RNA–Protein interactions for RNA: ENST00000602619.1

SGMS1-207, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-207ENST00000602619 ATICP31939 592 aa3.33□□□□□ -1.88
SGMS1-207ENST00000602619 MCM5P33992 734 aa3.33□□□□□ -1.88
SGMS1-207ENST00000602619 PPM1AP35813 382 aa3.33□□□□□ -1.88
SGMS1-207ENST00000602619 IL6STP40189 918 aaPredicted RBP3.33□□□□□ -1.88
SGMS1-207ENST00000602619 MTHFSP49914 203 aa3.33□□□□□ -1.88
SGMS1-207ENST00000602619 SUMO2P61956 95 aaKnown RBP3.33□□□□□ -1.88
SGMS1-207ENST00000602619 IRX6P78412 446 aaPredicted RBP3.33□□□□□ -1.88
SGMS1-207ENST00000602619 E2F1Q01094 437 aa3.33□□□□□ -1.88
SGMS1-207ENST00000602619 NSUN2Q08J23 767 aaKnown RBP eCLIP3.33□□□□□ -1.88
SGMS1-207ENST00000602619 ATP1A4Q13733 1029 aa3.33□□□□□ -1.88
SGMS1-207ENST00000602619 TBC1D25Q3MII6 688 aa3.33□□□□□ -1.88
SGMS1-207ENST00000602619 RNASE12Q5GAN4 147 aaKnown RBP3.33□□□□□ -1.88
SGMS1-207ENST00000602619 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.33□□□□□ -1.88
SGMS1-207ENST00000602619 TMEM63BQ5T3F8 832 aa3.33□□□□□ -1.88
SGMS1-207ENST00000602619 FAXCQ5TGI0 409 aa3.33□□□□□ -1.88
SGMS1-207ENST00000602619 TLDC1Q6P9B6 456 aa3.33□□□□□ -1.88
SGMS1-207ENST00000602619 KIRREL2Q6UWL6 708 aa3.33□□□□□ -1.88
SGMS1-207ENST00000602619 ZNF788Q6ZQV5 615 aa3.33□□□□□ -1.88
SGMS1-207ENST00000602619 SLC29A4Q7RTT9 530 aa3.33□□□□□ -1.88
SGMS1-207ENST00000602619 LRRC71Q8N4P6 559 aa3.33□□□□□ -1.88
SGMS1-207ENST00000602619 PNPLA1Q8N8W4 532 aa3.33□□□□□ -1.88
SGMS1-207ENST00000602619 ABHD11Q8NFV4 315 aa3.33□□□□□ -1.88
SGMS1-207ENST00000602619 XAGE5Q8WWM1 108 aa3.33□□□□□ -1.88
SGMS1-207ENST00000602619 EVI5LQ96CN4 794 aa3.33□□□□□ -1.88
SGMS1-207ENST00000602619 LRRC46Q96FV0 321 aa3.33□□□□□ -1.88
SGMS1-207ENST00000602619 KAZALD1Q96I82 304 aa3.33□□□□□ -1.88
SGMS1-207ENST00000602619 ZBTB45Q96K62 511 aaPredicted RBP3.33□□□□□ -1.88
SGMS1-207ENST00000602619 HIST1H2AAQ96QV6 131 aa3.33□□□□□ -1.88
SGMS1-207ENST00000602619 SNX18Q96RF0 628 aa3.33□□□□□ -1.88
SGMS1-207ENST00000602619 WDR12Q9GZL7 423 aaKnown RBP3.33□□□□□ -1.88
SGMS1-207ENST00000602619 TBC1D23Q9NUY8 699 aa3.33□□□□□ -1.88
SGMS1-207ENST00000602619 STEAP1Q9UHE8 339 aa3.33□□□□□ -1.88
SGMS1-207ENST00000602619 AMFRQ9UKV5 643 aa3.33□□□□□ -1.88
SGMS1-207ENST00000602619 PNMA2Q9UL42 364 aa3.33□□□□□ -1.88
SGMS1-207ENST00000602619 DTNAQ9Y4J8 743 aa3.33□□□□□ -1.88
SGMS1-207ENST00000602619 AOX1Q06278 1338 aa3.33□□□□□ -1.88
SGMS1-207ENST00000602619 TARM1B6A8C7 271 aa3.32□□□□□ -1.88
SGMS1-207ENST00000602619 PSMD9O00233 223 aa3.32□□□□□ -1.88
SGMS1-207ENST00000602619 EXOC5O00471 708 aa3.32□□□□□ -1.88
SGMS1-207ENST00000602619 TMPRSS11DO60235 418 aa3.32□□□□□ -1.88
SGMS1-207ENST00000602619 NDST3O95803 873 aa3.32□□□□□ -1.88
SGMS1-207ENST00000602619 LATS1O95835 1130 aa3.32□□□□□ -1.88
SGMS1-207ENST00000602619 CELA2AP08217 269 aa3.32□□□□□ -1.88
SGMS1-207ENST00000602619 FAM163BP0C2L3 166 aa3.32□□□□□ -1.88
SGMS1-207ENST00000602619 SETSIPP0DME0 302 aa3.32□□□□□ -1.88
SGMS1-207ENST00000602619 IDEP14735 1019 aa3.32□□□□□ -1.88
SGMS1-207ENST00000602619 ABCB4P21439 1286 aa3.32□□□□□ -1.88
SGMS1-207ENST00000602619 DIO1P49895 249 aa3.32□□□□□ -1.88
SGMS1-207ENST00000602619 CYP4F2P78329 520 aa3.32□□□□□ -1.88
SGMS1-207ENST00000602619 PSG6Q00889 435 aa3.32□□□□□ -1.88
SGMS1-207ENST00000602619 TFF2Q03403 129 aa3.32□□□□□ -1.88
SGMS1-207ENST00000602619 POU5F1BQ06416 359 aa3.32□□□□□ -1.88
SGMS1-207ENST00000602619 GPS1Q13098 491 aa3.32□□□□□ -1.88
SGMS1-207ENST00000602619 STK3Q13188 491 aa3.32□□□□□ -1.88
SGMS1-207ENST00000602619 RAPGEF1Q13905 1077 aa3.32□□□□□ -1.88
SGMS1-207ENST00000602619 KCNJ12Q14500 433 aa3.32□□□□□ -1.88
SGMS1-207ENST00000602619 RAB30Q15771 203 aa3.32□□□□□ -1.88
SGMS1-207ENST00000602619 AASDHQ4L235 1098 aaPredicted RBP3.32□□□□□ -1.88
SGMS1-207ENST00000602619 TSTD2Q5T7W7 516 aa3.32□□□□□ -1.88
SGMS1-207ENST00000602619 WDR78Q5VTH9 848 aa3.32□□□□□ -1.88
SGMS1-207ENST00000602619 RRAGBQ5VZM2 374 aa3.32□□□□□ -1.88
SGMS1-207ENST00000602619 FAM90A2PQ658T7 463 aa3.32□□□□□ -1.88
SGMS1-207ENST00000602619 RAP1GAP2Q684P5 730 aa3.32□□□□□ -1.88
SGMS1-207ENST00000602619 DPY19L3Q6ZPD9 716 aa3.32□□□□□ -1.88
SGMS1-207ENST00000602619 RASAL3Q86YV0 1011 aa3.32□□□□□ -1.88
SGMS1-207ENST00000602619 CLASRPQ8N2M8 674 aaKnown RBP3.32□□□□□ -1.88
SGMS1-207ENST00000602619 SIRT6Q8N6T7 355 aa3.32□□□□□ -1.88
SGMS1-207ENST00000602619 PAF1Q8N7H5 531 aa3.32□□□□□ -1.88
SGMS1-207ENST00000602619 DDB2Q92466 427 aa3.32□□□□□ -1.88
SGMS1-207ENST00000602619 PAAF1Q9BRP4 392 aa3.32□□□□□ -1.88
SGMS1-207ENST00000602619 PCDHAC1Q9H158 963 aa3.32□□□□□ -1.88
SGMS1-207ENST00000602619 ARFGAP3Q9NP61 516 aa3.32□□□□□ -1.88
SGMS1-207ENST00000602619 ASB6Q9NWX5 421 aa3.32□□□□□ -1.88
SGMS1-207ENST00000602619 TMOD4Q9NZQ9 345 aa3.32□□□□□ -1.88
SGMS1-207ENST00000602619 SEMA5BQ9P283 1151 aa3.32□□□□□ -1.88
SGMS1-207ENST00000602619 NKX1-2Q9UD57 310 aaPredicted RBP3.32□□□□□ -1.88
SGMS1-207ENST00000602619 LAS1LQ9Y4W2 734 aaKnown RBP3.32□□□□□ -1.88
SGMS1-207ENST00000602619 PCDHGB2Q9Y5G2 931 aa3.32□□□□□ -1.88
SGMS1-207ENST00000602619 WNT6Q9Y6F9 365 aa3.32□□□□□ -1.88
SGMS1-207ENST00000602619 A0A087WV62 115 aa3.31□□□□□ -1.88
SGMS1-207ENST00000602619 TCRBV5S1A1TA0A578 114 aa3.31□□□□□ -1.88
SGMS1-207ENST00000602619 GOLGA6L3A6NEY3 463 aa3.31□□□□□ -1.88
SGMS1-207ENST00000602619 LINC01548A6NM66 108 aa3.31□□□□□ -1.88
SGMS1-207ENST00000602619 H3BNC9 293 aa3.31□□□□□ -1.88
SGMS1-207ENST00000602619 QSOX1O00391 747 aa3.31□□□□□ -1.88
SGMS1-207ENST00000602619 PCDH17O14917 1159 aa3.31□□□□□ -1.88
SGMS1-207ENST00000602619 SNX2O60749 519 aa3.31□□□□□ -1.88
SGMS1-207ENST00000602619 COQ9O75208 318 aa3.31□□□□□ -1.88
SGMS1-207ENST00000602619 WDR47O94967 919 aa3.31□□□□□ -1.88
SGMS1-207ENST00000602619 NTSR2O95665 410 aa3.31□□□□□ -1.88
SGMS1-207ENST00000602619 HNRNPCP07910 306 aaKnown RBP eCLIP3.31□□□□□ -1.88
SGMS1-207ENST00000602619 ENGP17813 658 aa3.31□□□□□ -1.88
SGMS1-207ENST00000602619 NTSR1P30989 418 aa3.31□□□□□ -1.88
SGMS1-207ENST00000602619 ITGA8P53708 1063 aa3.31□□□□□ -1.88
SGMS1-207ENST00000602619 EIF4A1P60842 406 aaKnown RBP3.31□□□□□ -1.88
SGMS1-207ENST00000602619 LMAN2Q12907 356 aa3.31□□□□□ -1.88
SGMS1-207ENST00000602619 DNASE1L3Q13609 305 aa3.31□□□□□ -1.88
SGMS1-207ENST00000602619 PROSER3Q2NL68 480 aa3.31□□□□□ -1.88
SGMS1-207ENST00000602619 TRIM71Q2Q1W2 868 aaKnown RBP3.31□□□□□ -1.88
SGMS1-207ENST00000602619 FAM153CQ494X1 144 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms