.44
CTCFL-217ENST00000608425 DEFB107AQ8IZN7 70 aa12.29□□□□□ -0.44
CTCFL-217ENST00000608425 GLIS1Q8NBF1 620 aa12.29□□□□□ -0.44
CTCFL-217ENST00000608425 TBCKQ8TEA7 893 aa12.29□□□□□ -0.44
CTCFL-217ENST00000608425 SCFD1Q8WVM8 642 aa12.29□□□□□ -0.44
CTCFL-217ENST00000608425 GJA10Q969M2 543 aa12.29□□□□□ -0.44
CTCFL-217ENST00000608425 OTUD5Q96G74 571 aa12.29□□□□□ -0.44
CTCFL-217ENST00000608425 COG8Q96MW5 612 aa12.29□□□□□ -0.44
CTCFL-217ENST00000608425 ACAP3Q96P50 834 aa12.29□□□□□ -0.44
CTCFL-217ENST00000608425 TRIM56Q9BRZ2 755 aaKnown RBP12.29□□□□□ -0.44
CTCFL-217ENST00000608425 FRMPD2Q68DX3 1309 aaPredicted RBP12.29□□□□□ -0.44
CTCFL-217ENST00000608425 PNMA6FA0A0J9YX94 578 aa12.29□□□□□ -0.44
CTCFL-217ENST00000608425 C7orf72A4D263 438 aa12.29□□□□□ -0.44
CTCFL-217ENST00000608425 POTEMA6NI47 508 aa12.29□□□□□ -0.44
CTCFL-217ENST00000608425 A8MX80 341 aa12.29□□□□□ -0.44
CTCFL-217ENST00000608425 TBCAO75347 108 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms