RNA–Protein interactions for RNA: ENST00000601453.2

ATM-225, Transcript of ATM serine/threonine kinase, human

TSL 3

Gene ATM, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-225	ENST00000601453	MLXIPL	Q9NP71	852 aa		4.39	□□□□□ -1.71
ATM-225	ENST00000601453	PCDHA12	Q9UN75	941 aa		4.39	□□□□□ -1.71
ATM-225	ENST00000601453	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	4.38	□□□□□ -1.71
ATM-225	ENST00000601453	SPTLC2	O15270	562 aa		4.38	□□□□□ -1.71
ATM-225	ENST00000601453	PRAMEF2	O60811	474 aa		4.38	□□□□□ -1.71
ATM-225	ENST00000601453	PLA2G2A	P14555	144 aa		4.38	□□□□□ -1.71
ATM-225	ENST00000601453	TBXAS1	P24557	533 aa	Predicted RBP	4.38	□□□□□ -1.71
ATM-225	ENST00000601453	JAK3	P52333	1124 aa		4.38	□□□□□ -1.71
ATM-225	ENST00000601453	SLC12A2	P55011	1212 aa		4.38	□□□□□ -1.71
ATM-225	ENST00000601453	TXNL4A	P83876	142 aa	Known RBP	4.38	□□□□□ -1.71
ATM-225	ENST00000601453	INPP5J	Q15735	1006 aa	Predicted RBP	4.38	□□□□□ -1.71
ATM-225	ENST00000601453	PDXDC1	Q6P996	788 aa		4.38	□□□□□ -1.71
ATM-225	ENST00000601453	FAM71D	Q8N9W8	422 aa		4.38	□□□□□ -1.71
ATM-225	ENST00000601453	SLC44A5	Q8NCS7	719 aa		4.38	□□□□□ -1.71
ATM-225	ENST00000601453	IL31RA	Q8NI17	732 aa		4.38	□□□□□ -1.71
ATM-225	ENST00000601453	JPH3	Q8WXH2	748 aa	Predicted RBP	4.38	□□□□□ -1.71
ATM-225	ENST00000601453	P2RY11	Q96G91	374 aa		4.38	□□□□□ -1.71
ATM-225	ENST00000601453	SUCLG2	Q96I99	432 aa		4.38	□□□□□ -1.71
ATM-225	ENST00000601453	VPS50	Q96JG6	964 aa		4.38	□□□□□ -1.71
ATM-225	ENST00000601453	TUBB6	Q9BUF5	446 aa		4.38	□□□□□ -1.71
ATM-225	ENST00000601453	DHX36	Q9H2U1	1008 aa	Known RBP	4.38	□□□□□ -1.71
ATM-225	ENST00000601453	ATP6V0A4	Q9HBG4	840 aa		4.38	□□□□□ -1.71
ATM-225	ENST00000601453	ARL8B	Q9NVJ2	186 aa		4.38	□□□□□ -1.71
ATM-225	ENST00000601453	MSRB1	Q9NZV6	116 aa		4.38	□□□□□ -1.71
ATM-225	ENST00000601453	STEAP1	Q9UHE8	339 aa		4.38	□□□□□ -1.71
ATM-225	ENST00000601453	COG5	Q9UP83	839 aa		4.38	□□□□□ -1.71
ATM-225	ENST00000601453	SIRT4	Q9Y6E7	314 aa	Predicted RBP	4.38	□□□□□ -1.71
ATM-225	ENST00000601453	TMEM272	A0A1B0GTI8	110 aa		4.37	□□□□□ -1.71
ATM-225	ENST00000601453		F8W810	466 aa		4.37	□□□□□ -1.71
ATM-225	ENST00000601453	PYCARD-AS1	I3L0S3	204 aa		4.37	□□□□□ -1.71
ATM-225	ENST00000601453	PPM1G	O15355	546 aa	Predicted RBP	4.37	□□□□□ -1.71
ATM-225	ENST00000601453	PIAS2	O75928	621 aa		4.37	□□□□□ -1.71
ATM-225	ENST00000601453	RPS6KB1	P23443	525 aa		4.37	□□□□□ -1.71
ATM-225	ENST00000601453	KLRC1	P26715	233 aa		4.37	□□□□□ -1.71
ATM-225	ENST00000601453	TNFRSF8	P28908	595 aa		4.37	□□□□□ -1.71
ATM-225	ENST00000601453	HOXA7	P31268	230 aa	Predicted RBP	4.37	□□□□□ -1.71
ATM-225	ENST00000601453	ARRB2	P32121	409 aa		4.37	□□□□□ -1.71
ATM-225	ENST00000601453	NEK2	P51955	445 aa		4.37	□□□□□ -1.71
ATM-225	ENST00000601453	AGFG1	P52594	562 aa	Known RBP	4.37	□□□□□ -1.71
ATM-225	ENST00000601453	ARHGEF7	Q14155	803 aa		4.37	□□□□□ -1.71
ATM-225	ENST00000601453	ANO6	Q4KMQ2	910 aa		4.37	□□□□□ -1.71
ATM-225	ENST00000601453	BRDT	Q58F21	947 aa	Predicted RBP	4.37	□□□□□ -1.71
ATM-225	ENST00000601453	ZNF324B	Q6AW86	544 aa	Predicted RBP	4.37	□□□□□ -1.71
ATM-225	ENST00000601453	USP49	Q70CQ1	688 aa		4.37	□□□□□ -1.71
ATM-225	ENST00000601453	TFAP2D	Q7Z6R9	452 aa		4.37	□□□□□ -1.71
ATM-225	ENST00000601453	ZNF668	Q96K58	619 aa	Predicted RBP	4.37	□□□□□ -1.71
ATM-225	ENST00000601453	ARHGAP39	Q9C0H5	1083 aa		4.37	□□□□□ -1.71
ATM-225	ENST00000601453	TRBV5-3	A0A0A0MS03	114 aa		4.36	□□□□□ -1.71
ATM-225	ENST00000601453	SLC22A23	A1A5C7	686 aa		4.36	□□□□□ -1.71
ATM-225	ENST00000601453	TRIM43B	A6NCK2	446 aa		4.36	□□□□□ -1.71
ATM-225	ENST00000601453	TBX3	O15119	743 aa		4.36	□□□□□ -1.71
ATM-225	ENST00000601453	HOXB2	P14652	356 aa		4.36	□□□□□ -1.71
ATM-225	ENST00000601453	SLC7A1	P30825	629 aa		4.36	□□□□□ -1.71
ATM-225	ENST00000601453	POLD2	P49005	469 aa		4.36	□□□□□ -1.71
ATM-225	ENST00000601453	ITGA8	P53708	1063 aa		4.36	□□□□□ -1.71
ATM-225	ENST00000601453	EIF4A1	P60842	406 aa	Known RBP	4.36	□□□□□ -1.71
ATM-225	ENST00000601453	CCDC15	Q0P6D6	951 aa		4.36	□□□□□ -1.71
ATM-225	ENST00000601453	CAPRIN2	Q6IMN6	1127 aa	Known RBP	4.36	□□□□□ -1.71
ATM-225	ENST00000601453	RFX6	Q8HWS3	928 aa		4.36	□□□□□ -1.71
ATM-225	ENST00000601453	C11orf44	Q8N8P7	122 aa		4.36	□□□□□ -1.71
ATM-225	ENST00000601453	PPP1R35	Q8TAP8	253 aa		4.36	□□□□□ -1.71
ATM-225	ENST00000601453	PIGK	Q92643	395 aa		4.36	□□□□□ -1.71
ATM-225	ENST00000601453	TRIM43	Q96BQ3	446 aa	Predicted RBP	4.36	□□□□□ -1.71
ATM-225	ENST00000601453	NTPCR	Q9BSD7	190 aa	Known RBP	4.36	□□□□□ -1.71
ATM-225	ENST00000601453	CINP	Q9BW66	212 aa	Predicted RBP	4.36	□□□□□ -1.71
ATM-225	ENST00000601453	PAPOLB	Q9NRJ5	636 aa	Known RBP	4.36	□□□□□ -1.71
ATM-225	ENST00000601453	HOMER2	Q9NSB8	354 aa		4.36	□□□□□ -1.71
ATM-225	ENST00000601453	RGS17	Q9UGC6	210 aa	Predicted RBP	4.36	□□□□□ -1.71
ATM-225	ENST00000601453	PNMA8B	Q9ULN7	279 aa	Predicted RBP	4.36	□□□□□ -1.71
ATM-225	ENST00000601453	TCF20	Q9UGU0	1960 aa	Known RBP	4.36	□□□□□ -1.71
ATM-225	ENST00000601453	ANKRD62	A6NC57	917 aa		4.35	□□□□□ -1.71
ATM-225	ENST00000601453	C16orf96	A6NNT2	1141 aa		4.35	□□□□□ -1.71
ATM-225	ENST00000601453	MARCH6	O60337	910 aa		4.35	□□□□□ -1.71
ATM-225	ENST00000601453	RASSF9	O75901	435 aa		4.35	□□□□□ -1.71
ATM-225	ENST00000601453	MBP	P02686	304 aa	Predicted RBP	4.35	□□□□□ -1.71
ATM-225	ENST00000601453	P2RX3	P56373	397 aa		4.35	□□□□□ -1.71
ATM-225	ENST00000601453	WDR5	P61964	334 aa	Known RBP	4.35	□□□□□ -1.71
ATM-225	ENST00000601453	FHL3	Q13643	280 aa		4.35	□□□□□ -1.71
ATM-225	ENST00000601453	CLCA4	Q14CN2	919 aa		4.35	□□□□□ -1.71
ATM-225	ENST00000601453	RBM44	Q6ZP01	1051 aa	Known RBP	4.35	□□□□□ -1.71
ATM-225	ENST00000601453	MSI2	Q96DH6	328 aa	Known RBP	4.35	□□□□□ -1.71
ATM-225	ENST00000601453	HOOK2	Q96ED9	719 aa		4.35	□□□□□ -1.71
ATM-225	ENST00000601453	AIFM3	Q96NN9	605 aa		4.35	□□□□□ -1.71
ATM-225	ENST00000601453	ACO2	Q99798	780 aa	Known RBP	4.35	□□□□□ -1.71
ATM-225	ENST00000601453	MYLK2	Q9H1R3	596 aa		4.35	□□□□□ -1.71
ATM-225	ENST00000601453	FAM83D	Q9H4H8	585 aa		4.35	□□□□□ -1.71
ATM-225	ENST00000601453	NMRK2	Q9NPI5	230 aa		4.35	□□□□□ -1.71
ATM-225	ENST00000601453	AASDHPPT	Q9NRN7	309 aa		4.35	□□□□□ -1.71
ATM-225	ENST00000601453	VPS45	Q9NRW7	570 aa		4.35	□□□□□ -1.71
ATM-225	ENST00000601453	STK32B	Q9NY57	414 aa		4.35	□□□□□ -1.71
ATM-225	ENST00000601453		A0A0G2JK05	382 aa		4.34	□□□□□ -1.71
ATM-225	ENST00000601453		A0A1W2PPC1	479 aa		4.34	□□□□□ -1.71
ATM-225	ENST00000601453	AQP7P3	A6NL99	342 aa		4.34	□□□□□ -1.71
ATM-225	ENST00000601453	IFITM10	A6NMD0	228 aa		4.34	□□□□□ -1.71
ATM-225	ENST00000601453	ACOT8	O14734	319 aa		4.34	□□□□□ -1.71
ATM-225	ENST00000601453	CA12	O43570	354 aa		4.34	□□□□□ -1.71
ATM-225	ENST00000601453	ZC3H11A	O75152	810 aa	Known RBP eCLIP	4.34	□□□□□ -1.71
ATM-225	ENST00000601453	CT47B1	P0C2W7	299 aa	Predicted RBP	4.34	□□□□□ -1.71
ATM-225	ENST00000601453	KRT10	P13645	584 aa		4.34	□□□□□ -1.71
ATM-225	ENST00000601453	HSPA6	P17066	643 aa		4.34	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms