RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 STON1Q9Y6Q2 735 aa16.42■□□□□ 0.22
LIG1-214ENST00000597146 SLC26A4O43511 780 aa16.41■□□□□ 0.22
LIG1-214ENST00000597146 TYRP14679 529 aa16.41■□□□□ 0.22
LIG1-214ENST00000597146 JUPP14923 745 aa16.41■□□□□ 0.22
LIG1-214ENST00000597146 POU5F1Q01860 360 aaKnown RBP16.41■□□□□ 0.22
LIG1-214ENST00000597146 TLE3Q04726 772 aa16.41■□□□□ 0.22
LIG1-214ENST00000597146 CCDC173Q0VFZ6 552 aa16.41■□□□□ 0.22
LIG1-214ENST00000597146 MAPRE1Q15691 268 aaKnown RBP16.41■□□□□ 0.22
LIG1-214ENST00000597146 TAF1BQ53T94 588 aaPredicted RBP16.41■□□□□ 0.22
LIG1-214ENST00000597146 TPGS1Q6ZTW0 290 aa16.41■□□□□ 0.22
LIG1-214ENST00000597146 FBXO32Q969P5 355 aa16.41■□□□□ 0.22
LIG1-214ENST00000597146 SNX21Q969T3 373 aa16.41■□□□□ 0.22
LIG1-214ENST00000597146 BBS2Q9BXC9 721 aa16.41■□□□□ 0.22
LIG1-214ENST00000597146 ZSCAN16Q9H4T2 348 aaPredicted RBP16.41■□□□□ 0.22
LIG1-214ENST00000597146 CCDC39Q9UFE4 941 aa16.41■□□□□ 0.22
LIG1-214ENST00000597146 H0Y8X5 98 aa16.4■□□□□ 0.22
LIG1-214ENST00000597146 ERVH48-1M5A8F1 160 aa16.4■□□□□ 0.22
LIG1-214ENST00000597146 GFRA2O00451 464 aa16.4■□□□□ 0.22
LIG1-214ENST00000597146 STX6O43752 255 aa16.4■□□□□ 0.22
LIG1-214ENST00000597146 TBCAO75347 108 aaKnown RBP16.4■□□□□ 0.22
LIG1-214ENST00000597146 HNF1BP35680 557 aa16.4■□□□□ 0.22
LIG1-214ENST00000597146 TXLNAP40222 546 aa16.4■□□□□ 0.22
LIG1-214ENST00000597146 AFF3P51826 1226 aaKnown RBP16.4■□□□□ 0.22
LIG1-214ENST00000597146 TARDBPQ13148 414 aaKnown RBP eCLIP16.4■□□□□ 0.22
LIG1-214ENST00000597146 STARD3Q14849 445 aa16.4■□□□□ 0.22
LIG1-214ENST00000597146 KCNT1Q5JUK3 1230 aa16.4■□□□□ 0.22
LIG1-214ENST00000597146 HS2ST1Q7LGA3 356 aa16.4■□□□□ 0.22
LIG1-214ENST00000597146 FAM124AQ86V42 546 aa16.4■□□□□ 0.22
LIG1-214ENST00000597146 FMNL3Q8IVF7 1028 aa16.4■□□□□ 0.22
LIG1-214ENST00000597146 MYCBPAPQ8TBZ2 947 aa16.4■□□□□ 0.22
LIG1-214ENST00000597146 BHMTQ93088 406 aa16.4■□□□□ 0.22
LIG1-214ENST00000597146 XPO6Q96QU8 1125 aaKnown RBP16.4■□□□□ 0.22
LIG1-214ENST00000597146 HNRNPABQ99729 332 aaKnown RBP16.4■□□□□ 0.22
LIG1-214ENST00000597146 ARID3AQ99856 593 aa16.4■□□□□ 0.22
LIG1-214ENST00000597146 ZNF518BQ9C0D4 1074 aa16.4■□□□□ 0.22
LIG1-214ENST00000597146 RBAKQ9NYW8 714 aaPredicted RBP16.4■□□□□ 0.22
LIG1-214ENST00000597146 ANKRD6Q9Y2G4 727 aa16.4■□□□□ 0.22
LIG1-214ENST00000597146 CLIC4Q9Y696 253 aa16.4■□□□□ 0.22
LIG1-214ENST00000597146 UBR5O95071 2799 aaPredicted RBP16.4■□□□□ 0.22
LIG1-214ENST00000597146 CAPN8A6NHC0 703 aa16.39■□□□□ 0.21
LIG1-214ENST00000597146 PCDHGA12O60330 932 aa16.39■□□□□ 0.21
LIG1-214ENST00000597146 WARSP23381 471 aaKnown RBP16.39■□□□□ 0.21
LIG1-214ENST00000597146 YWHAQP27348 245 aa16.39■□□□□ 0.21
LIG1-214ENST00000597146 IL12RB1P42701 662 aa16.39■□□□□ 0.21
LIG1-214ENST00000597146 DGKGP49619 791 aa16.39■□□□□ 0.21
LIG1-214ENST00000597146 RBP5P82980 135 aa16.39■□□□□ 0.21
LIG1-214ENST00000597146 KCNC4Q03721 635 aa16.39■□□□□ 0.21
LIG1-214ENST00000597146 KCNA1Q09470 495 aa16.39■□□□□ 0.21
LIG1-214ENST00000597146 DNAJC3Q13217 504 aa16.39■□□□□ 0.21
LIG1-214ENST00000597146 HECTD3Q5T447 861 aa16.39■□□□□ 0.21
LIG1-214ENST00000597146 LIMS2Q7Z4I7 341 aa16.39■□□□□ 0.21
LIG1-214ENST00000597146 TMPRSS6Q8IU80 811 aa16.39■□□□□ 0.21
LIG1-214ENST00000597146 SPACA3Q8IXA5 215 aa16.39■□□□□ 0.21
LIG1-214ENST00000597146 ENGASEQ8NFI3 743 aa16.39■□□□□ 0.21
LIG1-214ENST00000597146 CACTINQ8WUQ7 758 aaKnown RBP16.39■□□□□ 0.21
LIG1-214ENST00000597146 P2RY11Q96G91 374 aa16.39■□□□□ 0.21
LIG1-214ENST00000597146 DUSP9Q99956 384 aaKnown RBP16.39■□□□□ 0.21
LIG1-214ENST00000597146 CHORDC1Q9UHD1 332 aaPredicted RBP16.39■□□□□ 0.21
LIG1-214ENST00000597146 PTPRJQ12913 1337 aa16.39■□□□□ 0.21
LIG1-214ENST00000597146 GOLGA8IPA6NC78 632 aa16.38■□□□□ 0.21
LIG1-214ENST00000597146 GOLGA8JA6NMD2 632 aa16.38■□□□□ 0.21
LIG1-214ENST00000597146 CLDN5O00501 218 aa16.38■□□□□ 0.21
LIG1-214ENST00000597146 GREM1O60565 184 aa16.38■□□□□ 0.21
LIG1-214ENST00000597146 CISD3P0C7P0 127 aa16.38■□□□□ 0.21
LIG1-214ENST00000597146 PDIA4P13667 645 aaKnown RBP16.38■□□□□ 0.21
LIG1-214ENST00000597146 MCM6Q14566 821 aa16.38■□□□□ 0.21
LIG1-214ENST00000597146 HES3Q5TGS1 186 aa16.38■□□□□ 0.21
LIG1-214ENST00000597146 FOXD4L5Q5VV16 416 aaPredicted RBP16.38■□□□□ 0.21
LIG1-214ENST00000597146 FAM173BQ6P4H8 233 aa16.38■□□□□ 0.21
LIG1-214ENST00000597146 USP49Q70CQ1 688 aa16.38■□□□□ 0.21
LIG1-214ENST00000597146 GATAD2AQ86YP4 633 aa16.38■□□□□ 0.21
LIG1-214ENST00000597146 PDZD8Q8NEN9 1154 aa16.38■□□□□ 0.21
LIG1-214ENST00000597146 SCAMP5Q8TAC9 235 aa16.38■□□□□ 0.21
LIG1-214ENST00000597146 NOC3LQ8WTT2 800 aaKnown RBP16.38■□□□□ 0.21
LIG1-214ENST00000597146 FOXD4L4Q8WXT5 416 aaPredicted RBP16.38■□□□□ 0.21
LIG1-214ENST00000597146 IGSF8Q969P0 613 aa16.38■□□□□ 0.21
LIG1-214ENST00000597146 SIPA1Q96FS4 1042 aa16.38■□□□□ 0.21
LIG1-214ENST00000597146 HPDLQ96IR7 371 aa16.38■□□□□ 0.21
LIG1-214ENST00000597146 ZNF396Q96N95 335 aaPredicted RBP16.38■□□□□ 0.21
LIG1-214ENST00000597146 MRPL45Q9BRJ2 306 aaKnown RBP16.38■□□□□ 0.21
LIG1-214ENST00000597146 DPEP3Q9H4B8 488 aa16.38■□□□□ 0.21
LIG1-214ENST00000597146 C6orf106Q9H6K1 298 aaPredicted RBP16.38■□□□□ 0.21
LIG1-214ENST00000597146 PDE11AQ9HCR9 933 aa16.38■□□□□ 0.21
LIG1-214ENST00000597146 TM9SF3Q9HD45 589 aa16.38■□□□□ 0.21
LIG1-214ENST00000597146 BLOC1S4Q9NUP1 217 aa16.38■□□□□ 0.21
LIG1-214ENST00000597146 PLK2Q9NYY3 685 aa16.38■□□□□ 0.21
LIG1-214ENST00000597146 MARK1Q9P0L2 795 aa16.38■□□□□ 0.21
LIG1-214ENST00000597146 TEX15Q9BXT5 2789 aa16.37■□□□□ 0.21
LIG1-214ENST00000597146 BRINP1O60477 761 aa16.37■□□□□ 0.21
LIG1-214ENST00000597146 RFPL3O75679 317 aa16.37■□□□□ 0.21
LIG1-214ENST00000597146 IGLV3-19P01714 112 aa16.37■□□□□ 0.21
LIG1-214ENST00000597146 TMEM191BP0C7N4 346 aa16.37■□□□□ 0.21
LIG1-214ENST00000597146 OXTRP30559 389 aa16.37■□□□□ 0.21
LIG1-214ENST00000597146 DDIT3P35638 169 aa16.37■□□□□ 0.21
LIG1-214ENST00000597146 PGFP49763 221 aa16.37■□□□□ 0.21
LIG1-214ENST00000597146 COPAP53621 1224 aa16.37■□□□□ 0.21
LIG1-214ENST00000597146 LY6DQ14210 128 aa16.37■□□□□ 0.21
LIG1-214ENST00000597146 RTP5Q14D33 572 aa16.37■□□□□ 0.21
LIG1-214ENST00000597146 STK38Q15208 465 aa16.37■□□□□ 0.21
LIG1-214ENST00000597146 DPH6Q7L8W6 267 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms