RNA–Protein interactions for RNA: ENST00000596676.2

SMCO4-206, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 BASIC

Gene SMCO4, Length 180 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-206ENST00000596676 SLC2A13Q96QE2 648 aa16.22■□□□□ 0.19
SMCO4-206ENST00000596676 KLF16Q9BXK1 252 aaPredicted RBP16.22■□□□□ 0.19
SMCO4-206ENST00000596676 CD320Q9NPF0 282 aa16.22■□□□□ 0.19
SMCO4-206ENST00000596676 ABCC13Q9NSE7 274 aa16.22■□□□□ 0.19
SMCO4-206ENST00000596676 GDE1Q9NZC3 331 aa16.22■□□□□ 0.19
SMCO4-206ENST00000596676 EPS15L1Q9UBC2 864 aa16.22■□□□□ 0.19
SMCO4-206ENST00000596676 CNOT8Q9UFF9 292 aaKnown RBP16.22■□□□□ 0.19
SMCO4-206ENST00000596676 REXO2Q9Y3B8 237 aaKnown RBP16.22■□□□□ 0.19
SMCO4-206ENST00000596676 MYO10Q9HD67 2058 aa16.22■□□□□ 0.19
SMCO4-206ENST00000596676 SYNJ2BP-COX16A0A087WUM0 186 aa16.21■□□□□ 0.19
SMCO4-206ENST00000596676 A0A0U1RQJ8 604 aa16.21■□□□□ 0.19
SMCO4-206ENST00000596676 GOLGA6L6A8MZA4 724 aa16.21■□□□□ 0.19
SMCO4-206ENST00000596676 DAB1O75553 588 aa16.21■□□□□ 0.19
SMCO4-206ENST00000596676 RFC1P35251 1148 aaPredicted RBP16.21■□□□□ 0.19
SMCO4-206ENST00000596676 ATP5C1P36542 298 aaKnown RBP16.21■□□□□ 0.19
SMCO4-206ENST00000596676 AVPR1AP37288 418 aa16.21■□□□□ 0.19
SMCO4-206ENST00000596676 PSEN1P49768 467 aa16.21■□□□□ 0.19
SMCO4-206ENST00000596676 GSDMDP57764 484 aa16.21■□□□□ 0.19
SMCO4-206ENST00000596676 SNX16P57768 344 aa16.21■□□□□ 0.19
SMCO4-206ENST00000596676 OGDHQ02218 1023 aa16.21■□□□□ 0.19
SMCO4-206ENST00000596676 ZP2Q05996 745 aa16.21■□□□□ 0.19
SMCO4-206ENST00000596676 DCAF6Q58WW2 860 aa16.21■□□□□ 0.19
SMCO4-206ENST00000596676 PPP1R15BQ5SWA1 713 aa16.21■□□□□ 0.19
SMCO4-206ENST00000596676 SH3PXD2AQ5TCZ1 1133 aa16.21■□□□□ 0.19
SMCO4-206ENST00000596676 OTUD1Q5VV17 481 aaPredicted RBP16.21■□□□□ 0.19
SMCO4-206ENST00000596676 DNAJC24Q6P3W2 148 aa16.21■□□□□ 0.19
SMCO4-206ENST00000596676 TOGARAM2Q6ZUX3 1019 aa16.21■□□□□ 0.19
SMCO4-206ENST00000596676 TAC4Q86UU9 113 aa16.21■□□□□ 0.19
SMCO4-206ENST00000596676 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.21■□□□□ 0.19
SMCO4-206ENST00000596676 LRRC8AQ8IWT6 810 aa16.21■□□□□ 0.19
SMCO4-206ENST00000596676 ADHFE1Q8IWW8 467 aa16.21■□□□□ 0.19
SMCO4-206ENST00000596676 ACRBPQ8NEB7 543 aa16.21■□□□□ 0.19
SMCO4-206ENST00000596676 DQX1Q8TE96 717 aaKnown RBP16.21■□□□□ 0.19
SMCO4-206ENST00000596676 SH3RF2Q8TEC5 729 aa16.21■□□□□ 0.19
SMCO4-206ENST00000596676 RNF139Q8WU17 664 aa16.21■□□□□ 0.19
SMCO4-206ENST00000596676 RXFP2Q8WXD0 754 aa16.21■□□□□ 0.19
SMCO4-206ENST00000596676 ATRIPQ8WXE1 791 aa16.21■□□□□ 0.19
SMCO4-206ENST00000596676 SMARCD2Q92925 531 aa16.21■□□□□ 0.19
SMCO4-206ENST00000596676 ACSF2Q96CM8 615 aaPredicted RBP16.21■□□□□ 0.19
SMCO4-206ENST00000596676 POPDC2Q9HBU9 364 aa16.21■□□□□ 0.19
SMCO4-206ENST00000596676 TDP1Q9NUW8 608 aa16.21■□□□□ 0.19
SMCO4-206ENST00000596676 ASNSD1Q9NWL6 643 aa16.21■□□□□ 0.19
SMCO4-206ENST00000596676 COX16Q9P0S2 106 aa16.21■□□□□ 0.19
SMCO4-206ENST00000596676 FAM50BQ9Y247 325 aa16.21■□□□□ 0.19
SMCO4-206ENST00000596676 USTQ9Y2C2 406 aa16.21■□□□□ 0.19
SMCO4-206ENST00000596676 EPN1Q9Y6I3 576 aaPredicted RBP16.21■□□□□ 0.19
SMCO4-206ENST00000596676 NUMBLQ9Y6R0 609 aa16.21■□□□□ 0.19
SMCO4-206ENST00000596676 SLC12A8A0AV02 714 aa16.2■□□□□ 0.18
SMCO4-206ENST00000596676 HEPACAM2A8MVW5 462 aa16.2■□□□□ 0.18
SMCO4-206ENST00000596676 LEFTY2O00292 366 aa16.2■□□□□ 0.18
SMCO4-206ENST00000596676 CAPN9O14815 690 aa16.2■□□□□ 0.18
SMCO4-206ENST00000596676 SART1O43290 800 aaKnown RBP16.2■□□□□ 0.18
SMCO4-206ENST00000596676 HSF2BPO75031 334 aa16.2■□□□□ 0.18
SMCO4-206ENST00000596676 NDUFA10O95299 355 aa16.2■□□□□ 0.18
SMCO4-206ENST00000596676 KRT3P12035 628 aa16.2■□□□□ 0.18
SMCO4-206ENST00000596676 DDX6P26196 483 aaKnown RBP eCLIP16.2■□□□□ 0.18
SMCO4-206ENST00000596676 TUBP50607 506 aa16.2■□□□□ 0.18
SMCO4-206ENST00000596676 ATXN1P54253 815 aaKnown RBP16.2■□□□□ 0.18
SMCO4-206ENST00000596676 SLC7A9P82251 487 aa16.2■□□□□ 0.18
SMCO4-206ENST00000596676 CCZ1BP86790 482 aa16.2■□□□□ 0.18
SMCO4-206ENST00000596676 CCZ1P86791 482 aaPredicted RBP16.2■□□□□ 0.18
SMCO4-206ENST00000596676 MAMLD1Q13495 774 aa16.2■□□□□ 0.18
SMCO4-206ENST00000596676 HTR4Q13639 388 aa16.2■□□□□ 0.18
SMCO4-206ENST00000596676 GRM2Q14416 872 aa16.2■□□□□ 0.18
SMCO4-206ENST00000596676 C15orf59Q2T9L4 293 aaPredicted RBP16.2■□□□□ 0.18
SMCO4-206ENST00000596676 PLEKHA7Q6IQ23 1121 aa16.2■□□□□ 0.18
SMCO4-206ENST00000596676 VITQ6UXI7 678 aa16.2■□□□□ 0.18
SMCO4-206ENST00000596676 ZDHHC17Q8IUH5 632 aa16.2■□□□□ 0.18
SMCO4-206ENST00000596676 C3orf20Q8ND61 904 aa16.2■□□□□ 0.18
SMCO4-206ENST00000596676 GOLGA1Q92805 767 aa16.2■□□□□ 0.18
SMCO4-206ENST00000596676 VCPIP1Q96JH7 1222 aa16.2■□□□□ 0.18
SMCO4-206ENST00000596676 CFAP57Q96MR6 1250 aa16.2■□□□□ 0.18
SMCO4-206ENST00000596676 MCEEQ96PE7 176 aa16.2■□□□□ 0.18
SMCO4-206ENST00000596676 TBCBQ99426 244 aa16.2■□□□□ 0.18
SMCO4-206ENST00000596676 DESI2Q9BSY9 194 aa16.2■□□□□ 0.18
SMCO4-206ENST00000596676 SELENOOQ9BVL4 669 aa16.2■□□□□ 0.18
SMCO4-206ENST00000596676 NACA2Q9H009 215 aa16.2■□□□□ 0.18
SMCO4-206ENST00000596676 SMOC2Q9H3U7 446 aa16.2■□□□□ 0.18
SMCO4-206ENST00000596676 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.2■□□□□ 0.18
SMCO4-206ENST00000596676 MARCH2Q9P0N8 246 aa16.2■□□□□ 0.18
SMCO4-206ENST00000596676 WDR35Q9P2L0 1181 aa16.2■□□□□ 0.18
SMCO4-206ENST00000596676 DNMT3LQ9UJW3 386 aa16.2■□□□□ 0.18
SMCO4-206ENST00000596676 STRIP2Q9ULQ0 834 aa16.2■□□□□ 0.18
SMCO4-206ENST00000596676 NR2E1Q9Y466 385 aa16.2■□□□□ 0.18
SMCO4-206ENST00000596676 NUP210Q8TEM1 1887 aaPredicted RBP16.2■□□□□ 0.18
SMCO4-206ENST00000596676 HELZP42694 1942 aaKnown RBP16.19■□□□□ 0.18
SMCO4-206ENST00000596676 RCCD1A6NED2 376 aa16.19■□□□□ 0.18
SMCO4-206ENST00000596676 SIGLEC16A6NMB1 481 aa16.19■□□□□ 0.18
SMCO4-206ENST00000596676 EIF3CLB5ME19 914 aaKnown RBP16.19■□□□□ 0.18
SMCO4-206ENST00000596676 ANHXE9PGG2 379 aa16.19■□□□□ 0.18
SMCO4-206ENST00000596676 LCA5LO95447 670 aa16.19■□□□□ 0.18
SMCO4-206ENST00000596676 GLI1P08151 1106 aa16.19■□□□□ 0.18
SMCO4-206ENST00000596676 H2AFZP0C0S5 128 aa16.19■□□□□ 0.18
SMCO4-206ENST00000596676 MATKP42679 507 aa16.19■□□□□ 0.18
SMCO4-206ENST00000596676 MAGEA1P43355 309 aa16.19■□□□□ 0.18
SMCO4-206ENST00000596676 GSCP56915 257 aaPredicted RBP16.19■□□□□ 0.18
SMCO4-206ENST00000596676 MSANTD2Q6P1R3 559 aa16.19■□□□□ 0.18
SMCO4-206ENST00000596676 H2AFVQ71UI9 128 aa16.19■□□□□ 0.18
SMCO4-206ENST00000596676 CCDC170Q8IYT3 715 aa16.19■□□□□ 0.18
SMCO4-206ENST00000596676 ZDHHC14Q8IZN3 488 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms