RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 CRTAC1Q9NQ79 661 aa16.52■□□□□ 0.24
CTSA-214ENST00000606788 SHOC2Q9UQ13 582 aa16.52■□□□□ 0.24
CTSA-214ENST00000606788 ZSWIM8A7E2V4 1837 aa16.52■□□□□ 0.24
CTSA-214ENST00000606788 ALOX15BO15296 676 aa16.52■□□□□ 0.23
CTSA-214ENST00000606788 METTL18O95568 372 aa16.52■□□□□ 0.23
CTSA-214ENST00000606788 ASGR1P07306 291 aa16.52■□□□□ 0.23
CTSA-214ENST00000606788 KRT4P19013 534 aa16.52■□□□□ 0.23
CTSA-214ENST00000606788 BOLA3Q53S33 107 aa16.52■□□□□ 0.23
CTSA-214ENST00000606788 DENND5BQ6ZUT9 1274 aa16.52■□□□□ 0.23
CTSA-214ENST00000606788 PRPF39Q86UA1 669 aaKnown RBP16.52■□□□□ 0.23
CTSA-214ENST00000606788 SLC7A14Q8TBB6 771 aa16.52■□□□□ 0.23
CTSA-214ENST00000606788 ETNK1Q9HBU6 452 aa16.52■□□□□ 0.23
CTSA-214ENST00000606788 ARL5CA6NH57 179 aa16.51■□□□□ 0.23
CTSA-214ENST00000606788 AP1G2O75843 785 aa16.51■□□□□ 0.23
CTSA-214ENST00000606788 L1CAMP32004 1257 aa16.51■□□□□ 0.23
CTSA-214ENST00000606788 TADA2BQ86TJ2 420 aa16.51■□□□□ 0.23
CTSA-214ENST00000606788 UNC5BQ8IZJ1 945 aa16.51■□□□□ 0.23
CTSA-214ENST00000606788 TMEM209Q96SK2 561 aa16.51■□□□□ 0.23
CTSA-214ENST00000606788 PAFAH2Q99487 392 aa16.51■□□□□ 0.23
CTSA-214ENST00000606788 USP29Q9HBJ7 922 aa16.51■□□□□ 0.23
CTSA-214ENST00000606788 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.51■□□□□ 0.232e-6■■□□□ 12.2
CTSA-214ENST00000606788 SAMD15Q9P1V8 674 aa16.51■□□□□ 0.23
CTSA-214ENST00000606788 SLC17A6Q9P2U8 582 aa16.51■□□□□ 0.23
CTSA-214ENST00000606788 FOXN2P32314 431 aa16.51■□□□□ 0.23
CTSA-214ENST00000606788 PTPN7P35236 360 aa16.51■□□□□ 0.23
CTSA-214ENST00000606788 WDR4P57081 412 aaKnown RBP16.51■□□□□ 0.23
CTSA-214ENST00000606788 TNFAIP8L3Q5GJ75 292 aa16.51■□□□□ 0.23
CTSA-214ENST00000606788 MAML1Q92585 1016 aa16.51■□□□□ 0.23
CTSA-214ENST00000606788 KATNAL1Q9BW62 490 aa16.51■□□□□ 0.23
CTSA-214ENST00000606788 ABCF3Q9NUQ8 709 aa16.51■□□□□ 0.23
CTSA-214ENST00000606788 NUP205Q92621 2012 aa16.51■□□□□ 0.23
CTSA-214ENST00000606788 YJEFN3A6XGL0 299 aa16.51■□□□□ 0.23
CTSA-214ENST00000606788 E7ENQ6 273 aa16.51■□□□□ 0.23
CTSA-214ENST00000606788 DNM1LO00429 736 aa16.51■□□□□ 0.23
CTSA-214ENST00000606788 UGT1A9O60656 530 aa16.51■□□□□ 0.23
CTSA-214ENST00000606788 STAU1O95793 577 aaKnown RBP16.51■□□□□ 0.23
CTSA-214ENST00000606788 ITGB1P05556 798 aa16.51■□□□□ 0.23
CTSA-214ENST00000606788 THP07101 528 aa16.51■□□□□ 0.23
CTSA-214ENST00000606788 GNAT1P11488 350 aa16.51■□□□□ 0.23
CTSA-214ENST00000606788 AP1B1Q10567 949 aa16.51■□□□□ 0.23
CTSA-214ENST00000606788 SPARCL1Q14515 664 aa16.51■□□□□ 0.23
CTSA-214ENST00000606788 STILQ15468 1287 aa16.51■□□□□ 0.23
CTSA-214ENST00000606788 KCNA10Q16322 511 aa16.51■□□□□ 0.23
CTSA-214ENST00000606788 CLEC20AQ6ZU45 233 aa16.51■□□□□ 0.23
CTSA-214ENST00000606788 UNC93AQ86WB7 457 aa16.51■□□□□ 0.23
CTSA-214ENST00000606788 MPP5Q8N3R9 675 aa16.51■□□□□ 0.23
CTSA-214ENST00000606788 CCDC197Q8NCU1 140 aa16.51■□□□□ 0.23
CTSA-214ENST00000606788 PCED1BQ96HM7 432 aa16.51■□□□□ 0.23
CTSA-214ENST00000606788 CSPG4P5Q96PW8 444 aa16.51■□□□□ 0.23
CTSA-214ENST00000606788 UGT1A7Q9HAW7 530 aa16.51■□□□□ 0.23
CTSA-214ENST00000606788 UGT1A10Q9HAW8 530 aa16.51■□□□□ 0.23
CTSA-214ENST00000606788 UGT1A8Q9HAW9 530 aa16.51■□□□□ 0.23
CTSA-214ENST00000606788 FAM72CH0Y354 149 aa16.5■□□□□ 0.23
CTSA-214ENST00000606788 KCNK1O00180 336 aa16.5■□□□□ 0.23
CTSA-214ENST00000606788 KBTBD12Q3ZCT8 623 aa16.5■□□□□ 0.23
CTSA-214ENST00000606788 FAM72AQ5TYM5 149 aa16.5■□□□□ 0.23
CTSA-214ENST00000606788 FAM72DQ6L9T8 149 aa16.5■□□□□ 0.23
CTSA-214ENST00000606788 CASC4Q6P4E1 433 aa16.5■□□□□ 0.23
CTSA-214ENST00000606788 PPP1R21Q6ZMI0 780 aa16.5■□□□□ 0.23
CTSA-214ENST00000606788 AGMOQ6ZNB7 445 aa16.5■□□□□ 0.23
CTSA-214ENST00000606788 PACS2Q86VP3 889 aa16.5■□□□□ 0.23
CTSA-214ENST00000606788 FAM72BQ86X60 149 aa16.5■□□□□ 0.23
CTSA-214ENST00000606788 PPM1NQ8N819 430 aa16.5■□□□□ 0.23
CTSA-214ENST00000606788 TNIP3Q96KP6 325 aa16.5■□□□□ 0.23
CTSA-214ENST00000606788 AGAP3Q96P47 875 aa16.5■□□□□ 0.23
CTSA-214ENST00000606788 XPNPEP3Q9NQH7 507 aa16.5■□□□□ 0.23
CTSA-214ENST00000606788 MTMR10Q9NXD2 777 aa16.5■□□□□ 0.23
CTSA-214ENST00000606788 GTF2IRD1Q9UHL9 959 aa16.5■□□□□ 0.23
CTSA-214ENST00000606788 RABGEF1Q9UJ41 708 aa16.5■□□□□ 0.23
CTSA-214ENST00000606788 GRID1Q9ULK0 1009 aa16.5■□□□□ 0.23
CTSA-214ENST00000606788 PADI3Q9ULW8 664 aa16.5■□□□□ 0.23
CTSA-214ENST00000606788 DERAQ9Y315 318 aa16.5■□□□□ 0.23
CTSA-214ENST00000606788 XPOTO43592 962 aaKnown RBP16.5■□□□□ 0.23
CTSA-214ENST00000606788 AOC2O75106 756 aa16.5■□□□□ 0.23
CTSA-214ENST00000606788 RNASELQ05823 741 aaKnown RBP16.5■□□□□ 0.23
CTSA-214ENST00000606788 SLC1A5Q15758 541 aa16.5■□□□□ 0.23
CTSA-214ENST00000606788 TAZQ16635 292 aa16.5■□□□□ 0.23
CTSA-214ENST00000606788 CRYBG2Q8N1P7 616 aa16.5■□□□□ 0.23
CTSA-214ENST00000606788 SYT15Q9BQS2 421 aa16.5■□□□□ 0.23
CTSA-214ENST00000606788 MTG1Q9BT17 334 aaPredicted RBP16.5■□□□□ 0.23
CTSA-214ENST00000606788 E2F8A0AVK6 867 aa16.49■□□□□ 0.23
CTSA-214ENST00000606788 CCDC78A2IDD5 438 aa16.49■□□□□ 0.23
CTSA-214ENST00000606788 UNCXA6NJT0 531 aa16.49■□□□□ 0.23
CTSA-214ENST00000606788 OR4Q2P0C623 313 aa16.49■□□□□ 0.23
CTSA-214ENST00000606788 NCAM1P13591 858 aa16.49■□□□□ 0.23
CTSA-214ENST00000606788 NPR3P17342 541 aa16.49■□□□□ 0.23
CTSA-214ENST00000606788 CACNB2Q08289 660 aaPredicted RBP16.49■□□□□ 0.23
CTSA-214ENST00000606788 BMPR2Q13873 1038 aa16.49■□□□□ 0.23
CTSA-214ENST00000606788 TIGD5Q53EQ6 642 aa16.49■□□□□ 0.23
CTSA-214ENST00000606788 CES3Q6UWW8 571 aa16.49■□□□□ 0.23
CTSA-214ENST00000606788 MICALCLQ6ZW33 695 aa16.49■□□□□ 0.23
CTSA-214ENST00000606788 TRABD2AQ86V40 505 aa16.49■□□□□ 0.23
CTSA-214ENST00000606788 PPP1R10Q96QC0 940 aaKnown RBP16.49■□□□□ 0.23
CTSA-214ENST00000606788 ANLNQ9NQW6 1124 aa16.49■□□□□ 0.23
CTSA-214ENST00000606788 PIGVQ9NUD9 493 aa16.49■□□□□ 0.23
CTSA-214ENST00000606788 DCAF8L1A6NGE4 600 aa16.49■□□□□ 0.23
CTSA-214ENST00000606788 USP12O75317 370 aa16.49■□□□□ 0.23
CTSA-214ENST00000606788 DUSP11O75319 330 aaKnown RBP16.49■□□□□ 0.23
CTSA-214ENST00000606788 KCNE1P15382 129 aa16.49■□□□□ 0.23
CTSA-214ENST00000606788 DESP17661 470 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms